RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TOM1O60784 492 aa22.95■■□□□ 1.26
PRPF40B-211ENST00000551063 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.26
PRPF40B-211ENST00000551063 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
PRPF40B-211ENST00000551063 HDGFP51858 240 aaKnown RBP22.94■■□□□ 1.26
PRPF40B-211ENST00000551063 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
PRPF40B-211ENST00000551063 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
PRPF40B-211ENST00000551063 CLTCL1P53675 1640 aa22.91■■□□□ 1.26
PRPF40B-211ENST00000551063 HRCP23327 699 aa22.91■■□□□ 1.26
PRPF40B-211ENST00000551063 PLEKHG1Q9ULL1 1385 aa22.9■■□□□ 1.26
PRPF40B-211ENST00000551063 SCAF1Q9H7N4 1312 aaKnown RBP22.89■■□□□ 1.26
PRPF40B-211ENST00000551063 PPP1R15AO75807 674 aaPredicted RBP22.88■■□□□ 1.25
PRPF40B-211ENST00000551063 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
PRPF40B-211ENST00000551063 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
PRPF40B-211ENST00000551063 FOXD1Q16676 465 aa22.85■■□□□ 1.25
PRPF40B-211ENST00000551063 ILDR2Q71H61 639 aa22.84■■□□□ 1.25
PRPF40B-211ENST00000551063 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
PRPF40B-211ENST00000551063 ZNF326Q5BKZ1 582 aaKnown RBP22.82■■□□□ 1.24
PRPF40B-211ENST00000551063 HSPA1LP34931 641 aa22.8■■□□□ 1.24
PRPF40B-211ENST00000551063 BCANQ96GW7 911 aa22.8■■□□□ 1.24
PRPF40B-211ENST00000551063 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
PRPF40B-211ENST00000551063 NEXMIFQ5QGS0 1516 aa22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 LRRC7Q96NW7 1537 aa22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 DIP2AQ14689 1571 aa22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 ADAMTS13Q76LX8 1427 aa22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 KIF1BO60333 1816 aa22.78■■□□□ 1.24
PRPF40B-211ENST00000551063 KCNA6P17658 529 aa22.77■■□□□ 1.24
PRPF40B-211ENST00000551063 TBX22Q9Y458 520 aa22.77■■□□□ 1.24
PRPF40B-211ENST00000551063 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
PRPF40B-211ENST00000551063 SOCS7O14512 581 aa22.76■■□□□ 1.23
PRPF40B-211ENST00000551063 NWD1Q149M9 1564 aa22.75■■□□□ 1.23
PRPF40B-211ENST00000551063 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
PRPF40B-211ENST00000551063 STRCP1A6NGW2 1772 aa22.74■■□□□ 1.23
PRPF40B-211ENST00000551063 SETBP1Q9Y6X0 1596 aa22.74■■□□□ 1.23
PRPF40B-211ENST00000551063 PIK3R4Q99570 1358 aa22.74■■□□□ 1.23
PRPF40B-211ENST00000551063 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
PRPF40B-211ENST00000551063 VGFO15240 615 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-211ENST00000551063 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-211ENST00000551063 ANKRD30BQ9BXX2 1392 aa22.7■■□□□ 1.22
PRPF40B-211ENST00000551063 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
PRPF40B-211ENST00000551063 NRXN3Q9Y4C0 1643 aa22.69■■□□□ 1.22
PRPF40B-211ENST00000551063 TMEM94Q12767 1356 aa22.66■■□□□ 1.22
PRPF40B-211ENST00000551063 TRIM26Q12899 539 aaPredicted RBP22.63■■□□□ 1.21
PRPF40B-211ENST00000551063 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
PRPF40B-211ENST00000551063 PPLO60437 1756 aa22.63■■□□□ 1.21
PRPF40B-211ENST00000551063 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-211ENST00000551063 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
PRPF40B-211ENST00000551063 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
PRPF40B-211ENST00000551063 NCOA3Q9Y6Q9 1424 aa22.6■■□□□ 1.21
PRPF40B-211ENST00000551063 METP08581 1390 aa22.6■■□□□ 1.21
PRPF40B-211ENST00000551063 MED1Q15648 1581 aaPredicted RBP22.59■■□□□ 1.21
PRPF40B-211ENST00000551063 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
PRPF40B-211ENST00000551063 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
PRPF40B-211ENST00000551063 MYOM2P54296 1465 aa22.57■■□□□ 1.2
PRPF40B-211ENST00000551063 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
PRPF40B-211ENST00000551063 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
PRPF40B-211ENST00000551063 PIK3C2GO75747 1445 aa22.56■■□□□ 1.2
PRPF40B-211ENST00000551063 XIRP1Q702N8 1843 aaKnown RBP22.55■■□□□ 1.2
PRPF40B-211ENST00000551063 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
PRPF40B-211ENST00000551063 PRAG1Q86YV5 1406 aa22.55■■□□□ 1.2
PRPF40B-211ENST00000551063 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
PRPF40B-211ENST00000551063 MSH6P52701 1360 aa22.54■■□□□ 1.2
PRPF40B-211ENST00000551063 FAM135BQ49AJ0 1406 aa22.54■■□□□ 1.2
PRPF40B-211ENST00000551063 RBM33Q96EV2 1170 aaKnown RBP22.53■■□□□ 1.2
PRPF40B-211ENST00000551063 SETD1AO15047 1707 aaKnown RBP22.53■■□□□ 1.2
PRPF40B-211ENST00000551063 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
PRPF40B-211ENST00000551063 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
PRPF40B-211ENST00000551063 C14orf37Q86TY3 774 aa22.47■■□□□ 1.19
PRPF40B-211ENST00000551063 C19orf44Q9H6X5 657 aa22.46■■□□□ 1.19
PRPF40B-211ENST00000551063 DHX57Q6P158 1386 aaKnown RBP22.46■■□□□ 1.19
PRPF40B-211ENST00000551063 DCCP43146 1447 aa22.46■■□□□ 1.19
PRPF40B-211ENST00000551063 C14orf93Q9H972 538 aaKnown RBP22.45■■□□□ 1.18
PRPF40B-211ENST00000551063 ASXL1Q8IXJ9 1541 aa22.45■■□□□ 1.18
PRPF40B-211ENST00000551063 TECPR2O15040 1411 aa22.44■■□□□ 1.18
PRPF40B-211ENST00000551063 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
PRPF40B-211ENST00000551063 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
PRPF40B-211ENST00000551063 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
PRPF40B-211ENST00000551063 LAMC1P11047 1609 aa22.43■■□□□ 1.18
PRPF40B-211ENST00000551063 ADGRL3Q9HAR2 1447 aa22.43■■□□□ 1.18
PRPF40B-211ENST00000551063 CADPS2Q86UW7 1296 aa22.42■■□□□ 1.18
PRPF40B-211ENST00000551063 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
PRPF40B-211ENST00000551063 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
PRPF40B-211ENST00000551063 ATF3P18847 181 aa22.4■■□□□ 1.18
PRPF40B-211ENST00000551063 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.18
PRPF40B-211ENST00000551063 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
PRPF40B-211ENST00000551063 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
PRPF40B-211ENST00000551063 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.37■■□□□ 1.17
PRPF40B-211ENST00000551063 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
PRPF40B-211ENST00000551063 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
PRPF40B-211ENST00000551063 KNDC1Q76NI1 1749 aa22.35■■□□□ 1.17
PRPF40B-211ENST00000551063 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
PRPF40B-211ENST00000551063 STK26Q9P289 416 aa22.34■■□□□ 1.17
PRPF40B-211ENST00000551063 SIRT1Q96EB6 747 aa22.33■■□□□ 1.17
PRPF40B-211ENST00000551063 MST1RQ04912 1400 aa22.32■■□□□ 1.16
PRPF40B-211ENST00000551063 NALCNQ8IZF0 1738 aa22.32■■□□□ 1.16
PRPF40B-211ENST00000551063 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
PRPF40B-211ENST00000551063 RGS17Q9UGC6 210 aaPredicted RBP22.31■■□□□ 1.16
PRPF40B-211ENST00000551063 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
PRPF40B-211ENST00000551063 JCADQ9P266 1359 aa22.28■■□□□ 1.16
PRPF40B-211ENST00000551063 CDC42BPGQ6DT37 1551 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms