RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 ST18O60284 1047 aa9.46□□□□□ -0.9
RAB3IP-213ENST00000550647 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
RAB3IP-213ENST00000550647 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
RAB3IP-213ENST00000550647 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
RAB3IP-213ENST00000550647 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
RAB3IP-213ENST00000550647 POTEMA6NI47 508 aa9.45□□□□□ -0.9
RAB3IP-213ENST00000550647 FBXO31Q5XUX0 539 aaPredicted RBP9.45□□□□□ -0.9
RAB3IP-213ENST00000550647 COL9A1P20849 921 aa9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 DNAJB2P25686 324 aa9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 POTEGQ6S5H5 508 aa9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
RAB3IP-213ENST00000550647 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 HRCP23327 699 aa9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 TMEM134Q9H6X4 195 aa9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
RAB3IP-213ENST00000550647 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-213ENST00000550647 ATP1B4Q9UN42 357 aaPredicted RBP9.42□□□□□ -0.9
RAB3IP-213ENST00000550647 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
RAB3IP-213ENST00000550647 LILRB3O75022 631 aa9.41□□□□□ -0.9
RAB3IP-213ENST00000550647 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
RAB3IP-213ENST00000550647 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.9
RAB3IP-213ENST00000550647 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
RAB3IP-213ENST00000550647 PTPREP23469 700 aa9.4□□□□□ -0.9
RAB3IP-213ENST00000550647 CCDC97Q96F63 343 aaPredicted RBP9.4□□□□□ -0.9
RAB3IP-213ENST00000550647 PRPF38BQ5VTL8 546 aaKnown RBP9.39□□□□□ -0.91
RAB3IP-213ENST00000550647 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
RAB3IP-213ENST00000550647 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
RAB3IP-213ENST00000550647 TATDN2Q93075 761 aa9.39□□□□□ -0.91
RAB3IP-213ENST00000550647 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
RAB3IP-213ENST00000550647 C3orf80F5H4A9 247 aa9.38□□□□□ -0.91
RAB3IP-213ENST00000550647 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
RAB3IP-213ENST00000550647 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
RAB3IP-213ENST00000550647 USP46P62068 366 aa9.37□□□□□ -0.91
RAB3IP-213ENST00000550647 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-213ENST00000550647 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
RAB3IP-213ENST00000550647 EMP3P54852 163 aa9.36□□□□□ -0.91
RAB3IP-213ENST00000550647 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
RAB3IP-213ENST00000550647 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
RAB3IP-213ENST00000550647 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
RAB3IP-213ENST00000550647 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-213ENST00000550647 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
RAB3IP-213ENST00000550647 QPCTQ16769 361 aa9.34□□□□□ -0.91
RAB3IP-213ENST00000550647 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
RAB3IP-213ENST00000550647 KDM4AO75164 1064 aa9.32□□□□□ -0.92
RAB3IP-213ENST00000550647 GCGRP47871 477 aa9.32□□□□□ -0.92
RAB3IP-213ENST00000550647 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
RAB3IP-213ENST00000550647 PCDHB15Q9Y5E8 787 aa9.32□□□□□ -0.92
RAB3IP-213ENST00000550647 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
RAB3IP-213ENST00000550647 PPP1R15AO75807 674 aaPredicted RBP9.31□□□□□ -0.92
RAB3IP-213ENST00000550647 USP17L8P0C7I0 530 aa9.31□□□□□ -0.92
RAB3IP-213ENST00000550647 NDUFV2P19404 249 aa9.31□□□□□ -0.92
RAB3IP-213ENST00000550647 RTL5Q5HYW3 569 aaPredicted RBP9.31□□□□□ -0.92
RAB3IP-213ENST00000550647 HOXA2O43364 376 aa9.3□□□□□ -0.92
RAB3IP-213ENST00000550647 RSPH4AQ5TD94 716 aa9.3□□□□□ -0.92
RAB3IP-213ENST00000550647 ZBTB3Q9H5J0 574 aa9.3□□□□□ -0.92
RAB3IP-213ENST00000550647 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
RAB3IP-213ENST00000550647 AP1G2O75843 785 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
RAB3IP-213ENST00000550647 CSPP1Q1MSJ5 1256 aa9.27□□□□□ -0.93
RAB3IP-213ENST00000550647 ZBED2Q9BTP6 218 aa9.27□□□□□ -0.93
RAB3IP-213ENST00000550647 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
RAB3IP-213ENST00000550647 ERBB3P21860 1342 aa9.27□□□□□ -0.93
RAB3IP-213ENST00000550647 FDX1P10109 184 aa9.26□□□□□ -0.93
RAB3IP-213ENST00000550647 ABL2P42684 1182 aa9.26□□□□□ -0.93
RAB3IP-213ENST00000550647 PROX2Q3B8N5 592 aa9.26□□□□□ -0.93
RAB3IP-213ENST00000550647 CABLES1Q8TDN4 633 aa9.26□□□□□ -0.93
RAB3IP-213ENST00000550647 FAM205CA6NFA0 338 aa9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 NUTM2BA6NNL0 878 aaPredicted RBP9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 NUTM2EB1AL46 878 aaPredicted RBP9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 NUTM2DQ5VT03 806 aaPredicted RBP9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 NUTM2AQ8IVF1 878 aaPredicted RBP9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 CDAN1Q8IWY9 1227 aa9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 GLMNQ92990 594 aa9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 CALR3Q96L12 384 aaKnown RBP9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
RAB3IP-213ENST00000550647 SMAPO00193 183 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 GPR37L1O60883 481 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 SLC10A3P09131 477 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 IRF5Q13568 498 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 HS3ST6Q96QI5 342 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 RABGEF1Q9UJ41 708 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
RAB3IP-213ENST00000550647 WASHC4Q2M389 1173 aa9.23□□□□□ -0.93
RAB3IP-213ENST00000550647 POM121CA8CG34 1229 aa9.22□□□□□ -0.93
RAB3IP-213ENST00000550647 RETREG2Q8NC44 543 aa9.22□□□□□ -0.93
RAB3IP-213ENST00000550647 TRIM34Q9BYJ4 488 aa9.22□□□□□ -0.93
RAB3IP-213ENST00000550647 CCDC9Q9Y3X0 531 aaKnown RBP9.22□□□□□ -0.93
RAB3IP-213ENST00000550647 PDE4CQ08493 712 aa9.21□□□□□ -0.94
RAB3IP-213ENST00000550647 MTMR2Q13614 643 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms