RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 NUTM2DQ5VT03 806 aaPredicted RBP13.98□□□□□ -0.17
PFDN5-215ENST00000551223 CCDC144AA2RUR9 1427 aa13.98□□□□□ -0.17
PFDN5-215ENST00000551223 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
PFDN5-215ENST00000551223 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
PFDN5-215ENST00000551223 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
PFDN5-215ENST00000551223 KIF1BO60333 1816 aa13.97□□□□□ -0.17
PFDN5-215ENST00000551223 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
PFDN5-215ENST00000551223 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.18
PFDN5-215ENST00000551223 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
PFDN5-215ENST00000551223 BCANQ96GW7 911 aa13.94□□□□□ -0.18
PFDN5-215ENST00000551223 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
PFDN5-215ENST00000551223 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
PFDN5-215ENST00000551223 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
PFDN5-215ENST00000551223 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
PFDN5-215ENST00000551223 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
PFDN5-215ENST00000551223 CERKQ8TCT0 537 aa13.92□□□□□ -0.18
PFDN5-215ENST00000551223 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
PFDN5-215ENST00000551223 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
PFDN5-215ENST00000551223 VGFO15240 615 aaPredicted RBP13.89□□□□□ -0.19
PFDN5-215ENST00000551223 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
PFDN5-215ENST00000551223 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
PFDN5-215ENST00000551223 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
PFDN5-215ENST00000551223 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
PFDN5-215ENST00000551223 PPLO60437 1756 aa13.86□□□□□ -0.19
PFDN5-215ENST00000551223 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
PFDN5-215ENST00000551223 CPS1P31327 1500 aa13.86□□□□□ -0.19
PFDN5-215ENST00000551223 KCNA6P17658 529 aa13.86□□□□□ -0.19
PFDN5-215ENST00000551223 SETBP1Q9Y6X0 1596 aa13.85□□□□□ -0.19
PFDN5-215ENST00000551223 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
PFDN5-215ENST00000551223 ADGRF5Q8IZF2 1346 aa13.85□□□□□ -0.19
PFDN5-215ENST00000551223 DIP2AQ14689 1571 aa13.83□□□□□ -0.19
PFDN5-215ENST00000551223 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
PFDN5-215ENST00000551223 IFT172Q9UG01 1749 aa13.82□□□□□ -0.2
PFDN5-215ENST00000551223 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
PFDN5-215ENST00000551223 METP08581 1390 aa13.82□□□□□ -0.2
PFDN5-215ENST00000551223 IQSEC2Q5JU85 1478 aa13.81□□□□□ -0.2
PFDN5-215ENST00000551223 CHD2O14647 1828 aaKnown RBP13.81□□□□□ -0.2
PFDN5-215ENST00000551223 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
PFDN5-215ENST00000551223 NWD1Q149M9 1564 aa13.8□□□□□ -0.2
PFDN5-215ENST00000551223 PROSER2Q86WR7 435 aaPredicted RBP13.8□□□□□ -0.2
PFDN5-215ENST00000551223 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
PFDN5-215ENST00000551223 FBXO41Q8TF61 875 aa13.8□□□□□ -0.2
PFDN5-215ENST00000551223 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
PFDN5-215ENST00000551223 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
PFDN5-215ENST00000551223 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
PFDN5-215ENST00000551223 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
PFDN5-215ENST00000551223 MYOM2P54296 1465 aa13.79□□□□□ -0.2
PFDN5-215ENST00000551223 RBM33Q96EV2 1170 aaKnown RBP13.78□□□□□ -0.2
PFDN5-215ENST00000551223 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
PFDN5-215ENST00000551223 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
PFDN5-215ENST00000551223 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
PFDN5-215ENST00000551223 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
PFDN5-215ENST00000551223 SETD1AO15047 1707 aaKnown RBP13.77□□□□□ -0.21
PFDN5-215ENST00000551223 NEUROD1Q13562 356 aa13.77□□□□□ -0.21
PFDN5-215ENST00000551223 ILDR1Q86SU0 546 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-215ENST00000551223 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
PFDN5-215ENST00000551223 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
PFDN5-215ENST00000551223 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
PFDN5-215ENST00000551223 CFAP70Q5T0N1 1121 aa13.75□□□□□ -0.21
PFDN5-215ENST00000551223 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
PFDN5-215ENST00000551223 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
PFDN5-215ENST00000551223 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
PFDN5-215ENST00000551223 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
PFDN5-215ENST00000551223 TOM1O60784 492 aa13.72□□□□□ -0.21
PFDN5-215ENST00000551223 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
PFDN5-215ENST00000551223 STK26Q9P289 416 aa13.71□□□□□ -0.21
PFDN5-215ENST00000551223 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
PFDN5-215ENST00000551223 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
PFDN5-215ENST00000551223 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.22
PFDN5-215ENST00000551223 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
PFDN5-215ENST00000551223 PRAG1Q86YV5 1406 aa13.7□□□□□ -0.22
PFDN5-215ENST00000551223 LAMC1P11047 1609 aa13.69□□□□□ -0.22
PFDN5-215ENST00000551223 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
PFDN5-215ENST00000551223 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
PFDN5-215ENST00000551223 MSH6P52701 1360 aa13.69□□□□□ -0.22
PFDN5-215ENST00000551223 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
PFDN5-215ENST00000551223 PIP4K2BP78356 416 aa13.68□□□□□ -0.22
PFDN5-215ENST00000551223 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
PFDN5-215ENST00000551223 TECPR2O15040 1411 aa13.67□□□□□ -0.22
PFDN5-215ENST00000551223 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
PFDN5-215ENST00000551223 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
PFDN5-215ENST00000551223 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
PFDN5-215ENST00000551223 SIRT1Q96EB6 747 aa13.65□□□□□ -0.22
PFDN5-215ENST00000551223 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
PFDN5-215ENST00000551223 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 ATF3P18847 181 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 NBPF1Q3BBV0 1214 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-215ENST00000551223 SLAIN2Q9P270 581 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 KNDC1Q76NI1 1749 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
PFDN5-215ENST00000551223 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
PFDN5-215ENST00000551223 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
PFDN5-215ENST00000551223 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
PFDN5-215ENST00000551223 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
PFDN5-215ENST00000551223 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
PFDN5-215ENST00000551223 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
PFDN5-215ENST00000551223 DCCP43146 1447 aa13.62□□□□□ -0.23
PFDN5-215ENST00000551223 PRAM1Q96QH2 718 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms