RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CPS1P31327 1500 aa14.71□□□□□ -0.05
HDAC7-229ENST00000549883 FOXD1Q16676 465 aa14.71□□□□□ -0.05
HDAC7-229ENST00000549883 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
HDAC7-229ENST00000549883 LRRC7Q96NW7 1537 aa14.7□□□□□ -0.06
HDAC7-229ENST00000549883 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
HDAC7-229ENST00000549883 TRPM2O94759 1503 aa14.69□□□□□ -0.06
HDAC7-229ENST00000549883 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
HDAC7-229ENST00000549883 UBAP1LF5GYI3 381 aa14.68□□□□□ -0.06
HDAC7-229ENST00000549883 BCANQ96GW7 911 aa14.67□□□□□ -0.06
HDAC7-229ENST00000549883 SETD5Q9C0A6 1442 aa14.66□□□□□ -0.06
HDAC7-229ENST00000549883 KIF1BO60333 1816 aa14.66□□□□□ -0.06
HDAC7-229ENST00000549883 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
HDAC7-229ENST00000549883 RBM33Q96EV2 1170 aaKnown RBP14.66□□□□□ -0.06
HDAC7-229ENST00000549883 PPP1R15AO75807 674 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-229ENST00000549883 ADAMTS13Q76LX8 1427 aa14.65□□□□□ -0.06
HDAC7-229ENST00000549883 CHD2O14647 1828 aaKnown RBP14.64□□□□□ -0.07
HDAC7-229ENST00000549883 RAB3GAP2Q9H2M9 1393 aa14.64□□□□□ -0.07
HDAC7-229ENST00000549883 MPHOSPH9Q99550 1183 aa14.64□□□□□ -0.07
HDAC7-229ENST00000549883 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
HDAC7-229ENST00000549883 NEXMIFQ5QGS0 1516 aa14.62□□□□□ -0.07
HDAC7-229ENST00000549883 KCNA6P17658 529 aa14.62□□□□□ -0.07
HDAC7-229ENST00000549883 NWD1Q149M9 1564 aa14.62□□□□□ -0.07
HDAC7-229ENST00000549883 ZNF326Q5BKZ1 582 aaKnown RBP14.62□□□□□ -0.07
HDAC7-229ENST00000549883 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC7-229ENST00000549883 PIP4K2BP78356 416 aa14.61□□□□□ -0.07
HDAC7-229ENST00000549883 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
HDAC7-229ENST00000549883 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
HDAC7-229ENST00000549883 TBX22Q9Y458 520 aa14.59□□□□□ -0.07
HDAC7-229ENST00000549883 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
HDAC7-229ENST00000549883 PTPRUQ92729 1446 aa14.58□□□□□ -0.07
HDAC7-229ENST00000549883 PROSER2Q86WR7 435 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-229ENST00000549883 PPLO60437 1756 aa14.57□□□□□ -0.08
HDAC7-229ENST00000549883 SETBP1Q9Y6X0 1596 aa14.57□□□□□ -0.08
HDAC7-229ENST00000549883 TOM1O60784 492 aa14.57□□□□□ -0.08
HDAC7-229ENST00000549883 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
HDAC7-229ENST00000549883 NKTRP30414 1462 aaKnown RBP14.56□□□□□ -0.08
HDAC7-229ENST00000549883 HSPA1LP34931 641 aa14.55□□□□□ -0.08
HDAC7-229ENST00000549883 METP08581 1390 aa14.55□□□□□ -0.08
HDAC7-229ENST00000549883 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
HDAC7-229ENST00000549883 SPATA31E1Q6ZUB1 1445 aa14.54□□□□□ -0.08
HDAC7-229ENST00000549883 SETD1AO15047 1707 aaKnown RBP14.54□□□□□ -0.08
HDAC7-229ENST00000549883 IFT172Q9UG01 1749 aa14.53□□□□□ -0.08
HDAC7-229ENST00000549883 RGL3Q3MIN7 710 aa14.53□□□□□ -0.08
HDAC7-229ENST00000549883 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.08
HDAC7-229ENST00000549883 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.09
HDAC7-229ENST00000549883 PIK3R4Q99570 1358 aa14.5□□□□□ -0.09
HDAC7-229ENST00000549883 ADGRF5Q8IZF2 1346 aa14.5□□□□□ -0.09
HDAC7-229ENST00000549883 RPGRIP1LQ68CZ1 1315 aa14.49□□□□□ -0.09
HDAC7-229ENST00000549883 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-229ENST00000549883 VGFO15240 615 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-229ENST00000549883 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
HDAC7-229ENST00000549883 ROBO1Q9Y6N7 1651 aa14.47□□□□□ -0.09
HDAC7-229ENST00000549883 MSH6P52701 1360 aa14.47□□□□□ -0.09
HDAC7-229ENST00000549883 HRCP23327 699 aa14.45□□□□□ -0.1
HDAC7-229ENST00000549883 C14orf37Q86TY3 774 aa14.45□□□□□ -0.1
HDAC7-229ENST00000549883 ACIN1Q9UKV3 1341 aaKnown RBP14.44□□□□□ -0.1
HDAC7-229ENST00000549883 NALCNQ8IZF0 1738 aa14.44□□□□□ -0.1
HDAC7-229ENST00000549883 FAM135BQ49AJ0 1406 aa14.43□□□□□ -0.1
HDAC7-229ENST00000549883 ASXL1Q8IXJ9 1541 aa14.43□□□□□ -0.1
HDAC7-229ENST00000549883 SLAIN2Q9P270 581 aa14.43□□□□□ -0.1
HDAC7-229ENST00000549883 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
HDAC7-229ENST00000549883 NCOA3Q9Y6Q9 1424 aa14.42□□□□□ -0.1
HDAC7-229ENST00000549883 TMEM132EQ6IEE7 984 aa14.41□□□□□ -0.1
HDAC7-229ENST00000549883 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
HDAC7-229ENST00000549883 DISP3Q9P2K9 1392 aa14.41□□□□□ -0.1
HDAC7-229ENST00000549883 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
HDAC7-229ENST00000549883 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
HDAC7-229ENST00000549883 STK26Q9P289 416 aa14.39□□□□□ -0.11
HDAC7-229ENST00000549883 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
HDAC7-229ENST00000549883 ATF3P18847 181 aa14.38□□□□□ -0.11
HDAC7-229ENST00000549883 ADGRL3Q9HAR2 1447 aa14.38□□□□□ -0.11
HDAC7-229ENST00000549883 PHLPP1O60346 1717 aa14.38□□□□□ -0.11
HDAC7-229ENST00000549883 MYOM2P54296 1465 aa14.38□□□□□ -0.11
HDAC7-229ENST00000549883 CFAP70Q5T0N1 1121 aa14.37□□□□□ -0.11
HDAC7-229ENST00000549883 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
HDAC7-229ENST00000549883 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
HDAC7-229ENST00000549883 DHX57Q6P158 1386 aaKnown RBP14.36□□□□□ -0.11
HDAC7-229ENST00000549883 MST1RQ04912 1400 aa14.36□□□□□ -0.11
HDAC7-229ENST00000549883 PRAG1Q86YV5 1406 aa14.36□□□□□ -0.11
HDAC7-229ENST00000549883 ILDR2Q71H61 639 aa14.36□□□□□ -0.11
HDAC7-229ENST00000549883 CADPS2Q86UW7 1296 aa14.36□□□□□ -0.11
HDAC7-229ENST00000549883 PLEKHH1Q9ULM0 1364 aa14.35□□□□□ -0.11
HDAC7-229ENST00000549883 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
HDAC7-229ENST00000549883 C14orf93Q9H972 538 aaKnown RBP14.35□□□□□ -0.11
HDAC7-229ENST00000549883 KNDC1Q76NI1 1749 aa14.35□□□□□ -0.11
HDAC7-229ENST00000549883 LRPPRCP42704 1394 aaKnown RBP14.34□□□□□ -0.11
HDAC7-229ENST00000549883 COL16A1Q07092 1604 aaPredicted RBP14.34□□□□□ -0.11
HDAC7-229ENST00000549883 DCCP43146 1447 aa14.34□□□□□ -0.11
HDAC7-229ENST00000549883 BRINP3Q76B58 766 aa14.34□□□□□ -0.11
HDAC7-229ENST00000549883 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
HDAC7-229ENST00000549883 YTHDC2Q9H6S0 1430 aaKnown RBP14.33□□□□□ -0.11
HDAC7-229ENST00000549883 TECPR2O15040 1411 aa14.32□□□□□ -0.12
HDAC7-229ENST00000549883 DDX17Q92841 729 aaKnown RBP14.32□□□□□ -0.12
HDAC7-229ENST00000549883 LAMC1P11047 1609 aa14.32□□□□□ -0.12
HDAC7-229ENST00000549883 ABCC11Q96J66 1382 aa14.31□□□□□ -0.12
HDAC7-229ENST00000549883 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
HDAC7-229ENST00000549883 AHDC1Q5TGY3 1603 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-229ENST00000549883 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
HDAC7-229ENST00000549883 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
HDAC7-229ENST00000549883 ORAI2Q96SN7 254 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms