RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.38■■□□□ 1.97
CPSF2-202ENST00000553427 CERKQ8TCT0 537 aa27.38■■□□□ 1.97
CPSF2-202ENST00000553427 IQSEC2Q5JU85 1478 aa27.37■■□□□ 1.97
CPSF2-202ENST00000553427 PLEKHG1Q9ULL1 1385 aa27.36■■□□□ 1.97
CPSF2-202ENST00000553427 CPS1P31327 1500 aa27.35■■□□□ 1.97
CPSF2-202ENST00000553427 FOXD1Q16676 465 aa27.34■■□□□ 1.97
CPSF2-202ENST00000553427 KIF1BO60333 1816 aa27.34■■□□□ 1.97
CPSF2-202ENST00000553427 CCDC144AA2RUR9 1427 aa27.33■■□□□ 1.96
CPSF2-202ENST00000553427 PPP1R15AO75807 674 aaPredicted RBP27.3■■□□□ 1.96
CPSF2-202ENST00000553427 NEXMIFQ5QGS0 1516 aa27.29■■□□□ 1.96
CPSF2-202ENST00000553427 DIP2AQ14689 1571 aa27.26■■□□□ 1.96
CPSF2-202ENST00000553427 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
CPSF2-202ENST00000553427 FBXO41Q8TF61 875 aa27.25■■□□□ 1.95
CPSF2-202ENST00000553427 SPATA31E1Q6ZUB1 1445 aa27.24■■□□□ 1.95
CPSF2-202ENST00000553427 RPGRIP1LQ68CZ1 1315 aa27.24■■□□□ 1.95
CPSF2-202ENST00000553427 SETBP1Q9Y6X0 1596 aa27.23■■□□□ 1.95
CPSF2-202ENST00000553427 ADAMTS13Q76LX8 1427 aa27.23■■□□□ 1.95
CPSF2-202ENST00000553427 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
CPSF2-202ENST00000553427 STRCP1A6NGW2 1772 aa27.22■■□□□ 1.95
CPSF2-202ENST00000553427 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
CPSF2-202ENST00000553427 SLC26A8Q96RN1 970 aa27.21■■□□□ 1.95
CPSF2-202ENST00000553427 TBX22Q9Y458 520 aa27.21■■□□□ 1.95
CPSF2-202ENST00000553427 NWD1Q149M9 1564 aa27.21■■□□□ 1.95
CPSF2-202ENST00000553427 NUTM2DQ5VT03 806 aaPredicted RBP27.19■■□□□ 1.94
CPSF2-202ENST00000553427 BCANQ96GW7 911 aa27.18■■□□□ 1.94
CPSF2-202ENST00000553427 NRXN3Q9Y4C0 1643 aa27.18■■□□□ 1.94
CPSF2-202ENST00000553427 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
CPSF2-202ENST00000553427 LRRC7Q96NW7 1537 aa27.17■■□□□ 1.94
CPSF2-202ENST00000553427 KCNA6P17658 529 aa27.17■■□□□ 1.94
CPSF2-202ENST00000553427 NKTRP30414 1462 aaKnown RBP27.16■■□□□ 1.94
CPSF2-202ENST00000553427 PPLO60437 1756 aa27.16■■□□□ 1.94
CPSF2-202ENST00000553427 ILDR1Q86SU0 546 aaPredicted RBP27.15■■□□□ 1.94
CPSF2-202ENST00000553427 VGFO15240 615 aaPredicted RBP27.14■■□□□ 1.94
CPSF2-202ENST00000553427 IFT172Q9UG01 1749 aa27.11■■□□□ 1.93
CPSF2-202ENST00000553427 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
CPSF2-202ENST00000553427 SENP3Q9H4L4 574 aaPredicted RBP27.06■■□□□ 1.92
CPSF2-202ENST00000553427 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
CPSF2-202ENST00000553427 MYOM2P54296 1465 aa27.04■■□□□ 1.92
CPSF2-202ENST00000553427 SETD1AO15047 1707 aaKnown RBP27.03■■□□□ 1.92
CPSF2-202ENST00000553427 XRN1Q8IZH2 1706 aaKnown RBP27.03■■□□□ 1.92
CPSF2-202ENST00000553427 ALKQ9UM73 1620 aa27.02■■□□□ 1.92
CPSF2-202ENST00000553427 PTPRUQ92729 1446 aa27.02■■□□□ 1.92
CPSF2-202ENST00000553427 METP08581 1390 aa27.02■■□□□ 1.92
CPSF2-202ENST00000553427 TMEM94Q12767 1356 aa27.02■■□□□ 1.92
CPSF2-202ENST00000553427 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
CPSF2-202ENST00000553427 NRXN1Q9ULB1 1477 aa27.01■■□□□ 1.91
CPSF2-202ENST00000553427 PIK3C2GO75747 1445 aa27■■□□□ 1.91
CPSF2-202ENST00000553427 NCOA3Q9Y6Q9 1424 aa27■■□□□ 1.91
CPSF2-202ENST00000553427 ADGRF5Q8IZF2 1346 aa27■■□□□ 1.91
CPSF2-202ENST00000553427 PRAG1Q86YV5 1406 aa26.99■■□□□ 1.91
CPSF2-202ENST00000553427 UBAP1LF5GYI3 381 aa26.99■■□□□ 1.91
CPSF2-202ENST00000553427 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
CPSF2-202ENST00000553427 TOM1O60784 492 aa26.96■■□□□ 1.91
CPSF2-202ENST00000553427 AMOTL2Q9Y2J4 779 aa26.96■■□□□ 1.91
CPSF2-202ENST00000553427 STAC3Q96MF2 364 aa26.95■■□□□ 1.9
CPSF2-202ENST00000553427 DHX57Q6P158 1386 aaKnown RBP26.95■■□□□ 1.9
CPSF2-202ENST00000553427 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
CPSF2-202ENST00000553427 LAMC1P11047 1609 aa26.9■■□□□ 1.9
CPSF2-202ENST00000553427 MSH6P52701 1360 aa26.89■■□□□ 1.9
CPSF2-202ENST00000553427 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
CPSF2-202ENST00000553427 C14orf93Q9H972 538 aaKnown RBP26.86■■□□□ 1.89
CPSF2-202ENST00000553427 TECPR2O15040 1411 aa26.85■■□□□ 1.89
CPSF2-202ENST00000553427 RBM33Q96EV2 1170 aaKnown RBP26.85■■□□□ 1.89
CPSF2-202ENST00000553427 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
CPSF2-202ENST00000553427 DCCP43146 1447 aa26.83■■□□□ 1.89
CPSF2-202ENST00000553427 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
CPSF2-202ENST00000553427 ROBO2Q9HCK4 1378 aa26.82■■□□□ 1.88
CPSF2-202ENST00000553427 C19orf44Q9H6X5 657 aa26.81■■□□□ 1.88
CPSF2-202ENST00000553427 KNDC1Q76NI1 1749 aa26.81■■□□□ 1.88
CPSF2-202ENST00000553427 ABCC11Q96J66 1382 aa26.81■■□□□ 1.88
CPSF2-202ENST00000553427 ADGRL3Q9HAR2 1447 aa26.8■■□□□ 1.88
CPSF2-202ENST00000553427 PIP4K2BP78356 416 aa26.79■■□□□ 1.88
CPSF2-202ENST00000553427 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.79■■□□□ 1.88
CPSF2-202ENST00000553427 YTHDC2Q9H6S0 1430 aaKnown RBP26.78■■□□□ 1.88
CPSF2-202ENST00000553427 ADGRB1O14514 1584 aa26.77■■□□□ 1.88
CPSF2-202ENST00000553427 FAM135BQ49AJ0 1406 aa26.77■■□□□ 1.88
CPSF2-202ENST00000553427 CFAP70Q5T0N1 1121 aa26.77■■□□□ 1.88
CPSF2-202ENST00000553427 C14orf37Q86TY3 774 aa26.77■■□□□ 1.88
CPSF2-202ENST00000553427 CADPS2Q86UW7 1296 aa26.76■■□□□ 1.87
CPSF2-202ENST00000553427 KDM2AQ9Y2K7 1162 aa26.76■■□□□ 1.87
CPSF2-202ENST00000553427 SCAF1Q9H7N4 1312 aaKnown RBP26.75■■□□□ 1.87
CPSF2-202ENST00000553427 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
CPSF2-202ENST00000553427 TMEM132EQ6IEE7 984 aa26.74■■□□□ 1.87
CPSF2-202ENST00000553427 SIN3AQ96ST3 1273 aa26.73■■□□□ 1.87
CPSF2-202ENST00000553427 ATF3P18847 181 aa26.72■■□□□ 1.87
CPSF2-202ENST00000553427 SIRT1Q96EB6 747 aa26.72■■□□□ 1.87
CPSF2-202ENST00000553427 DLC1Q96QB1 1528 aa26.71■■□□□ 1.87
CPSF2-202ENST00000553427 PCGF6Q9BYE7 350 aa26.71■■□□□ 1.87
CPSF2-202ENST00000553427 SLAIN2Q9P270 581 aa26.71■■□□□ 1.87
CPSF2-202ENST00000553427 KIAA1210Q9ULL0 1709 aa26.7■■□□□ 1.87
CPSF2-202ENST00000553427 STK26Q9P289 416 aa26.69■■□□□ 1.86
CPSF2-202ENST00000553427 L3MBTL2Q969R5 705 aa26.68■■□□□ 1.86
CPSF2-202ENST00000553427 ROBO1Q9Y6N7 1651 aa26.68■■□□□ 1.86
CPSF2-202ENST00000553427 CDC42BPGQ6DT37 1551 aa26.67■■□□□ 1.86
CPSF2-202ENST00000553427 MST1RQ04912 1400 aa26.66■■□□□ 1.86
CPSF2-202ENST00000553427 HSPA1LP34931 641 aa26.66■■□□□ 1.86
CPSF2-202ENST00000553427 NEUROD1Q13562 356 aa26.65■■□□□ 1.86
CPSF2-202ENST00000553427 PLEKHH1Q9ULM0 1364 aa26.62■■□□□ 1.85
CPSF2-202ENST00000553427 WAPLQ7Z5K2 1190 aa26.61■■□□□ 1.85
CPSF2-202ENST00000553427 CLSPNQ9HAW4 1339 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms