RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RIMS2Q9UQ26 1411 aa13.13□□□□□ -0.31
ACTN1-213ENST00000554508 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-213ENST00000554508 BCANQ96GW7 911 aa13.12□□□□□ -0.31
ACTN1-213ENST00000554508 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
ACTN1-213ENST00000554508 KCNA6P17658 529 aa13.11□□□□□ -0.31
ACTN1-213ENST00000554508 TRIM52Q96A61 297 aa13.11□□□□□ -0.31
ACTN1-213ENST00000554508 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
ACTN1-213ENST00000554508 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
ACTN1-213ENST00000554508 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
ACTN1-213ENST00000554508 KIF1BO60333 1816 aa13.09□□□□□ -0.31
ACTN1-213ENST00000554508 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
ACTN1-213ENST00000554508 TBX22Q9Y458 520 aa13.08□□□□□ -0.32
ACTN1-213ENST00000554508 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
ACTN1-213ENST00000554508 ACIN1Q9UKV3 1341 aaKnown RBP13.08□□□□□ -0.32
ACTN1-213ENST00000554508 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
ACTN1-213ENST00000554508 PROSER2Q86WR7 435 aaPredicted RBP13.06□□□□□ -0.32
ACTN1-213ENST00000554508 TRPM2O94759 1503 aa13.06□□□□□ -0.32
ACTN1-213ENST00000554508 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
ACTN1-213ENST00000554508 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
ACTN1-213ENST00000554508 NKTRP30414 1462 aaKnown RBP13.05□□□□□ -0.32
ACTN1-213ENST00000554508 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
ACTN1-213ENST00000554508 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
ACTN1-213ENST00000554508 CLTCL1P53675 1640 aa13.05□□□□□ -0.32
ACTN1-213ENST00000554508 NUTM2DQ5VT03 806 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-213ENST00000554508 TMEM94Q12767 1356 aa13.04□□□□□ -0.32
ACTN1-213ENST00000554508 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
ACTN1-213ENST00000554508 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
ACTN1-213ENST00000554508 HSPA1LP34931 641 aa13.02□□□□□ -0.33
ACTN1-213ENST00000554508 SENP3Q9H4L4 574 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-213ENST00000554508 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
ACTN1-213ENST00000554508 MPHOSPH9Q99550 1183 aa13□□□□□ -0.33
ACTN1-213ENST00000554508 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 NEXMIFQ5QGS0 1516 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 MSH6P52701 1360 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
ACTN1-213ENST00000554508 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
ACTN1-213ENST00000554508 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-213ENST00000554508 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
ACTN1-213ENST00000554508 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
ACTN1-213ENST00000554508 FOXD1Q16676 465 aa12.96□□□□□ -0.33
ACTN1-213ENST00000554508 PPLO60437 1756 aa12.96□□□□□ -0.34
ACTN1-213ENST00000554508 CCDC144AA2RUR9 1427 aa12.95□□□□□ -0.34
ACTN1-213ENST00000554508 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
ACTN1-213ENST00000554508 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
ACTN1-213ENST00000554508 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
ACTN1-213ENST00000554508 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
ACTN1-213ENST00000554508 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
ACTN1-213ENST00000554508 ROBO1Q9Y6N7 1651 aa12.93□□□□□ -0.34
ACTN1-213ENST00000554508 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-213ENST00000554508 RAB3GAP2Q9H2M9 1393 aa12.93□□□□□ -0.34
ACTN1-213ENST00000554508 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
ACTN1-213ENST00000554508 METP08581 1390 aa12.92□□□□□ -0.34
ACTN1-213ENST00000554508 ATF3P18847 181 aa12.91□□□□□ -0.34
ACTN1-213ENST00000554508 HRCP23327 699 aa12.91□□□□□ -0.34
ACTN1-213ENST00000554508 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
ACTN1-213ENST00000554508 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.35
ACTN1-213ENST00000554508 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
ACTN1-213ENST00000554508 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
ACTN1-213ENST00000554508 RGL3Q3MIN7 710 aa12.89□□□□□ -0.35
ACTN1-213ENST00000554508 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
ACTN1-213ENST00000554508 DCCP43146 1447 aa12.88□□□□□ -0.35
ACTN1-213ENST00000554508 ILDR2Q71H61 639 aa12.87□□□□□ -0.35
ACTN1-213ENST00000554508 PHLPP1O60346 1717 aa12.87□□□□□ -0.35
ACTN1-213ENST00000554508 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
ACTN1-213ENST00000554508 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
ACTN1-213ENST00000554508 ADGRF5Q8IZF2 1346 aa12.85□□□□□ -0.35
ACTN1-213ENST00000554508 ADGRL3Q9HAR2 1447 aa12.84□□□□□ -0.35
ACTN1-213ENST00000554508 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
ACTN1-213ENST00000554508 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-213ENST00000554508 ROBO2Q9HCK4 1378 aa12.81□□□□□ -0.36
ACTN1-213ENST00000554508 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-213ENST00000554508 MST1RQ04912 1400 aa12.81□□□□□ -0.36
ACTN1-213ENST00000554508 BRINP3Q76B58 766 aa12.81□□□□□ -0.36
ACTN1-213ENST00000554508 JCADQ9P266 1359 aa12.81□□□□□ -0.36
ACTN1-213ENST00000554508 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-213ENST00000554508 PIK3C2GO75747 1445 aa12.8□□□□□ -0.36
ACTN1-213ENST00000554508 SOCS7O14512 581 aa12.8□□□□□ -0.36
ACTN1-213ENST00000554508 MYOM2P54296 1465 aa12.79□□□□□ -0.36
ACTN1-213ENST00000554508 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
ACTN1-213ENST00000554508 C14orf93Q9H972 538 aaKnown RBP12.79□□□□□ -0.36
ACTN1-213ENST00000554508 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
ACTN1-213ENST00000554508 ABCC11Q96J66 1382 aa12.79□□□□□ -0.36
ACTN1-213ENST00000554508 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
ACTN1-213ENST00000554508 TECPR2O15040 1411 aa12.79□□□□□ -0.36
ACTN1-213ENST00000554508 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
ACTN1-213ENST00000554508 LAMC1P11047 1609 aa12.78□□□□□ -0.36
ACTN1-213ENST00000554508 TMEM132EQ6IEE7 984 aa12.78□□□□□ -0.36
ACTN1-213ENST00000554508 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
ACTN1-213ENST00000554508 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.36
ACTN1-213ENST00000554508 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
ACTN1-213ENST00000554508 STK26Q9P289 416 aa12.77□□□□□ -0.37
ACTN1-213ENST00000554508 SHPRHQ149N8 1683 aa12.77□□□□□ -0.37
ACTN1-213ENST00000554508 SPATA31A6Q5VVP1 1343 aa12.76□□□□□ -0.37
ACTN1-213ENST00000554508 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
ACTN1-213ENST00000554508 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
ACTN1-213ENST00000554508 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
ACTN1-213ENST00000554508 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms