RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
ARFGAP1-223ENST00000550188 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.79■□□□□ 0.44
ARFGAP1-223ENST00000550188 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.43
ARFGAP1-223ENST00000550188 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.43
ARFGAP1-223ENST00000550188 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
ARFGAP1-223ENST00000550188 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
ARFGAP1-223ENST00000550188 BCANQ96GW7 911 aa17.74■□□□□ 0.43
ARFGAP1-223ENST00000550188 FOXD1Q16676 465 aa17.73■□□□□ 0.43
ARFGAP1-223ENST00000550188 SLC26A8Q96RN1 970 aa17.73■□□□□ 0.43
ARFGAP1-223ENST00000550188 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
ARFGAP1-223ENST00000550188 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
ARFGAP1-223ENST00000550188 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
ARFGAP1-223ENST00000550188 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
ARFGAP1-223ENST00000550188 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
ARFGAP1-223ENST00000550188 KCNA6P17658 529 aa17.68■□□□□ 0.42
ARFGAP1-223ENST00000550188 HRCP23327 699 aa17.68■□□□□ 0.42
ARFGAP1-223ENST00000550188 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-223ENST00000550188 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
ARFGAP1-223ENST00000550188 STRCP1A6NGW2 1772 aa17.67■□□□□ 0.42
ARFGAP1-223ENST00000550188 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
ARFGAP1-223ENST00000550188 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
ARFGAP1-223ENST00000550188 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
ARFGAP1-223ENST00000550188 ADAMTS13Q76LX8 1427 aa17.66■□□□□ 0.42
ARFGAP1-223ENST00000550188 NKTRP30414 1462 aaKnown RBP17.65■□□□□ 0.42
ARFGAP1-223ENST00000550188 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
ARFGAP1-223ENST00000550188 KIF1BO60333 1816 aa17.64■□□□□ 0.41
ARFGAP1-223ENST00000550188 SETBP1Q9Y6X0 1596 aa17.64■□□□□ 0.41
ARFGAP1-223ENST00000550188 RPGRIP1LQ68CZ1 1315 aa17.64■□□□□ 0.41
ARFGAP1-223ENST00000550188 TOM1O60784 492 aa17.63■□□□□ 0.41
ARFGAP1-223ENST00000550188 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
ARFGAP1-223ENST00000550188 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
ARFGAP1-223ENST00000550188 TMEM94Q12767 1356 aa17.61■□□□□ 0.41
ARFGAP1-223ENST00000550188 SPATA31E1Q6ZUB1 1445 aa17.61■□□□□ 0.41
ARFGAP1-223ENST00000550188 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
ARFGAP1-223ENST00000550188 NRXN3Q9Y4C0 1643 aa17.59■□□□□ 0.41
ARFGAP1-223ENST00000550188 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
ARFGAP1-223ENST00000550188 SCAF1Q9H7N4 1312 aaKnown RBP17.56■□□□□ 0.4
ARFGAP1-223ENST00000550188 PIP4K2BP78356 416 aa17.56■□□□□ 0.4
ARFGAP1-223ENST00000550188 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
ARFGAP1-223ENST00000550188 RGL3Q3MIN7 710 aa17.56■□□□□ 0.4
ARFGAP1-223ENST00000550188 ALKQ9UM73 1620 aa17.55■□□□□ 0.4
ARFGAP1-223ENST00000550188 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
ARFGAP1-223ENST00000550188 CHD2O14647 1828 aaKnown RBP17.55■□□□□ 0.4
ARFGAP1-223ENST00000550188 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
ARFGAP1-223ENST00000550188 METP08581 1390 aa17.54■□□□□ 0.4
ARFGAP1-223ENST00000550188 NCOA3Q9Y6Q9 1424 aa17.54■□□□□ 0.4
ARFGAP1-223ENST00000550188 PPLO60437 1756 aa17.53■□□□□ 0.4
ARFGAP1-223ENST00000550188 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
ARFGAP1-223ENST00000550188 MSH6P52701 1360 aa17.53■□□□□ 0.4
ARFGAP1-223ENST00000550188 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
ARFGAP1-223ENST00000550188 ADGRF5Q8IZF2 1346 aa17.5■□□□□ 0.39
ARFGAP1-223ENST00000550188 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
ARFGAP1-223ENST00000550188 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
ARFGAP1-223ENST00000550188 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
ARFGAP1-223ENST00000550188 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
ARFGAP1-223ENST00000550188 MYOM2P54296 1465 aa17.47■□□□□ 0.39
ARFGAP1-223ENST00000550188 SETD1AO15047 1707 aaKnown RBP17.46■□□□□ 0.39
ARFGAP1-223ENST00000550188 PTCH1Q13635 1447 aa17.46■□□□□ 0.39
ARFGAP1-223ENST00000550188 PRAG1Q86YV5 1406 aa17.46■□□□□ 0.39
ARFGAP1-223ENST00000550188 HSPA1LP34931 641 aa17.45■□□□□ 0.38
ARFGAP1-223ENST00000550188 C19orf44Q9H6X5 657 aa17.45■□□□□ 0.38
ARFGAP1-223ENST00000550188 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
ARFGAP1-223ENST00000550188 FAM135BQ49AJ0 1406 aa17.44■□□□□ 0.38
ARFGAP1-223ENST00000550188 DCCP43146 1447 aa17.43■□□□□ 0.38
ARFGAP1-223ENST00000550188 ATF3P18847 181 aa17.42■□□□□ 0.38
ARFGAP1-223ENST00000550188 CADPS2Q86UW7 1296 aa17.42■□□□□ 0.38
ARFGAP1-223ENST00000550188 SLAIN2Q9P270 581 aa17.42■□□□□ 0.38
ARFGAP1-223ENST00000550188 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
ARFGAP1-223ENST00000550188 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
ARFGAP1-223ENST00000550188 STAC3Q96MF2 364 aa17.4■□□□□ 0.38
ARFGAP1-223ENST00000550188 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.37
ARFGAP1-223ENST00000550188 DCAF11Q8TEB1 546 aa17.39■□□□□ 0.37
ARFGAP1-223ENST00000550188 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
ARFGAP1-223ENST00000550188 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
ARFGAP1-223ENST00000550188 LAMC1P11047 1609 aa17.38■□□□□ 0.37
ARFGAP1-223ENST00000550188 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
ARFGAP1-223ENST00000550188 TECPR2O15040 1411 aa17.38■□□□□ 0.37
ARFGAP1-223ENST00000550188 ROBO1Q9Y6N7 1651 aa17.37■□□□□ 0.37
ARFGAP1-223ENST00000550188 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
ARFGAP1-223ENST00000550188 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
ARFGAP1-223ENST00000550188 ABCC11Q96J66 1382 aa17.37■□□□□ 0.37
ARFGAP1-223ENST00000550188 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
ARFGAP1-223ENST00000550188 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
ARFGAP1-223ENST00000550188 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
ARFGAP1-223ENST00000550188 STK26Q9P289 416 aa17.35■□□□□ 0.37
ARFGAP1-223ENST00000550188 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
ARFGAP1-223ENST00000550188 MST1RQ04912 1400 aa17.33■□□□□ 0.36
ARFGAP1-223ENST00000550188 KNDC1Q76NI1 1749 aa17.31■□□□□ 0.36
ARFGAP1-223ENST00000550188 BRINP3Q76B58 766 aa17.3■□□□□ 0.36
ARFGAP1-223ENST00000550188 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
ARFGAP1-223ENST00000550188 PCGF6Q9BYE7 350 aa17.3■□□□□ 0.36
ARFGAP1-223ENST00000550188 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
ARFGAP1-223ENST00000550188 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
ARFGAP1-223ENST00000550188 PLEKHH1Q9ULM0 1364 aa17.28■□□□□ 0.36
ARFGAP1-223ENST00000550188 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
ARFGAP1-223ENST00000550188 DISP3Q9P2K9 1392 aa17.28■□□□□ 0.36
ARFGAP1-223ENST00000550188 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
ARFGAP1-223ENST00000550188 AHDC1Q5TGY3 1603 aaPredicted RBP17.27■□□□□ 0.36
ARFGAP1-223ENST00000550188 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
ARFGAP1-223ENST00000550188 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms