RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 FOXD1Q16676 465 aa17.67■□□□□ 0.42
TUBA1A-207ENST00000550767 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
TUBA1A-207ENST00000550767 CHGAP10645 457 aaKnown RBP17.66■□□□□ 0.42
TUBA1A-207ENST00000550767 LTKP29376 864 aa17.66■□□□□ 0.42
TUBA1A-207ENST00000550767 TMEM2Q9UHN6 1383 aa17.65■□□□□ 0.42
TUBA1A-207ENST00000550767 TXNDC2Q86VQ3 553 aa17.65■□□□□ 0.42
TUBA1A-207ENST00000550767 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
TUBA1A-207ENST00000550767 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.41
TUBA1A-207ENST00000550767 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
TUBA1A-207ENST00000550767 STRCP1A6NGW2 1772 aa17.61■□□□□ 0.41
TUBA1A-207ENST00000550767 TOM1O60784 492 aa17.6■□□□□ 0.41
TUBA1A-207ENST00000550767 ZFYVE9O95405 1425 aa17.6■□□□□ 0.41
TUBA1A-207ENST00000550767 RIMS2Q9UQ26 1411 aa17.6■□□□□ 0.41
TUBA1A-207ENST00000550767 LRRC7Q96NW7 1537 aa17.57■□□□□ 0.4
TUBA1A-207ENST00000550767 HDGFP51858 240 aaKnown RBP17.56■□□□□ 0.4
TUBA1A-207ENST00000550767 ZNF326Q5BKZ1 582 aaKnown RBP17.56■□□□□ 0.4
TUBA1A-207ENST00000550767 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
TUBA1A-207ENST00000550767 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
TUBA1A-207ENST00000550767 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
TUBA1A-207ENST00000550767 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
TUBA1A-207ENST00000550767 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.55■□□□□ 0.4
TUBA1A-207ENST00000550767 PPLO60437 1756 aa17.55■□□□□ 0.4
TUBA1A-207ENST00000550767 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
TUBA1A-207ENST00000550767 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
TUBA1A-207ENST00000550767 IFT172Q9UG01 1749 aa17.53■□□□□ 0.4
TUBA1A-207ENST00000550767 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.4
TUBA1A-207ENST00000550767 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.4
TUBA1A-207ENST00000550767 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
TUBA1A-207ENST00000550767 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
TUBA1A-207ENST00000550767 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
TUBA1A-207ENST00000550767 RPGRIP1LQ68CZ1 1315 aa17.49■□□□□ 0.39
TUBA1A-207ENST00000550767 SOCS7O14512 581 aa17.49■□□□□ 0.39
TUBA1A-207ENST00000550767 HSPA1LP34931 641 aa17.49■□□□□ 0.39
TUBA1A-207ENST00000550767 BCANQ96GW7 911 aa17.49■□□□□ 0.39
TUBA1A-207ENST00000550767 XIRP1Q702N8 1843 aaKnown RBP17.48■□□□□ 0.39
TUBA1A-207ENST00000550767 DIP2AQ14689 1571 aa17.48■□□□□ 0.39
TUBA1A-207ENST00000550767 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
TUBA1A-207ENST00000550767 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
TUBA1A-207ENST00000550767 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
TUBA1A-207ENST00000550767 KCNA6P17658 529 aa17.47■□□□□ 0.39
TUBA1A-207ENST00000550767 NRXN3Q9Y4C0 1643 aa17.47■□□□□ 0.39
TUBA1A-207ENST00000550767 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
TUBA1A-207ENST00000550767 VGFO15240 615 aaPredicted RBP17.44■□□□□ 0.38
TUBA1A-207ENST00000550767 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
TUBA1A-207ENST00000550767 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
TUBA1A-207ENST00000550767 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
TUBA1A-207ENST00000550767 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
TUBA1A-207ENST00000550767 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
TUBA1A-207ENST00000550767 NKTRP30414 1462 aaKnown RBP17.41■□□□□ 0.38
TUBA1A-207ENST00000550767 MYOM2P54296 1465 aa17.41■□□□□ 0.38
TUBA1A-207ENST00000550767 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
TUBA1A-207ENST00000550767 TBX22Q9Y458 520 aa17.4■□□□□ 0.38
TUBA1A-207ENST00000550767 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
TUBA1A-207ENST00000550767 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
TUBA1A-207ENST00000550767 LAMC1P11047 1609 aa17.37■□□□□ 0.37
TUBA1A-207ENST00000550767 PIK3C2GO75747 1445 aa17.36■□□□□ 0.37
TUBA1A-207ENST00000550767 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
TUBA1A-207ENST00000550767 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
TUBA1A-207ENST00000550767 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
TUBA1A-207ENST00000550767 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
TUBA1A-207ENST00000550767 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
TUBA1A-207ENST00000550767 MED1Q15648 1581 aaPredicted RBP17.34■□□□□ 0.37
TUBA1A-207ENST00000550767 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
TUBA1A-207ENST00000550767 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
TUBA1A-207ENST00000550767 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
TUBA1A-207ENST00000550767 METP08581 1390 aa17.33■□□□□ 0.36
TUBA1A-207ENST00000550767 MSH6P52701 1360 aa17.33■□□□□ 0.36
TUBA1A-207ENST00000550767 KDM2AQ9Y2K7 1162 aa17.32■□□□□ 0.36
TUBA1A-207ENST00000550767 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
TUBA1A-207ENST00000550767 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
TUBA1A-207ENST00000550767 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
TUBA1A-207ENST00000550767 ASXL1Q8IXJ9 1541 aa17.29■□□□□ 0.36
TUBA1A-207ENST00000550767 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
TUBA1A-207ENST00000550767 PHF23Q9BUL5 403 aaPredicted RBP17.28■□□□□ 0.36
TUBA1A-207ENST00000550767 KNDC1Q76NI1 1749 aa17.28■□□□□ 0.36
TUBA1A-207ENST00000550767 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
TUBA1A-207ENST00000550767 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.36
TUBA1A-207ENST00000550767 C14orf93Q9H972 538 aaKnown RBP17.27■□□□□ 0.35
TUBA1A-207ENST00000550767 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.35
TUBA1A-207ENST00000550767 TONSLQ96HA7 1378 aa17.26■□□□□ 0.35
TUBA1A-207ENST00000550767 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
TUBA1A-207ENST00000550767 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
TUBA1A-207ENST00000550767 PRAG1Q86YV5 1406 aa17.25■□□□□ 0.35
TUBA1A-207ENST00000550767 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
TUBA1A-207ENST00000550767 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
TUBA1A-207ENST00000550767 C14orf37Q86TY3 774 aa17.24■□□□□ 0.35
TUBA1A-207ENST00000550767 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
TUBA1A-207ENST00000550767 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.23■□□□□ 0.35
TUBA1A-207ENST00000550767 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
TUBA1A-207ENST00000550767 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
TUBA1A-207ENST00000550767 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
TUBA1A-207ENST00000550767 TMEM132EQ6IEE7 984 aa17.22■□□□□ 0.35
TUBA1A-207ENST00000550767 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
TUBA1A-207ENST00000550767 NALCNQ8IZF0 1738 aa17.21■□□□□ 0.35
TUBA1A-207ENST00000550767 TECPR2O15040 1411 aa17.21■□□□□ 0.35
TUBA1A-207ENST00000550767 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
TUBA1A-207ENST00000550767 ATF3P18847 181 aa17.2■□□□□ 0.34
TUBA1A-207ENST00000550767 ROBO2Q9HCK4 1378 aa17.2■□□□□ 0.34
TUBA1A-207ENST00000550767 STK26Q9P289 416 aa17.19■□□□□ 0.34
TUBA1A-207ENST00000550767 PHLPP1O60346 1717 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms