RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
TUBA1A-206ENST00000550254 PLEKHG1Q9ULL1 1385 aa26.86■■□□□ 1.89
TUBA1A-206ENST00000550254 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
TUBA1A-206ENST00000550254 SLC26A8Q96RN1 970 aa26.86■■□□□ 1.89
TUBA1A-206ENST00000550254 NUTM2DQ5VT03 806 aaPredicted RBP26.84■■□□□ 1.89
TUBA1A-206ENST00000550254 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
TUBA1A-206ENST00000550254 LRRC7Q96NW7 1537 aa26.84■■□□□ 1.89
TUBA1A-206ENST00000550254 KIF1BO60333 1816 aa26.83■■□□□ 1.89
TUBA1A-206ENST00000550254 PPP1R15AO75807 674 aaPredicted RBP26.83■■□□□ 1.89
TUBA1A-206ENST00000550254 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
TUBA1A-206ENST00000550254 FOXD1Q16676 465 aa26.82■■□□□ 1.88
TUBA1A-206ENST00000550254 MPHOSPH9Q99550 1183 aa26.82■■□□□ 1.88
TUBA1A-206ENST00000550254 RAB3GAP2Q9H2M9 1393 aa26.81■■□□□ 1.88
TUBA1A-206ENST00000550254 BCANQ96GW7 911 aa26.8■■□□□ 1.88
TUBA1A-206ENST00000550254 UBAP1LF5GYI3 381 aa26.79■■□□□ 1.88
TUBA1A-206ENST00000550254 XIRP1Q702N8 1843 aaKnown RBP26.79■■□□□ 1.88
TUBA1A-206ENST00000550254 ACIN1Q9UKV3 1341 aaKnown RBP26.77■■□□□ 1.88
TUBA1A-206ENST00000550254 KCNA6P17658 529 aa26.77■■□□□ 1.88
TUBA1A-206ENST00000550254 ADAMTS13Q76LX8 1427 aa26.76■■□□□ 1.87
TUBA1A-206ENST00000550254 ZNF326Q5BKZ1 582 aaKnown RBP26.76■■□□□ 1.87
TUBA1A-206ENST00000550254 NWD1Q149M9 1564 aa26.75■■□□□ 1.87
TUBA1A-206ENST00000550254 NEXMIFQ5QGS0 1516 aa26.75■■□□□ 1.87
TUBA1A-206ENST00000550254 CHD2O14647 1828 aaKnown RBP26.75■■□□□ 1.87
TUBA1A-206ENST00000550254 TBX22Q9Y458 520 aa26.74■■□□□ 1.87
TUBA1A-206ENST00000550254 ALKQ9UM73 1620 aa26.73■■□□□ 1.87
TUBA1A-206ENST00000550254 NRXN3Q9Y4C0 1643 aa26.72■■□□□ 1.87
TUBA1A-206ENST00000550254 DIP2AQ14689 1571 aa26.71■■□□□ 1.87
TUBA1A-206ENST00000550254 TOM1O60784 492 aa26.69■■□□□ 1.86
TUBA1A-206ENST00000550254 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
TUBA1A-206ENST00000550254 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
TUBA1A-206ENST00000550254 CCDC144AA2RUR9 1427 aa26.66■■□□□ 1.86
TUBA1A-206ENST00000550254 TMEM94Q12767 1356 aa26.66■■□□□ 1.86
TUBA1A-206ENST00000550254 HRCP23327 699 aa26.65■■□□□ 1.86
TUBA1A-206ENST00000550254 PROSER2Q86WR7 435 aaPredicted RBP26.65■■□□□ 1.86
TUBA1A-206ENST00000550254 PPLO60437 1756 aa26.64■■□□□ 1.86
TUBA1A-206ENST00000550254 PIK3R4Q99570 1358 aa26.64■■□□□ 1.86
TUBA1A-206ENST00000550254 RBM33Q96EV2 1170 aaKnown RBP26.63■■□□□ 1.85
TUBA1A-206ENST00000550254 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
TUBA1A-206ENST00000550254 PTPRUQ92729 1446 aa26.62■■□□□ 1.85
TUBA1A-206ENST00000550254 RPGRIP1LQ68CZ1 1315 aa26.62■■□□□ 1.85
TUBA1A-206ENST00000550254 SPATA31E1Q6ZUB1 1445 aa26.61■■□□□ 1.85
TUBA1A-206ENST00000550254 SCAF1Q9H7N4 1312 aaKnown RBP26.59■■□□□ 1.85
TUBA1A-206ENST00000550254 VGFO15240 615 aaPredicted RBP26.58■■□□□ 1.85
TUBA1A-206ENST00000550254 IFT172Q9UG01 1749 aa26.57■■□□□ 1.84
TUBA1A-206ENST00000550254 METP08581 1390 aa26.57■■□□□ 1.84
TUBA1A-206ENST00000550254 AMOTL2Q9Y2J4 779 aa26.56■■□□□ 1.84
TUBA1A-206ENST00000550254 SETD1AO15047 1707 aaKnown RBP26.56■■□□□ 1.84
TUBA1A-206ENST00000550254 RGL3Q3MIN7 710 aa26.55■■□□□ 1.84
TUBA1A-206ENST00000550254 XRN1Q8IZH2 1706 aaKnown RBP26.55■■□□□ 1.84
TUBA1A-206ENST00000550254 ANKRD30BQ9BXX2 1392 aa26.52■■□□□ 1.84
TUBA1A-206ENST00000550254 NCOA3Q9Y6Q9 1424 aa26.5■■□□□ 1.83
TUBA1A-206ENST00000550254 HSPA1LP34931 641 aa26.5■■□□□ 1.83
TUBA1A-206ENST00000550254 ADGRF5Q8IZF2 1346 aa26.49■■□□□ 1.83
TUBA1A-206ENST00000550254 MSH6P52701 1360 aa26.48■■□□□ 1.83
TUBA1A-206ENST00000550254 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.82
TUBA1A-206ENST00000550254 FAM135BQ49AJ0 1406 aa26.42■■□□□ 1.82
TUBA1A-206ENST00000550254 ROBO1Q9Y6N7 1651 aa26.41■■□□□ 1.82
TUBA1A-206ENST00000550254 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
TUBA1A-206ENST00000550254 C19orf44Q9H6X5 657 aa26.4■■□□□ 1.82
TUBA1A-206ENST00000550254 PIK3C2GO75747 1445 aa26.39■■□□□ 1.82
TUBA1A-206ENST00000550254 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
TUBA1A-206ENST00000550254 MYOM2P54296 1465 aa26.37■■□□□ 1.81
TUBA1A-206ENST00000550254 NRXN1Q9ULB1 1477 aa26.37■■□□□ 1.81
TUBA1A-206ENST00000550254 PRAG1Q86YV5 1406 aa26.37■■□□□ 1.81
TUBA1A-206ENST00000550254 ASXL1Q8IXJ9 1541 aa26.35■■□□□ 1.81
TUBA1A-206ENST00000550254 PTCH1Q13635 1447 aa26.35■■□□□ 1.81
TUBA1A-206ENST00000550254 ROBO2Q9HCK4 1378 aa26.34■■□□□ 1.81
TUBA1A-206ENST00000550254 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
TUBA1A-206ENST00000550254 CADPS2Q86UW7 1296 aa26.33■■□□□ 1.81
TUBA1A-206ENST00000550254 ATF3P18847 181 aa26.32■■□□□ 1.8
TUBA1A-206ENST00000550254 DCCP43146 1447 aa26.31■■□□□ 1.8
TUBA1A-206ENST00000550254 ADGRL3Q9HAR2 1447 aa26.31■■□□□ 1.8
TUBA1A-206ENST00000550254 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
TUBA1A-206ENST00000550254 C14orf93Q9H972 538 aaKnown RBP26.3■■□□□ 1.8
TUBA1A-206ENST00000550254 LAMC1P11047 1609 aa26.28■■□□□ 1.8
TUBA1A-206ENST00000550254 KNDC1Q76NI1 1749 aa26.28■■□□□ 1.8
TUBA1A-206ENST00000550254 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
TUBA1A-206ENST00000550254 LRPPRCP42704 1394 aaKnown RBP26.27■■□□□ 1.8
TUBA1A-206ENST00000550254 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
TUBA1A-206ENST00000550254 TECPR2O15040 1411 aa26.26■■□□□ 1.79
TUBA1A-206ENST00000550254 MST1RQ04912 1400 aa26.25■■□□□ 1.79
TUBA1A-206ENST00000550254 DCAF11Q8TEB1 546 aa26.25■■□□□ 1.79
TUBA1A-206ENST00000550254 STK26Q9P289 416 aa26.25■■□□□ 1.79
TUBA1A-206ENST00000550254 ABCC11Q96J66 1382 aa26.24■■□□□ 1.79
TUBA1A-206ENST00000550254 DISP3Q9P2K9 1392 aa26.24■■□□□ 1.79
TUBA1A-206ENST00000550254 TRIM26Q12899 539 aaPredicted RBP26.24■■□□□ 1.79
TUBA1A-206ENST00000550254 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
TUBA1A-206ENST00000550254 PHLPP1O60346 1717 aa26.24■■□□□ 1.79
TUBA1A-206ENST00000550254 YTHDC2Q9H6S0 1430 aaKnown RBP26.23■■□□□ 1.79
TUBA1A-206ENST00000550254 MED1Q15648 1581 aaPredicted RBP26.21■■□□□ 1.79
TUBA1A-206ENST00000550254 BRINP3Q76B58 766 aa26.2■■□□□ 1.78
TUBA1A-206ENST00000550254 WAPLQ7Z5K2 1190 aa26.2■■□□□ 1.78
TUBA1A-206ENST00000550254 STAC3Q96MF2 364 aa26.19■■□□□ 1.78
TUBA1A-206ENST00000550254 COL16A1Q07092 1604 aaPredicted RBP26.18■■□□□ 1.78
TUBA1A-206ENST00000550254 AHDC1Q5TGY3 1603 aaPredicted RBP26.18■■□□□ 1.78
TUBA1A-206ENST00000550254 PLEKHH1Q9ULM0 1364 aa26.18■■□□□ 1.78
TUBA1A-206ENST00000550254 ADGRB1O14514 1584 aa26.17■■□□□ 1.78
TUBA1A-206ENST00000550254 SIRT1Q96EB6 747 aa26.15■■□□□ 1.78
TUBA1A-206ENST00000550254 C1orf167Q5SNV9 1468 aa26.14■■□□□ 1.78
TUBA1A-206ENST00000550254 CDC42BPGQ6DT37 1551 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms