RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 SCAF11Q99590 1463 aaKnown RBP22.24■■□□□ 1.15
SMARCD1-211ENST00000551497 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
SMARCD1-211ENST00000551497 NEURL4Q96JN8 1562 aa22.24■■□□□ 1.15
SMARCD1-211ENST00000551497 HDGFP51858 240 aaKnown RBP22.23■■□□□ 1.15
SMARCD1-211ENST00000551497 NPHP4O75161 1426 aaPredicted RBP22.23■■□□□ 1.15
SMARCD1-211ENST00000551497 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
SMARCD1-211ENST00000551497 KIF1BO60333 1816 aa22.22■■□□□ 1.15
SMARCD1-211ENST00000551497 POLR1AO95602 1720 aaPredicted RBP22.22■■□□□ 1.15
SMARCD1-211ENST00000551497 MED14O60244 1454 aa22.21■■□□□ 1.15
SMARCD1-211ENST00000551497 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
SMARCD1-211ENST00000551497 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
SMARCD1-211ENST00000551497 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.14
SMARCD1-211ENST00000551497 BCANQ96GW7 911 aa22.19■■□□□ 1.14
SMARCD1-211ENST00000551497 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
SMARCD1-211ENST00000551497 SLC26A8Q96RN1 970 aa22.17■■□□□ 1.14
SMARCD1-211ENST00000551497 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
SMARCD1-211ENST00000551497 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
SMARCD1-211ENST00000551497 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
SMARCD1-211ENST00000551497 ZNF335Q9H4Z2 1342 aaPredicted RBP22.13■■□□□ 1.13
SMARCD1-211ENST00000551497 PLEKHG1Q9ULL1 1385 aa22.12■■□□□ 1.13
SMARCD1-211ENST00000551497 NEXMIFQ5QGS0 1516 aa22.12■■□□□ 1.13
SMARCD1-211ENST00000551497 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
SMARCD1-211ENST00000551497 ADGRF5Q8IZF2 1346 aa22.08■■□□□ 1.13
SMARCD1-211ENST00000551497 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
SMARCD1-211ENST00000551497 CERKQ8TCT0 537 aa22.08■■□□□ 1.13
SMARCD1-211ENST00000551497 TBX22Q9Y458 520 aa22.07■■□□□ 1.12
SMARCD1-211ENST00000551497 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
SMARCD1-211ENST00000551497 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
SMARCD1-211ENST00000551497 PPLO60437 1756 aa22.05■■□□□ 1.12
SMARCD1-211ENST00000551497 DCAF11Q8TEB1 546 aa22.04■■□□□ 1.12
SMARCD1-211ENST00000551497 LTBP4Q8N2S1 1624 aa22.02■■□□□ 1.12
SMARCD1-211ENST00000551497 KCNA6P17658 529 aa22■■□□□ 1.11
SMARCD1-211ENST00000551497 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
SMARCD1-211ENST00000551497 IFT172Q9UG01 1749 aa21.99■■□□□ 1.11
SMARCD1-211ENST00000551497 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
SMARCD1-211ENST00000551497 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
SMARCD1-211ENST00000551497 METP08581 1390 aa21.98■■□□□ 1.11
SMARCD1-211ENST00000551497 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
SMARCD1-211ENST00000551497 RBM33Q96EV2 1170 aaKnown RBP21.95■■□□□ 1.1
SMARCD1-211ENST00000551497 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
SMARCD1-211ENST00000551497 CFAP70Q5T0N1 1121 aa21.94■■□□□ 1.1
SMARCD1-211ENST00000551497 PTPRUQ92729 1446 aa21.94■■□□□ 1.1
SMARCD1-211ENST00000551497 ALKQ9UM73 1620 aa21.94■■□□□ 1.1
SMARCD1-211ENST00000551497 C14orf93Q9H972 538 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-211ENST00000551497 MYOM2P54296 1465 aa21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 TMEM132EQ6IEE7 984 aa21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 CCER1Q8TC90 406 aaPredicted RBP21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 CHD2O14647 1828 aaKnown RBP21.92■■□□□ 1.1
SMARCD1-211ENST00000551497 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
SMARCD1-211ENST00000551497 NRXN1Q9ULB1 1477 aa21.91■■□□□ 1.1
SMARCD1-211ENST00000551497 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
SMARCD1-211ENST00000551497 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
SMARCD1-211ENST00000551497 CPS1P31327 1500 aa21.9■■□□□ 1.1
SMARCD1-211ENST00000551497 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.09
SMARCD1-211ENST00000551497 SETD1AO15047 1707 aaKnown RBP21.87■■□□□ 1.09
SMARCD1-211ENST00000551497 STK26Q9P289 416 aa21.87■■□□□ 1.09
SMARCD1-211ENST00000551497 NWD1Q149M9 1564 aa21.85■■□□□ 1.09
SMARCD1-211ENST00000551497 TMEM94Q12767 1356 aa21.85■■□□□ 1.09
SMARCD1-211ENST00000551497 TONSLQ96HA7 1378 aa21.83■■□□□ 1.08
SMARCD1-211ENST00000551497 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
SMARCD1-211ENST00000551497 NBPF1Q3BBV0 1214 aa21.81■■□□□ 1.08
SMARCD1-211ENST00000551497 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
SMARCD1-211ENST00000551497 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
SMARCD1-211ENST00000551497 NBPF8Q3BBV2 869 aa21.8■■□□□ 1.08
SMARCD1-211ENST00000551497 XIRP1Q702N8 1843 aaKnown RBP21.8■■□□□ 1.08
SMARCD1-211ENST00000551497 XRN1Q8IZH2 1706 aaKnown RBP21.8■■□□□ 1.08
SMARCD1-211ENST00000551497 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
SMARCD1-211ENST00000551497 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
SMARCD1-211ENST00000551497 ROBO2Q9HCK4 1378 aa21.79■■□□□ 1.08
SMARCD1-211ENST00000551497 UBAP1LF5GYI3 381 aa21.77■■□□□ 1.08
SMARCD1-211ENST00000551497 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
SMARCD1-211ENST00000551497 C14orf37Q86TY3 774 aa21.77■■□□□ 1.08
SMARCD1-211ENST00000551497 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
SMARCD1-211ENST00000551497 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.07
SMARCD1-211ENST00000551497 ABCC11Q96J66 1382 aa21.76■■□□□ 1.07
SMARCD1-211ENST00000551497 TRAK1Q9UPV9 953 aa21.75■■□□□ 1.07
SMARCD1-211ENST00000551497 ADGRB1O14514 1584 aa21.74■■□□□ 1.07
SMARCD1-211ENST00000551497 LAMC1P11047 1609 aa21.74■■□□□ 1.07
SMARCD1-211ENST00000551497 C19orf44Q9H6X5 657 aa21.72■■□□□ 1.07
SMARCD1-211ENST00000551497 DISP3Q9P2K9 1392 aa21.72■■□□□ 1.07
SMARCD1-211ENST00000551497 PLEKHH1Q9ULM0 1364 aa21.72■■□□□ 1.07
SMARCD1-211ENST00000551497 TOM1O60784 492 aa21.71■■□□□ 1.07
SMARCD1-211ENST00000551497 TECPR2O15040 1411 aa21.71■■□□□ 1.07
SMARCD1-211ENST00000551497 NCOA3Q9Y6Q9 1424 aa21.71■■□□□ 1.07
SMARCD1-211ENST00000551497 SIRT1Q96EB6 747 aa21.7■■□□□ 1.06
SMARCD1-211ENST00000551497 MSH6P52701 1360 aa21.7■■□□□ 1.06
SMARCD1-211ENST00000551497 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
SMARCD1-211ENST00000551497 PIP4K2BP78356 416 aa21.69■■□□□ 1.06
SMARCD1-211ENST00000551497 SAFB2Q14151 953 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMARCD1-211ENST00000551497 PRAM1Q96QH2 718 aa21.69■■□□□ 1.06
SMARCD1-211ENST00000551497 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
SMARCD1-211ENST00000551497 KIAA1210Q9ULL0 1709 aa21.68■■□□□ 1.06
SMARCD1-211ENST00000551497 POGKQ9P215 609 aa21.67■■□□□ 1.06
SMARCD1-211ENST00000551497 ATF3P18847 181 aa21.66■■□□□ 1.06
SMARCD1-211ENST00000551497 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-211ENST00000551497 FAM135BQ49AJ0 1406 aa21.64■■□□□ 1.06
SMARCD1-211ENST00000551497 KNDC1Q76NI1 1749 aa21.64■■□□□ 1.06
SMARCD1-211ENST00000551497 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms