RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
IFT43-206ENST00000554026 MED14O60244 1454 aa16.49■□□□□ 0.23
IFT43-206ENST00000554026 PCGF6Q9BYE7 350 aa16.49■□□□□ 0.23
IFT43-206ENST00000554026 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
IFT43-206ENST00000554026 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
IFT43-206ENST00000554026 NEURL4Q96JN8 1562 aa16.48■□□□□ 0.23
IFT43-206ENST00000554026 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
IFT43-206ENST00000554026 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
IFT43-206ENST00000554026 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
IFT43-206ENST00000554026 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
IFT43-206ENST00000554026 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
IFT43-206ENST00000554026 NPHP4O75161 1426 aaPredicted RBP16.46■□□□□ 0.23
IFT43-206ENST00000554026 MYO5BQ9ULV0 1848 aa16.46■□□□□ 0.23
IFT43-206ENST00000554026 ZFYVE9O95405 1425 aa16.45■□□□□ 0.22
IFT43-206ENST00000554026 LTKP29376 864 aa16.44■□□□□ 0.22
IFT43-206ENST00000554026 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
IFT43-206ENST00000554026 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
IFT43-206ENST00000554026 PLEKHG1Q9ULL1 1385 aa16.42■□□□□ 0.22
IFT43-206ENST00000554026 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
IFT43-206ENST00000554026 DHX57Q6P158 1386 aaKnown RBP16.41■□□□□ 0.22
IFT43-206ENST00000554026 SOCS7O14512 581 aa16.41■□□□□ 0.22
IFT43-206ENST00000554026 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
IFT43-206ENST00000554026 CPS1P31327 1500 aa16.4■□□□□ 0.22
IFT43-206ENST00000554026 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
IFT43-206ENST00000554026 BCANQ96GW7 911 aa16.4■□□□□ 0.22
IFT43-206ENST00000554026 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
IFT43-206ENST00000554026 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
IFT43-206ENST00000554026 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
IFT43-206ENST00000554026 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
IFT43-206ENST00000554026 PPLO60437 1756 aa16.36■□□□□ 0.21
IFT43-206ENST00000554026 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
IFT43-206ENST00000554026 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
IFT43-206ENST00000554026 NUTM2DQ5VT03 806 aaPredicted RBP16.33■□□□□ 0.2
IFT43-206ENST00000554026 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
IFT43-206ENST00000554026 MED1Q15648 1581 aaPredicted RBP16.33■□□□□ 0.2
IFT43-206ENST00000554026 IFT172Q9UG01 1749 aa16.33■□□□□ 0.2
IFT43-206ENST00000554026 MYOM2P54296 1465 aa16.32■□□□□ 0.2
IFT43-206ENST00000554026 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
IFT43-206ENST00000554026 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
IFT43-206ENST00000554026 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
IFT43-206ENST00000554026 KCNA6P17658 529 aa16.29■□□□□ 0.2
IFT43-206ENST00000554026 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
IFT43-206ENST00000554026 DCAF11Q8TEB1 546 aa16.28■□□□□ 0.2
IFT43-206ENST00000554026 ALKQ9UM73 1620 aa16.27■□□□□ 0.19
IFT43-206ENST00000554026 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.19
IFT43-206ENST00000554026 ADGRF5Q8IZF2 1346 aa16.26■□□□□ 0.19
IFT43-206ENST00000554026 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
IFT43-206ENST00000554026 NRXN1Q9ULB1 1477 aa16.26■□□□□ 0.19
IFT43-206ENST00000554026 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
IFT43-206ENST00000554026 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
IFT43-206ENST00000554026 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
IFT43-206ENST00000554026 LAMC1P11047 1609 aa16.25■□□□□ 0.19
IFT43-206ENST00000554026 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
IFT43-206ENST00000554026 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
IFT43-206ENST00000554026 PIP4K2BP78356 416 aa16.24■□□□□ 0.19
IFT43-206ENST00000554026 TOM1O60784 492 aa16.23■□□□□ 0.19
IFT43-206ENST00000554026 HSPA1LP34931 641 aa16.23■□□□□ 0.19
IFT43-206ENST00000554026 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
IFT43-206ENST00000554026 KDM2AQ9Y2K7 1162 aa16.23■□□□□ 0.19
IFT43-206ENST00000554026 TONSLQ96HA7 1378 aa16.23■□□□□ 0.19
IFT43-206ENST00000554026 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
IFT43-206ENST00000554026 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
IFT43-206ENST00000554026 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
IFT43-206ENST00000554026 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
IFT43-206ENST00000554026 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
IFT43-206ENST00000554026 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
IFT43-206ENST00000554026 METP08581 1390 aa16.2■□□□□ 0.18
IFT43-206ENST00000554026 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
IFT43-206ENST00000554026 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
IFT43-206ENST00000554026 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
IFT43-206ENST00000554026 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
IFT43-206ENST00000554026 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
IFT43-206ENST00000554026 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
IFT43-206ENST00000554026 KIAA1210Q9ULL0 1709 aa16.16■□□□□ 0.18
IFT43-206ENST00000554026 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
IFT43-206ENST00000554026 PTPRUQ92729 1446 aa16.16■□□□□ 0.18
IFT43-206ENST00000554026 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
IFT43-206ENST00000554026 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
IFT43-206ENST00000554026 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
IFT43-206ENST00000554026 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
IFT43-206ENST00000554026 TECPR2O15040 1411 aa16.14■□□□□ 0.17
IFT43-206ENST00000554026 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
IFT43-206ENST00000554026 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
IFT43-206ENST00000554026 KNDC1Q76NI1 1749 aa16.12■□□□□ 0.17
IFT43-206ENST00000554026 TMEM132EQ6IEE7 984 aa16.12■□□□□ 0.17
IFT43-206ENST00000554026 MSH6P52701 1360 aa16.12■□□□□ 0.17
IFT43-206ENST00000554026 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
IFT43-206ENST00000554026 PHF23Q9BUL5 403 aaPredicted RBP16.11■□□□□ 0.17
IFT43-206ENST00000554026 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
IFT43-206ENST00000554026 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
IFT43-206ENST00000554026 ADGRB1O14514 1584 aa16.1■□□□□ 0.17
IFT43-206ENST00000554026 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
IFT43-206ENST00000554026 STK26Q9P289 416 aa16.1■□□□□ 0.17
IFT43-206ENST00000554026 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
IFT43-206ENST00000554026 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
IFT43-206ENST00000554026 DCCP43146 1447 aa16.08■□□□□ 0.16
IFT43-206ENST00000554026 CADPS2Q86UW7 1296 aa16.07■□□□□ 0.16
IFT43-206ENST00000554026 TRPM1Q7Z4N2 1603 aa16.06■□□□□ 0.16
IFT43-206ENST00000554026 ADGRL3Q9HAR2 1447 aa16.06■□□□□ 0.16
IFT43-206ENST00000554026 ATF3P18847 181 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms