RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.24■□□□□ 0.03
HNRNPC-208ENST00000553753 BCANQ96GW7 911 aa15.24■□□□□ 0.03
HNRNPC-208ENST00000553753 SLC26A8Q96RN1 970 aa15.24■□□□□ 0.03
HNRNPC-208ENST00000553753 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-208ENST00000553753 SETD5Q9C0A6 1442 aa15.23■□□□□ 0.03
HNRNPC-208ENST00000553753 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.03
HNRNPC-208ENST00000553753 TRPM2O94759 1503 aa15.21■□□□□ 0.03
HNRNPC-208ENST00000553753 UBAP1LF5GYI3 381 aa15.21■□□□□ 0.02
HNRNPC-208ENST00000553753 NUTM2DQ5VT03 806 aaPredicted RBP15.21■□□□□ 0.02
HNRNPC-208ENST00000553753 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.02
HNRNPC-208ENST00000553753 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.02
HNRNPC-208ENST00000553753 STRCP1A6NGW2 1772 aa15.2■□□□□ 0.02
HNRNPC-208ENST00000553753 FOXD1Q16676 465 aa15.19■□□□□ 0.02
HNRNPC-208ENST00000553753 ZNF326Q5BKZ1 582 aaKnown RBP15.19■□□□□ 0.02
HNRNPC-208ENST00000553753 CLTCL1P53675 1640 aa15.18■□□□□ 0.02
HNRNPC-208ENST00000553753 LRRC7Q96NW7 1537 aa15.18■□□□□ 0.02
HNRNPC-208ENST00000553753 KCNA6P17658 529 aa15.18■□□□□ 0.02
HNRNPC-208ENST00000553753 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
HNRNPC-208ENST00000553753 TOM1O60784 492 aa15.16■□□□□ 0.02
HNRNPC-208ENST00000553753 TBX22Q9Y458 520 aa15.16■□□□□ 0.02
HNRNPC-208ENST00000553753 KIF1BO60333 1816 aa15.15■□□□□ 0.02
HNRNPC-208ENST00000553753 ADAMTS13Q76LX8 1427 aa15.13■□□□□ 0.01
HNRNPC-208ENST00000553753 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
HNRNPC-208ENST00000553753 HRCP23327 699 aa15.11■□□□□ 0.01
HNRNPC-208ENST00000553753 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
HNRNPC-208ENST00000553753 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-208ENST00000553753 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
HNRNPC-208ENST00000553753 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 NWD1Q149M9 1564 aa15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 CHD2O14647 1828 aaKnown RBP15.1■□□□□ 0.01
HNRNPC-208ENST00000553753 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-208ENST00000553753 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-208ENST00000553753 SETBP1Q9Y6X0 1596 aa15.08■□□□□ 0.01
HNRNPC-208ENST00000553753 XIRP1Q702N8 1843 aaKnown RBP15.08■□□□□ 0
HNRNPC-208ENST00000553753 ALKQ9UM73 1620 aa15.06■□□□□ 0
HNRNPC-208ENST00000553753 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
HNRNPC-208ENST00000553753 RGL3Q3MIN7 710 aa15.06■□□□□ 0
HNRNPC-208ENST00000553753 AMOTL2Q9Y2J4 779 aa15.06■□□□□ 0
HNRNPC-208ENST00000553753 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
HNRNPC-208ENST00000553753 METP08581 1390 aa15.04■□□□□ -0
HNRNPC-208ENST00000553753 PTPRUQ92729 1446 aa15.04■□□□□ -0
HNRNPC-208ENST00000553753 MSH6P52701 1360 aa15.03■□□□□ -0
HNRNPC-208ENST00000553753 PPLO60437 1756 aa15.03■□□□□ -0
HNRNPC-208ENST00000553753 HSPA1LP34931 641 aa15.02□□□□□ -0.01
HNRNPC-208ENST00000553753 NCOA3Q9Y6Q9 1424 aa15.02□□□□□ -0.01
HNRNPC-208ENST00000553753 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
HNRNPC-208ENST00000553753 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
HNRNPC-208ENST00000553753 ADGRF5Q8IZF2 1346 aa15□□□□□ -0.01
HNRNPC-208ENST00000553753 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
HNRNPC-208ENST00000553753 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
HNRNPC-208ENST00000553753 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
HNRNPC-208ENST00000553753 FAM135BQ49AJ0 1406 aa14.97□□□□□ -0.01
HNRNPC-208ENST00000553753 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
HNRNPC-208ENST00000553753 IFT172Q9UG01 1749 aa14.96□□□□□ -0.01
HNRNPC-208ENST00000553753 SETD1AO15047 1707 aaKnown RBP14.96□□□□□ -0.02
HNRNPC-208ENST00000553753 ATF3P18847 181 aa14.96□□□□□ -0.02
HNRNPC-208ENST00000553753 PIK3C2GO75747 1445 aa14.94□□□□□ -0.02
HNRNPC-208ENST00000553753 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.93□□□□□ -0.02
HNRNPC-208ENST00000553753 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
HNRNPC-208ENST00000553753 ROBO1Q9Y6N7 1651 aa14.92□□□□□ -0.02
HNRNPC-208ENST00000553753 ROBO2Q9HCK4 1378 aa14.91□□□□□ -0.02
HNRNPC-208ENST00000553753 DCCP43146 1447 aa14.91□□□□□ -0.02
HNRNPC-208ENST00000553753 PRAG1Q86YV5 1406 aa14.91□□□□□ -0.02
HNRNPC-208ENST00000553753 MYOM2P54296 1465 aa14.91□□□□□ -0.02
HNRNPC-208ENST00000553753 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
HNRNPC-208ENST00000553753 C14orf93Q9H972 538 aaKnown RBP14.9□□□□□ -0.02
HNRNPC-208ENST00000553753 NRXN1Q9ULB1 1477 aa14.9□□□□□ -0.02
HNRNPC-208ENST00000553753 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
HNRNPC-208ENST00000553753 DISP3Q9P2K9 1392 aa14.89□□□□□ -0.03
HNRNPC-208ENST00000553753 ADGRL3Q9HAR2 1447 aa14.89□□□□□ -0.03
HNRNPC-208ENST00000553753 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
HNRNPC-208ENST00000553753 STAC3Q96MF2 364 aa14.89□□□□□ -0.03
HNRNPC-208ENST00000553753 STK26Q9P289 416 aa14.89□□□□□ -0.03
HNRNPC-208ENST00000553753 CFAP70Q5T0N1 1121 aa14.88□□□□□ -0.03
HNRNPC-208ENST00000553753 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
HNRNPC-208ENST00000553753 LRPPRCP42704 1394 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-208ENST00000553753 ABCC11Q96J66 1382 aa14.87□□□□□ -0.03
HNRNPC-208ENST00000553753 TECPR2O15040 1411 aa14.86□□□□□ -0.03
HNRNPC-208ENST00000553753 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
HNRNPC-208ENST00000553753 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
HNRNPC-208ENST00000553753 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-208ENST00000553753 YTHDC2Q9H6S0 1430 aaKnown RBP14.85□□□□□ -0.03
HNRNPC-208ENST00000553753 BRINP3Q76B58 766 aa14.85□□□□□ -0.03
HNRNPC-208ENST00000553753 WAPLQ7Z5K2 1190 aa14.85□□□□□ -0.03
HNRNPC-208ENST00000553753 MST1RQ04912 1400 aa14.85□□□□□ -0.03
HNRNPC-208ENST00000553753 LAMC1P11047 1609 aa14.84□□□□□ -0.03
HNRNPC-208ENST00000553753 SIRT1Q96EB6 747 aa14.83□□□□□ -0.04
HNRNPC-208ENST00000553753 PHLPP1O60346 1717 aa14.82□□□□□ -0.04
HNRNPC-208ENST00000553753 KNDC1Q76NI1 1749 aa14.81□□□□□ -0.04
HNRNPC-208ENST00000553753 MED1Q15648 1581 aaPredicted RBP14.8□□□□□ -0.04
HNRNPC-208ENST00000553753 PLEKHH1Q9ULM0 1364 aa14.8□□□□□ -0.04
HNRNPC-208ENST00000553753 C1orf167Q5SNV9 1468 aa14.8□□□□□ -0.04
HNRNPC-208ENST00000553753 AHDC1Q5TGY3 1603 aaPredicted RBP14.79□□□□□ -0.04
HNRNPC-208ENST00000553753 SIN3AQ96ST3 1273 aa14.78□□□□□ -0.04
HNRNPC-208ENST00000553753 ADGRB1O14514 1584 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms