RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 RIMS2Q9UQ26 1411 aa25.72■■□□□ 1.71
RACGAP1-213ENST00000548598 PLEKHG1Q9ULL1 1385 aa25.71■■□□□ 1.71
RACGAP1-213ENST00000548598 NKTRP30414 1462 aaKnown RBP25.67■■□□□ 1.7
RACGAP1-213ENST00000548598 SLC26A8Q96RN1 970 aa25.65■■□□□ 1.7
RACGAP1-213ENST00000548598 TRPM2O94759 1503 aa25.64■■□□□ 1.7
RACGAP1-213ENST00000548598 KCNA6P17658 529 aa25.64■■□□□ 1.7
RACGAP1-213ENST00000548598 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
RACGAP1-213ENST00000548598 PIP4K2BP78356 416 aa25.63■■□□□ 1.69
RACGAP1-213ENST00000548598 DIP2AQ14689 1571 aa25.63■■□□□ 1.69
RACGAP1-213ENST00000548598 HDGFP51858 240 aaKnown RBP25.62■■□□□ 1.69
RACGAP1-213ENST00000548598 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.61■■□□□ 1.69
RACGAP1-213ENST00000548598 CLTCL1P53675 1640 aa25.61■■□□□ 1.69
RACGAP1-213ENST00000548598 ADAMTS13Q76LX8 1427 aa25.61■■□□□ 1.69
RACGAP1-213ENST00000548598 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
RACGAP1-213ENST00000548598 TMEM94Q12767 1356 aa25.59■■□□□ 1.69
RACGAP1-213ENST00000548598 PPP1R15AO75807 674 aaPredicted RBP25.59■■□□□ 1.69
RACGAP1-213ENST00000548598 CHGAP10645 457 aaKnown RBP25.59■■□□□ 1.69
RACGAP1-213ENST00000548598 HSPA1LP34931 641 aa25.59■■□□□ 1.69
RACGAP1-213ENST00000548598 DISP3Q9P2K9 1392 aa25.58■■□□□ 1.69
RACGAP1-213ENST00000548598 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
RACGAP1-213ENST00000548598 TBX22Q9Y458 520 aa25.55■■□□□ 1.68
RACGAP1-213ENST00000548598 SETBP1Q9Y6X0 1596 aa25.54■■□□□ 1.68
RACGAP1-213ENST00000548598 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
RACGAP1-213ENST00000548598 BCANQ96GW7 911 aa25.53■■□□□ 1.68
RACGAP1-213ENST00000548598 KIF1BO60333 1816 aa25.53■■□□□ 1.68
RACGAP1-213ENST00000548598 NEXMIFQ5QGS0 1516 aa25.52■■□□□ 1.68
RACGAP1-213ENST00000548598 NUTM2DQ5VT03 806 aaPredicted RBP25.49■■□□□ 1.67
RACGAP1-213ENST00000548598 PROSER2Q86WR7 435 aaPredicted RBP25.49■■□□□ 1.67
RACGAP1-213ENST00000548598 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
RACGAP1-213ENST00000548598 FAM135BQ49AJ0 1406 aa25.48■■□□□ 1.67
RACGAP1-213ENST00000548598 NCOA3Q9Y6Q9 1424 aa25.47■■□□□ 1.67
RACGAP1-213ENST00000548598 SENP3Q9H4L4 574 aaPredicted RBP25.47■■□□□ 1.67
RACGAP1-213ENST00000548598 XRN1Q8IZH2 1706 aaKnown RBP25.46■■□□□ 1.67
RACGAP1-213ENST00000548598 TRIM52Q96A61 297 aa25.45■■□□□ 1.66
RACGAP1-213ENST00000548598 RBM33Q96EV2 1170 aaKnown RBP25.44■■□□□ 1.66
RACGAP1-213ENST00000548598 ROBO1Q9Y6N7 1651 aa25.44■■□□□ 1.66
RACGAP1-213ENST00000548598 PTPRUQ92729 1446 aa25.44■■□□□ 1.66
RACGAP1-213ENST00000548598 MSH6P52701 1360 aa25.44■■□□□ 1.66
RACGAP1-213ENST00000548598 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
RACGAP1-213ENST00000548598 ZNF326Q5BKZ1 582 aaKnown RBP25.41■■□□□ 1.66
RACGAP1-213ENST00000548598 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
RACGAP1-213ENST00000548598 SETD1AO15047 1707 aaKnown RBP25.38■■□□□ 1.65
RACGAP1-213ENST00000548598 PPLO60437 1756 aa25.37■■□□□ 1.65
RACGAP1-213ENST00000548598 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.37■■□□□ 1.65
RACGAP1-213ENST00000548598 METP08581 1390 aa25.34■■□□□ 1.65
RACGAP1-213ENST00000548598 AMOTL2Q9Y2J4 779 aa25.34■■□□□ 1.65
RACGAP1-213ENST00000548598 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
RACGAP1-213ENST00000548598 DCCP43146 1447 aa25.3■■□□□ 1.64
RACGAP1-213ENST00000548598 SETD5Q9C0A6 1442 aa25.3■■□□□ 1.64
RACGAP1-213ENST00000548598 SLAIN2Q9P270 581 aa25.3■■□□□ 1.64
RACGAP1-213ENST00000548598 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
RACGAP1-213ENST00000548598 CCDC144AA2RUR9 1427 aa25.29■■□□□ 1.64
RACGAP1-213ENST00000548598 FOXD1Q16676 465 aa25.29■■□□□ 1.64
RACGAP1-213ENST00000548598 MPHOSPH9Q99550 1183 aa25.29■■□□□ 1.64
RACGAP1-213ENST00000548598 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
RACGAP1-213ENST00000548598 PRAG1Q86YV5 1406 aa25.29■■□□□ 1.64
RACGAP1-213ENST00000548598 C19orf44Q9H6X5 657 aa25.28■■□□□ 1.64
RACGAP1-213ENST00000548598 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
RACGAP1-213ENST00000548598 PHLPP1O60346 1717 aa25.27■■□□□ 1.64
RACGAP1-213ENST00000548598 VGFO15240 615 aaPredicted RBP25.26■■□□□ 1.63
RACGAP1-213ENST00000548598 CADPS2Q86UW7 1296 aa25.26■■□□□ 1.63
RACGAP1-213ENST00000548598 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
RACGAP1-213ENST00000548598 COL16A1Q07092 1604 aaPredicted RBP25.25■■□□□ 1.63
RACGAP1-213ENST00000548598 NALCNQ8IZF0 1738 aa25.24■■□□□ 1.63
RACGAP1-213ENST00000548598 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
RACGAP1-213ENST00000548598 C14orf37Q86TY3 774 aa25.23■■□□□ 1.63
RACGAP1-213ENST00000548598 ADGRL3Q9HAR2 1447 aa25.22■■□□□ 1.63
RACGAP1-213ENST00000548598 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
RACGAP1-213ENST00000548598 SOCS7O14512 581 aa25.22■■□□□ 1.63
RACGAP1-213ENST00000548598 ATF3P18847 181 aa25.2■■□□□ 1.62
RACGAP1-213ENST00000548598 MST1RQ04912 1400 aa25.18■■□□□ 1.62
RACGAP1-213ENST00000548598 ANKRD30BQ9BXX2 1392 aa25.17■■□□□ 1.62
RACGAP1-213ENST00000548598 ASXL1Q8IXJ9 1541 aa25.15■■□□□ 1.62
RACGAP1-213ENST00000548598 ROBO2Q9HCK4 1378 aa25.15■■□□□ 1.62
RACGAP1-213ENST00000548598 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.62
RACGAP1-213ENST00000548598 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
RACGAP1-213ENST00000548598 JCADQ9P266 1359 aa25.14■■□□□ 1.61
RACGAP1-213ENST00000548598 PIK3C2GO75747 1445 aa25.13■■□□□ 1.61
RACGAP1-213ENST00000548598 ADGRF5Q8IZF2 1346 aa25.12■■□□□ 1.61
RACGAP1-213ENST00000548598 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
RACGAP1-213ENST00000548598 SHPRHQ149N8 1683 aa25.12■■□□□ 1.61
RACGAP1-213ENST00000548598 KNDC1Q76NI1 1749 aa25.1■■□□□ 1.61
RACGAP1-213ENST00000548598 TECPR2O15040 1411 aa25.1■■□□□ 1.61
RACGAP1-213ENST00000548598 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
RACGAP1-213ENST00000548598 RGL3Q3MIN7 710 aa25.09■■□□□ 1.61
RACGAP1-213ENST00000548598 MYOM2P54296 1465 aa25.09■■□□□ 1.61
RACGAP1-213ENST00000548598 RGS17Q9UGC6 210 aaPredicted RBP25.08■■□□□ 1.61
RACGAP1-213ENST00000548598 LAMC1P11047 1609 aa25.06■■□□□ 1.6
RACGAP1-213ENST00000548598 CDC42BPGQ6DT37 1551 aa25.05■■□□□ 1.6
RACGAP1-213ENST00000548598 C1orf167Q5SNV9 1468 aa25.05■■□□□ 1.6
RACGAP1-213ENST00000548598 HRCP23327 699 aa25.05■■□□□ 1.6
RACGAP1-213ENST00000548598 LRP6O75581 1613 aa25.03■■□□□ 1.6
RACGAP1-213ENST00000548598 LRPPRCP42704 1394 aaKnown RBP25.03■■□□□ 1.6
RACGAP1-213ENST00000548598 SPATA31A6Q5VVP1 1343 aa25.02■■□□□ 1.6
RACGAP1-213ENST00000548598 ABCC11Q96J66 1382 aa25■■□□□ 1.59
RACGAP1-213ENST00000548598 YTHDC2Q9H6S0 1430 aaKnown RBP24.97■■□□□ 1.59
RACGAP1-213ENST00000548598 C14orf93Q9H972 538 aaKnown RBP24.94■■□□□ 1.58
RACGAP1-213ENST00000548598 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
RACGAP1-213ENST00000548598 PLEKHH1Q9ULM0 1364 aa24.92■■□□□ 1.58
RACGAP1-213ENST00000548598 POTEAQ6S8J7 498 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms