RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 ZFYVE9O95405 1425 aa30.44■■■□□ 2.46
PRAF2-202ENST00000553851 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
PRAF2-202ENST00000553851 TRIM52Q96A61 297 aa30.43■■■□□ 2.46
PRAF2-202ENST00000553851 SENP3Q9H4L4 574 aaPredicted RBP30.42■■■□□ 2.46
PRAF2-202ENST00000553851 PIP4K2BP78356 416 aa30.41■■■□□ 2.46
PRAF2-202ENST00000553851 SCAF1Q9H7N4 1312 aaKnown RBP30.4■■■□□ 2.46
PRAF2-202ENST00000553851 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.4■■■□□ 2.46
PRAF2-202ENST00000553851 PLEKHG1Q9ULL1 1385 aa30.37■■■□□ 2.45
PRAF2-202ENST00000553851 KCNA6P17658 529 aa30.37■■■□□ 2.45
PRAF2-202ENST00000553851 NUTM2DQ5VT03 806 aaPredicted RBP30.37■■■□□ 2.45
PRAF2-202ENST00000553851 SPHKAPQ2M3C7 1700 aa30.33■■■□□ 2.45
PRAF2-202ENST00000553851 SLC4A1APQ9BWU0 796 aaKnown RBP30.3■■■□□ 2.44
PRAF2-202ENST00000553851 PROSER2Q86WR7 435 aaPredicted RBP30.28■■■□□ 2.44
PRAF2-202ENST00000553851 TBX22Q9Y458 520 aa30.28■■■□□ 2.44
PRAF2-202ENST00000553851 ALKQ9UM73 1620 aa30.28■■■□□ 2.44
PRAF2-202ENST00000553851 ZNF326Q5BKZ1 582 aaKnown RBP30.27■■■□□ 2.44
PRAF2-202ENST00000553851 TMEM94Q12767 1356 aa30.26■■■□□ 2.43
PRAF2-202ENST00000553851 HSPA1LP34931 641 aa30.25■■■□□ 2.43
PRAF2-202ENST00000553851 RBM33Q96EV2 1170 aaKnown RBP30.23■■■□□ 2.43
PRAF2-202ENST00000553851 TRPM2O94759 1503 aa30.23■■■□□ 2.43
PRAF2-202ENST00000553851 XIRP1Q702N8 1843 aaKnown RBP30.23■■■□□ 2.43
PRAF2-202ENST00000553851 CLTCL1P53675 1640 aa30.22■■■□□ 2.43
PRAF2-202ENST00000553851 ADAMTS13Q76LX8 1427 aa30.21■■■□□ 2.43
PRAF2-202ENST00000553851 NWD1Q149M9 1564 aa30.2■■■□□ 2.43
PRAF2-202ENST00000553851 NKTRP30414 1462 aaKnown RBP30.19■■■□□ 2.42
PRAF2-202ENST00000553851 DISP3Q9P2K9 1392 aa30.17■■■□□ 2.42
PRAF2-202ENST00000553851 FOXD1Q16676 465 aa30.17■■■□□ 2.42
PRAF2-202ENST00000553851 CHD2O14647 1828 aaKnown RBP30.16■■■□□ 2.42
PRAF2-202ENST00000553851 DIP2AQ14689 1571 aa30.14■■■□□ 2.42
PRAF2-202ENST00000553851 MPHOSPH9Q99550 1183 aa30.14■■■□□ 2.42
PRAF2-202ENST00000553851 PIK3R4Q99570 1358 aa30.12■■■□□ 2.41
PRAF2-202ENST00000553851 KIF1BO60333 1816 aa30.11■■■□□ 2.41
PRAF2-202ENST00000553851 SETD5Q9C0A6 1442 aa30.11■■■□□ 2.41
PRAF2-202ENST00000553851 AMOTL2Q9Y2J4 779 aa30.09■■■□□ 2.41
PRAF2-202ENST00000553851 NEXMIFQ5QGS0 1516 aa30.08■■■□□ 2.41
PRAF2-202ENST00000553851 MSH6P52701 1360 aa30.08■■■□□ 2.41
PRAF2-202ENST00000553851 ACIN1Q9UKV3 1341 aaKnown RBP30.07■■■□□ 2.4
PRAF2-202ENST00000553851 SETBP1Q9Y6X0 1596 aa30.06■■■□□ 2.4
PRAF2-202ENST00000553851 NRXN3Q9Y4C0 1643 aa30.05■■■□□ 2.4
PRAF2-202ENST00000553851 PTPRUQ92729 1446 aa30.05■■■□□ 2.4
PRAF2-202ENST00000553851 VGFO15240 615 aaPredicted RBP30.03■■■□□ 2.4
PRAF2-202ENST00000553851 C14orf37Q86TY3 774 aa30.03■■■□□ 2.4
PRAF2-202ENST00000553851 FAM135BQ49AJ0 1406 aa30.03■■■□□ 2.4
PRAF2-202ENST00000553851 RPGRIP1LQ68CZ1 1315 aa30.03■■■□□ 2.4
PRAF2-202ENST00000553851 NCOA3Q9Y6Q9 1424 aa30.02■■■□□ 2.4
PRAF2-202ENST00000553851 METP08581 1390 aa30.01■■■□□ 2.39
PRAF2-202ENST00000553851 CCDC144AA2RUR9 1427 aa30■■■□□ 2.39
PRAF2-202ENST00000553851 SLAIN2Q9P270 581 aa29.99■■■□□ 2.39
PRAF2-202ENST00000553851 RAB3GAP2Q9H2M9 1393 aa29.99■■■□□ 2.39
PRAF2-202ENST00000553851 C19orf44Q9H6X5 657 aa29.96■■■□□ 2.39
PRAF2-202ENST00000553851 RGL3Q3MIN7 710 aa29.95■■■□□ 2.38
PRAF2-202ENST00000553851 ILDR2Q71H61 639 aa29.94■■■□□ 2.38
PRAF2-202ENST00000553851 ATF3P18847 181 aa29.92■■■□□ 2.38
PRAF2-202ENST00000553851 XRN1Q8IZH2 1706 aaKnown RBP29.91■■■□□ 2.38
PRAF2-202ENST00000553851 CADPS2Q86UW7 1296 aa29.91■■■□□ 2.38
PRAF2-202ENST00000553851 ROBO1Q9Y6N7 1651 aa29.91■■■□□ 2.38
PRAF2-202ENST00000553851 SPATA31E1Q6ZUB1 1445 aa29.89■■■□□ 2.38
PRAF2-202ENST00000553851 PPLO60437 1756 aa29.88■■■□□ 2.37
PRAF2-202ENST00000553851 MED1Q15648 1581 aaPredicted RBP29.87■■■□□ 2.37
PRAF2-202ENST00000553851 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.87■■■□□ 2.37
PRAF2-202ENST00000553851 ADGRF5Q8IZF2 1346 aa29.85■■■□□ 2.37
PRAF2-202ENST00000553851 HRCP23327 699 aa29.82■■■□□ 2.36
PRAF2-202ENST00000553851 ANKRD30BQ9BXX2 1392 aa29.82■■■□□ 2.36
PRAF2-202ENST00000553851 SETD1AO15047 1707 aaKnown RBP29.8■■■□□ 2.36
PRAF2-202ENST00000553851 DCCP43146 1447 aa29.78■■■□□ 2.36
PRAF2-202ENST00000553851 PHF23Q9BUL5 403 aaPredicted RBP29.77■■■□□ 2.36
PRAF2-202ENST00000553851 ROBO2Q9HCK4 1378 aa29.76■■■□□ 2.35
PRAF2-202ENST00000553851 PTCH1Q13635 1447 aa29.75■■■□□ 2.35
PRAF2-202ENST00000553851 ADGRL3Q9HAR2 1447 aa29.75■■■□□ 2.35
PRAF2-202ENST00000553851 PHLPP1O60346 1717 aa29.73■■■□□ 2.35
PRAF2-202ENST00000553851 IFT172Q9UG01 1749 aa29.73■■■□□ 2.35
PRAF2-202ENST00000553851 BRINP3Q76B58 766 aa29.72■■■□□ 2.35
PRAF2-202ENST00000553851 PRAG1Q86YV5 1406 aa29.7■■■□□ 2.35
PRAF2-202ENST00000553851 MST1RQ04912 1400 aa29.7■■■□□ 2.34
PRAF2-202ENST00000553851 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
PRAF2-202ENST00000553851 TMEM132EQ6IEE7 984 aa29.69■■■□□ 2.34
PRAF2-202ENST00000553851 STK26Q9P289 416 aa29.69■■■□□ 2.34
PRAF2-202ENST00000553851 JCADQ9P266 1359 aa29.67■■■□□ 2.34
PRAF2-202ENST00000553851 NALCNQ8IZF0 1738 aa29.67■■■□□ 2.34
PRAF2-202ENST00000553851 SOCS7O14512 581 aa29.66■■■□□ 2.34
PRAF2-202ENST00000553851 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
PRAF2-202ENST00000553851 C14orf93Q9H972 538 aaKnown RBP29.64■■■□□ 2.34
PRAF2-202ENST00000553851 AHDC1Q5TGY3 1603 aaPredicted RBP29.63■■■□□ 2.33
PRAF2-202ENST00000553851 LRPPRCP42704 1394 aaKnown RBP29.63■■■□□ 2.33
PRAF2-202ENST00000553851 ASXL1Q8IXJ9 1541 aa29.61■■■□□ 2.33
PRAF2-202ENST00000553851 CFAP70Q5T0N1 1121 aa29.61■■■□□ 2.33
PRAF2-202ENST00000553851 WAPLQ7Z5K2 1190 aa29.61■■■□□ 2.33
PRAF2-202ENST00000553851 ABCC11Q96J66 1382 aa29.61■■■□□ 2.33
PRAF2-202ENST00000553851 MYOM2P54296 1465 aa29.6■■■□□ 2.33
PRAF2-202ENST00000553851 NRXN1Q9ULB1 1477 aa29.6■■■□□ 2.33
PRAF2-202ENST00000553851 C1orf167Q5SNV9 1468 aa29.59■■■□□ 2.33
PRAF2-202ENST00000553851 TECPR2O15040 1411 aa29.58■■■□□ 2.33
PRAF2-202ENST00000553851 RGS17Q9UGC6 210 aaPredicted RBP29.58■■■□□ 2.33
PRAF2-202ENST00000553851 YTHDC2Q9H6S0 1430 aaKnown RBP29.57■■■□□ 2.32
PRAF2-202ENST00000553851 DDX17Q92841 729 aaKnown RBP29.56■■■□□ 2.32
PRAF2-202ENST00000553851 KDM2AQ9Y2K7 1162 aa29.56■■■□□ 2.32
PRAF2-202ENST00000553851 DCAF11Q8TEB1 546 aa29.55■■■□□ 2.32
PRAF2-202ENST00000553851 ORAI2Q96SN7 254 aa29.54■■■□□ 2.32
PRAF2-202ENST00000553851 DHX57Q6P158 1386 aaKnown RBP29.53■■■□□ 2.32
PRAF2-202ENST00000553851 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms