RNA–Protein interactions for RNA: ENST00000548496.1

KRT18-205, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-205ENST00000548496 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
KRT18-205ENST00000548496 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
KRT18-205ENST00000548496 SLIT1O75093 1534 aa17.72■□□□□ 0.43
KRT18-205ENST00000548496 NEURL4Q96JN8 1562 aa17.71■□□□□ 0.43
KRT18-205ENST00000548496 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
KRT18-205ENST00000548496 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
KRT18-205ENST00000548496 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
KRT18-205ENST00000548496 NPHP4O75161 1426 aaPredicted RBP17.69■□□□□ 0.42
KRT18-205ENST00000548496 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
KRT18-205ENST00000548496 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
KRT18-205ENST00000548496 DMRT2Q9Y5R5 561 aa17.68■□□□□ 0.42
KRT18-205ENST00000548496 SPATA31E1Q6ZUB1 1445 aa17.66■□□□□ 0.42
KRT18-205ENST00000548496 HDGFP51858 240 aaKnown RBP17.66■□□□□ 0.42
KRT18-205ENST00000548496 IQGAP1P46940 1657 aa17.65■□□□□ 0.42
KRT18-205ENST00000548496 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.42
KRT18-205ENST00000548496 NEXMIFQ5QGS0 1516 aa17.64■□□□□ 0.41
KRT18-205ENST00000548496 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
KRT18-205ENST00000548496 MED14O60244 1454 aa17.63■□□□□ 0.41
KRT18-205ENST00000548496 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
KRT18-205ENST00000548496 PPLO60437 1756 aa17.63■□□□□ 0.41
KRT18-205ENST00000548496 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
KRT18-205ENST00000548496 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
KRT18-205ENST00000548496 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
KRT18-205ENST00000548496 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
KRT18-205ENST00000548496 VGFO15240 615 aaPredicted RBP17.59■□□□□ 0.41
KRT18-205ENST00000548496 IFT172Q9UG01 1749 aa17.58■□□□□ 0.4
KRT18-205ENST00000548496 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
KRT18-205ENST00000548496 ADAMTS13Q76LX8 1427 aa17.56■□□□□ 0.4
KRT18-205ENST00000548496 STRCP1A6NGW2 1772 aa17.55■□□□□ 0.4
KRT18-205ENST00000548496 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
KRT18-205ENST00000548496 L3MBTL2Q969R5 705 aa17.54■□□□□ 0.4
KRT18-205ENST00000548496 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
KRT18-205ENST00000548496 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
KRT18-205ENST00000548496 CFAP70Q5T0N1 1121 aa17.51■□□□□ 0.39
KRT18-205ENST00000548496 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
KRT18-205ENST00000548496 METP08581 1390 aa17.51■□□□□ 0.39
KRT18-205ENST00000548496 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
KRT18-205ENST00000548496 SETBP1Q9Y6X0 1596 aa17.5■□□□□ 0.39
KRT18-205ENST00000548496 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
KRT18-205ENST00000548496 KCNA6P17658 529 aa17.49■□□□□ 0.39
KRT18-205ENST00000548496 CHD2O14647 1828 aaKnown RBP17.49■□□□□ 0.39
KRT18-205ENST00000548496 PTPRUQ92729 1446 aa17.48■□□□□ 0.39
KRT18-205ENST00000548496 AMOTL2Q9Y2J4 779 aa17.48■□□□□ 0.39
KRT18-205ENST00000548496 CERKQ8TCT0 537 aa17.47■□□□□ 0.39
KRT18-205ENST00000548496 STK26Q9P289 416 aa17.47■□□□□ 0.39
KRT18-205ENST00000548496 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
KRT18-205ENST00000548496 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
KRT18-205ENST00000548496 MYOM2P54296 1465 aa17.46■□□□□ 0.39
KRT18-205ENST00000548496 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
KRT18-205ENST00000548496 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
KRT18-205ENST00000548496 C14orf93Q9H972 538 aaKnown RBP17.45■□□□□ 0.38
KRT18-205ENST00000548496 DIP2AQ14689 1571 aa17.45■□□□□ 0.38
KRT18-205ENST00000548496 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
KRT18-205ENST00000548496 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
KRT18-205ENST00000548496 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
KRT18-205ENST00000548496 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
KRT18-205ENST00000548496 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
KRT18-205ENST00000548496 XIRP1Q702N8 1843 aaKnown RBP17.4■□□□□ 0.38
KRT18-205ENST00000548496 CPS1P31327 1500 aa17.4■□□□□ 0.38
KRT18-205ENST00000548496 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
KRT18-205ENST00000548496 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
KRT18-205ENST00000548496 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
KRT18-205ENST00000548496 PRAG1Q86YV5 1406 aa17.39■□□□□ 0.38
KRT18-205ENST00000548496 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
KRT18-205ENST00000548496 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
KRT18-205ENST00000548496 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
KRT18-205ENST00000548496 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
KRT18-205ENST00000548496 WAPLQ7Z5K2 1190 aa17.37■□□□□ 0.37
KRT18-205ENST00000548496 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
KRT18-205ENST00000548496 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
KRT18-205ENST00000548496 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
KRT18-205ENST00000548496 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
KRT18-205ENST00000548496 LRPPRCP42704 1394 aaKnown RBP17.35■□□□□ 0.37
KRT18-205ENST00000548496 LAMC1P11047 1609 aa17.34■□□□□ 0.37
KRT18-205ENST00000548496 NKTRP30414 1462 aaKnown RBP17.34■□□□□ 0.37
KRT18-205ENST00000548496 PLEKHH1Q9ULM0 1364 aa17.34■□□□□ 0.37
KRT18-205ENST00000548496 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.36
KRT18-205ENST00000548496 ADGRB1O14514 1584 aa17.32■□□□□ 0.36
KRT18-205ENST00000548496 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
KRT18-205ENST00000548496 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
KRT18-205ENST00000548496 KIAA1210Q9ULL0 1709 aa17.3■□□□□ 0.36
KRT18-205ENST00000548496 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
KRT18-205ENST00000548496 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
KRT18-205ENST00000548496 PIP4K2BP78356 416 aa17.29■□□□□ 0.36
KRT18-205ENST00000548496 POGKQ9P215 609 aa17.29■□□□□ 0.36
KRT18-205ENST00000548496 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
KRT18-205ENST00000548496 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.36
KRT18-205ENST00000548496 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
KRT18-205ENST00000548496 MSH6P52701 1360 aa17.27■□□□□ 0.35
KRT18-205ENST00000548496 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
KRT18-205ENST00000548496 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
KRT18-205ENST00000548496 NALCNQ8IZF0 1738 aa17.26■□□□□ 0.35
KRT18-205ENST00000548496 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
KRT18-205ENST00000548496 TECPR2O15040 1411 aa17.25■□□□□ 0.35
KRT18-205ENST00000548496 NUTM2FA1L443 756 aa17.25■□□□□ 0.35
KRT18-205ENST00000548496 TOM1O60784 492 aa17.25■□□□□ 0.35
KRT18-205ENST00000548496 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
KRT18-205ENST00000548496 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
KRT18-205ENST00000548496 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
KRT18-205ENST00000548496 ATF3P18847 181 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms