RNA–Protein interactions for RNA: ENST00000554333.1

CRAT37-201, humanhuman

TSL 1 (best) BASIC

Gene CRAT37, Length 2,140 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT37-201ENST00000554333 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
CRAT37-201ENST00000554333 BCANQ96GW7 911 aa16.25■□□□□ 0.19
CRAT37-201ENST00000554333 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
CRAT37-201ENST00000554333 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
CRAT37-201ENST00000554333 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
CRAT37-201ENST00000554333 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
CRAT37-201ENST00000554333 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
CRAT37-201ENST00000554333 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
CRAT37-201ENST00000554333 KIF1BO60333 1816 aa16.2■□□□□ 0.18
CRAT37-201ENST00000554333 CPS1P31327 1500 aa16.19■□□□□ 0.18
CRAT37-201ENST00000554333 HDGFP51858 240 aaKnown RBP16.18■□□□□ 0.18
CRAT37-201ENST00000554333 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
CRAT37-201ENST00000554333 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.18■□□□□ 0.18
CRAT37-201ENST00000554333 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
CRAT37-201ENST00000554333 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
CRAT37-201ENST00000554333 CCDC144AA2RUR9 1427 aa16.14■□□□□ 0.17
CRAT37-201ENST00000554333 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.17
CRAT37-201ENST00000554333 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
CRAT37-201ENST00000554333 RBM33Q96EV2 1170 aaKnown RBP16.12■□□□□ 0.17
CRAT37-201ENST00000554333 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
CRAT37-201ENST00000554333 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
CRAT37-201ENST00000554333 KCNA6P17658 529 aa16.1■□□□□ 0.17
CRAT37-201ENST00000554333 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
CRAT37-201ENST00000554333 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
CRAT37-201ENST00000554333 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
CRAT37-201ENST00000554333 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
CRAT37-201ENST00000554333 CHD2O14647 1828 aaKnown RBP16.09■□□□□ 0.17
CRAT37-201ENST00000554333 TBX22Q9Y458 520 aa16.09■□□□□ 0.17
CRAT37-201ENST00000554333 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
CRAT37-201ENST00000554333 PROSER2Q86WR7 435 aaPredicted RBP16.08■□□□□ 0.16
CRAT37-201ENST00000554333 DIP2AQ14689 1571 aa16.08■□□□□ 0.16
CRAT37-201ENST00000554333 NWD1Q149M9 1564 aa16.08■□□□□ 0.16
CRAT37-201ENST00000554333 PPLO60437 1756 aa16.08■□□□□ 0.16
CRAT37-201ENST00000554333 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
CRAT37-201ENST00000554333 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
CRAT37-201ENST00000554333 SPATA31E1Q6ZUB1 1445 aa16.06■□□□□ 0.16
CRAT37-201ENST00000554333 HRCP23327 699 aa16.06■□□□□ 0.16
CRAT37-201ENST00000554333 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
CRAT37-201ENST00000554333 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
CRAT37-201ENST00000554333 TOM1O60784 492 aa16.05■□□□□ 0.16
CRAT37-201ENST00000554333 ALKQ9UM73 1620 aa16.04■□□□□ 0.16
CRAT37-201ENST00000554333 METP08581 1390 aa16.04■□□□□ 0.16
CRAT37-201ENST00000554333 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
CRAT37-201ENST00000554333 PTPRUQ92729 1446 aa16.04■□□□□ 0.16
CRAT37-201ENST00000554333 ANKRD30BQ9BXX2 1392 aa16.03■□□□□ 0.16
CRAT37-201ENST00000554333 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
CRAT37-201ENST00000554333 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
CRAT37-201ENST00000554333 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.15
CRAT37-201ENST00000554333 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
CRAT37-201ENST00000554333 C14orf37Q86TY3 774 aa16■□□□□ 0.15
CRAT37-201ENST00000554333 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
CRAT37-201ENST00000554333 XRN1Q8IZH2 1706 aaKnown RBP15.99■□□□□ 0.15
CRAT37-201ENST00000554333 MSH6P52701 1360 aa15.97■□□□□ 0.15
CRAT37-201ENST00000554333 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
CRAT37-201ENST00000554333 HSPA1LP34931 641 aa15.95■□□□□ 0.14
CRAT37-201ENST00000554333 PIK3C2GO75747 1445 aa15.93■□□□□ 0.14
CRAT37-201ENST00000554333 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
CRAT37-201ENST00000554333 KDM2AQ9Y2K7 1162 aa15.92■□□□□ 0.14
CRAT37-201ENST00000554333 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
CRAT37-201ENST00000554333 DCAF11Q8TEB1 546 aa15.91■□□□□ 0.14
CRAT37-201ENST00000554333 STK26Q9P289 416 aa15.91■□□□□ 0.14
CRAT37-201ENST00000554333 MYOM2P54296 1465 aa15.91■□□□□ 0.14
CRAT37-201ENST00000554333 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
CRAT37-201ENST00000554333 C19orf44Q9H6X5 657 aa15.91■□□□□ 0.14
CRAT37-201ENST00000554333 ROBO1Q9Y6N7 1651 aa15.9■□□□□ 0.14
CRAT37-201ENST00000554333 NCOA3Q9Y6Q9 1424 aa15.9■□□□□ 0.14
CRAT37-201ENST00000554333 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
CRAT37-201ENST00000554333 ASXL1Q8IXJ9 1541 aa15.9■□□□□ 0.14
CRAT37-201ENST00000554333 ATF3P18847 181 aa15.89■□□□□ 0.13
CRAT37-201ENST00000554333 NALCNQ8IZF0 1738 aa15.89■□□□□ 0.13
CRAT37-201ENST00000554333 CFAP70Q5T0N1 1121 aa15.89■□□□□ 0.13
CRAT37-201ENST00000554333 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
CRAT37-201ENST00000554333 NRXN1Q9ULB1 1477 aa15.89■□□□□ 0.13
CRAT37-201ENST00000554333 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
CRAT37-201ENST00000554333 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
CRAT37-201ENST00000554333 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
CRAT37-201ENST00000554333 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
CRAT37-201ENST00000554333 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
CRAT37-201ENST00000554333 C14orf93Q9H972 538 aaKnown RBP15.86■□□□□ 0.13
CRAT37-201ENST00000554333 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
CRAT37-201ENST00000554333 LAMC1P11047 1609 aa15.85■□□□□ 0.13
CRAT37-201ENST00000554333 YTHDC2Q9H6S0 1430 aaKnown RBP15.84■□□□□ 0.13
CRAT37-201ENST00000554333 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
CRAT37-201ENST00000554333 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
CRAT37-201ENST00000554333 NEUROD1Q13562 356 aa15.83■□□□□ 0.13
CRAT37-201ENST00000554333 PRAG1Q86YV5 1406 aa15.83■□□□□ 0.12
CRAT37-201ENST00000554333 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
CRAT37-201ENST00000554333 DCCP43146 1447 aa15.83■□□□□ 0.12
CRAT37-201ENST00000554333 KNDC1Q76NI1 1749 aa15.82■□□□□ 0.12
CRAT37-201ENST00000554333 PLEKHH1Q9ULM0 1364 aa15.82■□□□□ 0.12
CRAT37-201ENST00000554333 ABCC11Q96J66 1382 aa15.81■□□□□ 0.12
CRAT37-201ENST00000554333 TECPR2O15040 1411 aa15.81■□□□□ 0.12
CRAT37-201ENST00000554333 MST1RQ04912 1400 aa15.8■□□□□ 0.12
CRAT37-201ENST00000554333 PHLPP1O60346 1717 aa15.8■□□□□ 0.12
CRAT37-201ENST00000554333 SAFB2Q14151 953 aaKnown RBP eCLIP15.8■□□□□ 0.12
CRAT37-201ENST00000554333 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
CRAT37-201ENST00000554333 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
CRAT37-201ENST00000554333 DISP3Q9P2K9 1392 aa15.78■□□□□ 0.12
CRAT37-201ENST00000554333 PCGF6Q9BYE7 350 aa15.78■□□□□ 0.12
CRAT37-201ENST00000554333 STAC3Q96MF2 364 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms