RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 NAIPQ13075 1403 aa27.87■■■□□ 2.05
CLMN-202ENST00000553733 TOM1O60784 492 aa27.87■■■□□ 2.05
CLMN-202ENST00000553733 PIP4K2BP78356 416 aa27.87■■■□□ 2.05
CLMN-202ENST00000553733 SCAF1Q9H7N4 1312 aaKnown RBP27.85■■■□□ 2.05
CLMN-202ENST00000553733 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
CLMN-202ENST00000553733 NKTRP30414 1462 aaKnown RBP27.84■■■□□ 2.05
CLMN-202ENST00000553733 PLEKHG1Q9ULL1 1385 aa27.84■■■□□ 2.05
CLMN-202ENST00000553733 NRXN3Q9Y4C0 1643 aa27.82■■■□□ 2.04
CLMN-202ENST00000553733 HSPA1LP34931 641 aa27.82■■■□□ 2.04
CLMN-202ENST00000553733 SLC26A8Q96RN1 970 aa27.82■■■□□ 2.04
CLMN-202ENST00000553733 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
CLMN-202ENST00000553733 DIP2AQ14689 1571 aa27.81■■■□□ 2.04
CLMN-202ENST00000553733 TRPM2O94759 1503 aa27.8■■■□□ 2.04
CLMN-202ENST00000553733 KIF1BO60333 1816 aa27.78■■■□□ 2.04
CLMN-202ENST00000553733 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
CLMN-202ENST00000553733 ADAMTS13Q76LX8 1427 aa27.77■■■□□ 2.04
CLMN-202ENST00000553733 TMEM94Q12767 1356 aa27.77■■■□□ 2.04
CLMN-202ENST00000553733 ILDR2Q71H61 639 aa27.76■■■□□ 2.03
CLMN-202ENST00000553733 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
CLMN-202ENST00000553733 KCNA6P17658 529 aa27.75■■■□□ 2.03
CLMN-202ENST00000553733 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
CLMN-202ENST00000553733 CHGAP10645 457 aaKnown RBP27.72■■■□□ 2.03
CLMN-202ENST00000553733 NEXMIFQ5QGS0 1516 aa27.71■■■□□ 2.03
CLMN-202ENST00000553733 XRN1Q8IZH2 1706 aaKnown RBP27.7■■■□□ 2.03
CLMN-202ENST00000553733 SETBP1Q9Y6X0 1596 aa27.7■■■□□ 2.03
CLMN-202ENST00000553733 PPP1R15AO75807 674 aaPredicted RBP27.7■■■□□ 2.02
CLMN-202ENST00000553733 NUTM2DQ5VT03 806 aaPredicted RBP27.69■■■□□ 2.02
CLMN-202ENST00000553733 RBM33Q96EV2 1170 aaKnown RBP27.68■■■□□ 2.02
CLMN-202ENST00000553733 SETD1AO15047 1707 aaKnown RBP27.66■■■□□ 2.02
CLMN-202ENST00000553733 BCANQ96GW7 911 aa27.65■■■□□ 2.02
CLMN-202ENST00000553733 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.64■■■□□ 2.02
CLMN-202ENST00000553733 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.64■■■□□ 2.01
CLMN-202ENST00000553733 PROSER2Q86WR7 435 aaPredicted RBP27.62■■■□□ 2.01
CLMN-202ENST00000553733 PPLO60437 1756 aa27.62■■■□□ 2.01
CLMN-202ENST00000553733 PTPRUQ92729 1446 aa27.61■■■□□ 2.01
CLMN-202ENST00000553733 TBX22Q9Y458 520 aa27.61■■■□□ 2.01
CLMN-202ENST00000553733 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
CLMN-202ENST00000553733 HDGFP51858 240 aaKnown RBP27.6■■■□□ 2.01
CLMN-202ENST00000553733 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
CLMN-202ENST00000553733 PHLPP1O60346 1717 aa27.57■■■□□ 2
CLMN-202ENST00000553733 MSH6P52701 1360 aa27.57■■■□□ 2
CLMN-202ENST00000553733 IFT172Q9UG01 1749 aa27.53■■■□□ 2
CLMN-202ENST00000553733 NALCNQ8IZF0 1738 aa27.53■■■□□ 2
CLMN-202ENST00000553733 NCOA3Q9Y6Q9 1424 aa27.52■■■□□ 2
CLMN-202ENST00000553733 COL16A1Q07092 1604 aaPredicted RBP27.51■■□□□ 1.99
CLMN-202ENST00000553733 TRIM52Q96A61 297 aa27.5■■□□□ 1.99
CLMN-202ENST00000553733 METP08581 1390 aa27.48■■□□□ 1.99
CLMN-202ENST00000553733 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
CLMN-202ENST00000553733 SLC4A1APQ9BWU0 796 aaKnown RBP27.45■■□□□ 1.98
CLMN-202ENST00000553733 SOCS7O14512 581 aa27.44■■□□□ 1.98
CLMN-202ENST00000553733 AHDC1Q5TGY3 1603 aaPredicted RBP27.43■■□□□ 1.98
CLMN-202ENST00000553733 AMOTL2Q9Y2J4 779 aa27.43■■□□□ 1.98
CLMN-202ENST00000553733 FOXD1Q16676 465 aa27.41■■□□□ 1.98
CLMN-202ENST00000553733 SLAIN2Q9P270 581 aa27.4■■□□□ 1.98
CLMN-202ENST00000553733 DCCP43146 1447 aa27.4■■□□□ 1.98
CLMN-202ENST00000553733 NHSL1Q5SYE7 1610 aa27.38■■□□□ 1.97
CLMN-202ENST00000553733 SHPRHQ149N8 1683 aa27.37■■□□□ 1.97
CLMN-202ENST00000553733 SPATA31E1Q6ZUB1 1445 aa27.36■■□□□ 1.97
CLMN-202ENST00000553733 PRAG1Q86YV5 1406 aa27.35■■□□□ 1.97
CLMN-202ENST00000553733 C14orf37Q86TY3 774 aa27.35■■□□□ 1.97
CLMN-202ENST00000553733 PTCH1Q13635 1447 aa27.34■■□□□ 1.97
CLMN-202ENST00000553733 ADGRL3Q9HAR2 1447 aa27.34■■□□□ 1.97
CLMN-202ENST00000553733 C19orf44Q9H6X5 657 aa27.34■■□□□ 1.97
CLMN-202ENST00000553733 ASXL1Q8IXJ9 1541 aa27.34■■□□□ 1.97
CLMN-202ENST00000553733 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.97
CLMN-202ENST00000553733 MST1RQ04912 1400 aa27.33■■□□□ 1.97
CLMN-202ENST00000553733 CADPS2Q86UW7 1296 aa27.31■■□□□ 1.96
CLMN-202ENST00000553733 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
CLMN-202ENST00000553733 SETD5Q9C0A6 1442 aa27.31■■□□□ 1.96
CLMN-202ENST00000553733 KNDC1Q76NI1 1749 aa27.3■■□□□ 1.96
CLMN-202ENST00000553733 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
CLMN-202ENST00000553733 RPGRIP1LQ68CZ1 1315 aa27.28■■□□□ 1.96
CLMN-202ENST00000553733 RGS17Q9UGC6 210 aaPredicted RBP27.28■■□□□ 1.96
CLMN-202ENST00000553733 LRP6O75581 1613 aa27.27■■□□□ 1.96
CLMN-202ENST00000553733 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
CLMN-202ENST00000553733 ATF3P18847 181 aa27.26■■□□□ 1.95
CLMN-202ENST00000553733 JCADQ9P266 1359 aa27.25■■□□□ 1.95
CLMN-202ENST00000553733 VGFO15240 615 aaPredicted RBP27.25■■□□□ 1.95
CLMN-202ENST00000553733 LAMC1P11047 1609 aa27.25■■□□□ 1.95
CLMN-202ENST00000553733 RAB3GAP2Q9H2M9 1393 aa27.24■■□□□ 1.95
CLMN-202ENST00000553733 BRINP3Q76B58 766 aa27.23■■□□□ 1.95
CLMN-202ENST00000553733 ADGRF5Q8IZF2 1346 aa27.21■■□□□ 1.95
CLMN-202ENST00000553733 PIK3C2GO75747 1445 aa27.21■■□□□ 1.95
CLMN-202ENST00000553733 CDC42BPGQ6DT37 1551 aa27.2■■□□□ 1.94
CLMN-202ENST00000553733 TECPR2O15040 1411 aa27.16■■□□□ 1.94
CLMN-202ENST00000553733 ANKRD30BQ9BXX2 1392 aa27.16■■□□□ 1.94
CLMN-202ENST00000553733 C1orf167Q5SNV9 1468 aa27.16■■□□□ 1.94
CLMN-202ENST00000553733 NRXN1Q9ULB1 1477 aa27.16■■□□□ 1.94
CLMN-202ENST00000553733 MYOM2P54296 1465 aa27.15■■□□□ 1.94
CLMN-202ENST00000553733 RGL3Q3MIN7 710 aa27.14■■□□□ 1.94
CLMN-202ENST00000553733 FMN2Q9NZ56 1722 aa27.1■■□□□ 1.93
CLMN-202ENST00000553733 POTEAQ6S8J7 498 aa27.09■■□□□ 1.93
CLMN-202ENST00000553733 SPATA31A6Q5VVP1 1343 aa27.09■■□□□ 1.93
CLMN-202ENST00000553733 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
CLMN-202ENST00000553733 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
CLMN-202ENST00000553733 LRPPRCP42704 1394 aaKnown RBP27.07■■□□□ 1.92
CLMN-202ENST00000553733 RGPD8O14715 1765 aaPredicted RBP27.06■■□□□ 1.92
CLMN-202ENST00000553733 PLEKHH1Q9ULM0 1364 aa27.04■■□□□ 1.92
CLMN-202ENST00000553733 YTHDC2Q9H6S0 1430 aaKnown RBP27.04■■□□□ 1.92
CLMN-202ENST00000553733 COL22A1Q8NFW1 1626 aaPredicted RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms