RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RIMS2Q9UQ26 1411 aa28.52■■■□□ 2.16
DDX54-207ENST00000550016 CCDC144AA2RUR9 1427 aa28.51■■■□□ 2.15
DDX54-207ENST00000550016 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
DDX54-207ENST00000550016 ZNF326Q5BKZ1 582 aaKnown RBP28.47■■■□□ 2.15
DDX54-207ENST00000550016 ANKRD30BQ9BXX2 1392 aa28.45■■■□□ 2.14
DDX54-207ENST00000550016 PPP1R15AO75807 674 aaPredicted RBP28.44■■■□□ 2.14
DDX54-207ENST00000550016 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
DDX54-207ENST00000550016 PLEKHG1Q9ULL1 1385 aa28.4■■■□□ 2.14
DDX54-207ENST00000550016 NEXMIFQ5QGS0 1516 aa28.4■■■□□ 2.14
DDX54-207ENST00000550016 BCANQ96GW7 911 aa28.39■■■□□ 2.14
DDX54-207ENST00000550016 ZNF335Q9H4Z2 1342 aaPredicted RBP28.39■■■□□ 2.13
DDX54-207ENST00000550016 PPLO60437 1756 aa28.38■■■□□ 2.13
DDX54-207ENST00000550016 RPGRIP1LQ68CZ1 1315 aa28.38■■■□□ 2.13
DDX54-207ENST00000550016 SPATA31E1Q6ZUB1 1445 aa28.37■■■□□ 2.13
DDX54-207ENST00000550016 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
DDX54-207ENST00000550016 RGL3Q3MIN7 710 aa28.34■■■□□ 2.13
DDX54-207ENST00000550016 SLC26A8Q96RN1 970 aa28.34■■■□□ 2.13
DDX54-207ENST00000550016 SENP3Q9H4L4 574 aaPredicted RBP28.33■■■□□ 2.13
DDX54-207ENST00000550016 IFT172Q9UG01 1749 aa28.32■■■□□ 2.12
DDX54-207ENST00000550016 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
DDX54-207ENST00000550016 PCGF6Q9BYE7 350 aa28.32■■■□□ 2.12
DDX54-207ENST00000550016 STRCP1A6NGW2 1772 aa28.31■■■□□ 2.12
DDX54-207ENST00000550016 CERKQ8TCT0 537 aa28.29■■■□□ 2.12
DDX54-207ENST00000550016 TBX22Q9Y458 520 aa28.29■■■□□ 2.12
DDX54-207ENST00000550016 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
DDX54-207ENST00000550016 SETBP1Q9Y6X0 1596 aa28.28■■■□□ 2.12
DDX54-207ENST00000550016 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
DDX54-207ENST00000550016 CHD2O14647 1828 aaKnown RBP28.27■■■□□ 2.12
DDX54-207ENST00000550016 ADAMTS13Q76LX8 1427 aa28.26■■■□□ 2.12
DDX54-207ENST00000550016 DHX57Q6P158 1386 aaKnown RBP28.26■■■□□ 2.12
DDX54-207ENST00000550016 CPS1P31327 1500 aa28.26■■■□□ 2.11
DDX54-207ENST00000550016 KCNA6P17658 529 aa28.21■■■□□ 2.11
DDX54-207ENST00000550016 PIK3R4Q99570 1358 aa28.18■■■□□ 2.1
DDX54-207ENST00000550016 IQSEC2Q5JU85 1478 aa28.18■■■□□ 2.1
DDX54-207ENST00000550016 ADGRF5Q8IZF2 1346 aa28.18■■■□□ 2.1
DDX54-207ENST00000550016 NWD1Q149M9 1564 aa28.17■■■□□ 2.1
DDX54-207ENST00000550016 SETD1AO15047 1707 aaKnown RBP28.15■■■□□ 2.1
DDX54-207ENST00000550016 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
DDX54-207ENST00000550016 MYOM2P54296 1465 aa28.14■■■□□ 2.09
DDX54-207ENST00000550016 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
DDX54-207ENST00000550016 XIRP1Q702N8 1843 aaKnown RBP28.13■■■□□ 2.09
DDX54-207ENST00000550016 NKTRP30414 1462 aaKnown RBP28.11■■■□□ 2.09
DDX54-207ENST00000550016 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
DDX54-207ENST00000550016 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
DDX54-207ENST00000550016 SIN3AQ96ST3 1273 aa28.11■■■□□ 2.09
DDX54-207ENST00000550016 METP08581 1390 aa28.11■■■□□ 2.09
DDX54-207ENST00000550016 PIK3C2GO75747 1445 aa28.09■■■□□ 2.09
DDX54-207ENST00000550016 NRXN1Q9ULB1 1477 aa28.09■■■□□ 2.09
DDX54-207ENST00000550016 PROSER2Q86WR7 435 aaPredicted RBP28.09■■■□□ 2.09
DDX54-207ENST00000550016 KDM2AQ9Y2K7 1162 aa28.09■■■□□ 2.09
DDX54-207ENST00000550016 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
DDX54-207ENST00000550016 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
DDX54-207ENST00000550016 XRN1Q8IZH2 1706 aaKnown RBP28.06■■■□□ 2.08
DDX54-207ENST00000550016 NEUROD1Q13562 356 aa28.06■■■□□ 2.08
DDX54-207ENST00000550016 FBXO41Q8TF61 875 aa28.05■■■□□ 2.08
DDX54-207ENST00000550016 LAMC1P11047 1609 aa28.04■■■□□ 2.08
DDX54-207ENST00000550016 TMEM94Q12767 1356 aa28.02■■■□□ 2.08
DDX54-207ENST00000550016 C14orf93Q9H972 538 aaKnown RBP28.02■■■□□ 2.08
DDX54-207ENST00000550016 CFAP70Q5T0N1 1121 aa27.98■■■□□ 2.07
DDX54-207ENST00000550016 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
DDX54-207ENST00000550016 L3MBTL2Q969R5 705 aa27.97■■■□□ 2.07
DDX54-207ENST00000550016 NCOA3Q9Y6Q9 1424 aa27.96■■■□□ 2.07
DDX54-207ENST00000550016 UBAP1LF5GYI3 381 aa27.96■■■□□ 2.07
DDX54-207ENST00000550016 TMEM132EQ6IEE7 984 aa27.95■■■□□ 2.06
DDX54-207ENST00000550016 ASXL1Q8IXJ9 1541 aa27.95■■■□□ 2.06
DDX54-207ENST00000550016 TOM1O60784 492 aa27.93■■■□□ 2.06
DDX54-207ENST00000550016 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
DDX54-207ENST00000550016 ILDR1Q86SU0 546 aaPredicted RBP27.92■■■□□ 2.06
DDX54-207ENST00000550016 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
DDX54-207ENST00000550016 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
DDX54-207ENST00000550016 KIAA1210Q9ULL0 1709 aa27.91■■■□□ 2.06
DDX54-207ENST00000550016 PTCH1Q13635 1447 aa27.91■■■□□ 2.06
DDX54-207ENST00000550016 STK26Q9P289 416 aa27.9■■■□□ 2.06
DDX54-207ENST00000550016 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
DDX54-207ENST00000550016 MSH6P52701 1360 aa27.89■■■□□ 2.06
DDX54-207ENST00000550016 ABCC11Q96J66 1382 aa27.89■■■□□ 2.06
DDX54-207ENST00000550016 C14orf37Q86TY3 774 aa27.89■■■□□ 2.06
DDX54-207ENST00000550016 CLSPNQ9HAW4 1339 aa27.89■■■□□ 2.05
DDX54-207ENST00000550016 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
DDX54-207ENST00000550016 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.88■■■□□ 2.05
DDX54-207ENST00000550016 TECPR2O15040 1411 aa27.86■■■□□ 2.05
DDX54-207ENST00000550016 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
DDX54-207ENST00000550016 ADGRB1O14514 1584 aa27.86■■■□□ 2.05
DDX54-207ENST00000550016 TONSLQ96HA7 1378 aa27.86■■■□□ 2.05
DDX54-207ENST00000550016 CCER1Q8TC90 406 aaPredicted RBP27.83■■■□□ 2.05
DDX54-207ENST00000550016 NALCNQ8IZF0 1738 aa27.83■■■□□ 2.05
DDX54-207ENST00000550016 SIRT1Q96EB6 747 aa27.82■■■□□ 2.04
DDX54-207ENST00000550016 PIP4K2BP78356 416 aa27.81■■■□□ 2.04
DDX54-207ENST00000550016 ADGRL3Q9HAR2 1447 aa27.79■■■□□ 2.04
DDX54-207ENST00000550016 ATF3P18847 181 aa27.79■■■□□ 2.04
DDX54-207ENST00000550016 FAM135BQ49AJ0 1406 aa27.78■■■□□ 2.04
DDX54-207ENST00000550016 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
DDX54-207ENST00000550016 WAPLQ7Z5K2 1190 aa27.78■■■□□ 2.04
DDX54-207ENST00000550016 CADPS2Q86UW7 1296 aa27.78■■■□□ 2.04
DDX54-207ENST00000550016 TRPM1Q7Z4N2 1603 aa27.78■■■□□ 2.04
DDX54-207ENST00000550016 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
DDX54-207ENST00000550016 DCCP43146 1447 aa27.77■■■□□ 2.04
DDX54-207ENST00000550016 NBPF1Q3BBV0 1214 aa27.76■■■□□ 2.03
DDX54-207ENST00000550016 SLAIN2Q9P270 581 aa27.75■■■□□ 2.03
DDX54-207ENST00000550016 TRAK1Q9UPV9 953 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms