RNA–Protein interactions for RNA: ENST00000548364.5

C12orf54-203, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf54, Length 685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-203ENST00000548364 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
C12orf54-203ENST00000548364 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
C12orf54-203ENST00000548364 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
C12orf54-203ENST00000548364 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
C12orf54-203ENST00000548364 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
C12orf54-203ENST00000548364 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
C12orf54-203ENST00000548364 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
C12orf54-203ENST00000548364 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.34
C12orf54-203ENST00000548364 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
C12orf54-203ENST00000548364 LTKP29376 864 aa17.2■□□□□ 0.34
C12orf54-203ENST00000548364 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
C12orf54-203ENST00000548364 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
C12orf54-203ENST00000548364 SETBP1Q9Y6X0 1596 aa17.17■□□□□ 0.34
C12orf54-203ENST00000548364 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
C12orf54-203ENST00000548364 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
C12orf54-203ENST00000548364 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
C12orf54-203ENST00000548364 PIK3R4Q99570 1358 aa17.15■□□□□ 0.34
C12orf54-203ENST00000548364 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.34
C12orf54-203ENST00000548364 BCANQ96GW7 911 aa17.13■□□□□ 0.33
C12orf54-203ENST00000548364 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
C12orf54-203ENST00000548364 PPLO60437 1756 aa17.12■□□□□ 0.33
C12orf54-203ENST00000548364 TOM1O60784 492 aa17.11■□□□□ 0.33
C12orf54-203ENST00000548364 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
C12orf54-203ENST00000548364 XIRP1Q702N8 1843 aaKnown RBP17.11■□□□□ 0.33
C12orf54-203ENST00000548364 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
C12orf54-203ENST00000548364 UBAP1LF5GYI3 381 aa17.1■□□□□ 0.33
C12orf54-203ENST00000548364 KCNA6P17658 529 aa17.09■□□□□ 0.33
C12orf54-203ENST00000548364 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
C12orf54-203ENST00000548364 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
C12orf54-203ENST00000548364 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
C12orf54-203ENST00000548364 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
C12orf54-203ENST00000548364 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
C12orf54-203ENST00000548364 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
C12orf54-203ENST00000548364 XRN1Q8IZH2 1706 aaKnown RBP17.07■□□□□ 0.32
C12orf54-203ENST00000548364 HRCP23327 699 aa17.06■□□□□ 0.32
C12orf54-203ENST00000548364 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
C12orf54-203ENST00000548364 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
C12orf54-203ENST00000548364 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
C12orf54-203ENST00000548364 LAMC1P11047 1609 aa17.03■□□□□ 0.32
C12orf54-203ENST00000548364 MSH6P52701 1360 aa17.02■□□□□ 0.32
C12orf54-203ENST00000548364 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
C12orf54-203ENST00000548364 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
C12orf54-203ENST00000548364 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.31
C12orf54-203ENST00000548364 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
C12orf54-203ENST00000548364 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
C12orf54-203ENST00000548364 DCCP43146 1447 aa16.99■□□□□ 0.31
C12orf54-203ENST00000548364 PRAG1Q86YV5 1406 aa16.99■□□□□ 0.31
C12orf54-203ENST00000548364 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
C12orf54-203ENST00000548364 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
C12orf54-203ENST00000548364 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
C12orf54-203ENST00000548364 MYOM2P54296 1465 aa16.98■□□□□ 0.31
C12orf54-203ENST00000548364 FOXD1Q16676 465 aa16.96■□□□□ 0.31
C12orf54-203ENST00000548364 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
C12orf54-203ENST00000548364 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
C12orf54-203ENST00000548364 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
C12orf54-203ENST00000548364 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.94■□□□□ 0.3
C12orf54-203ENST00000548364 PIK3C2GO75747 1445 aa16.94■□□□□ 0.3
C12orf54-203ENST00000548364 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
C12orf54-203ENST00000548364 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
C12orf54-203ENST00000548364 C14orf37Q86TY3 774 aa16.92■□□□□ 0.3
C12orf54-203ENST00000548364 METP08581 1390 aa16.91■□□□□ 0.3
C12orf54-203ENST00000548364 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
C12orf54-203ENST00000548364 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
C12orf54-203ENST00000548364 NRXN1Q9ULB1 1477 aa16.91■□□□□ 0.3
C12orf54-203ENST00000548364 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
C12orf54-203ENST00000548364 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
C12orf54-203ENST00000548364 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
C12orf54-203ENST00000548364 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
C12orf54-203ENST00000548364 TECPR2O15040 1411 aa16.87■□□□□ 0.29
C12orf54-203ENST00000548364 ATF3P18847 181 aa16.87■□□□□ 0.29
C12orf54-203ENST00000548364 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
C12orf54-203ENST00000548364 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
C12orf54-203ENST00000548364 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
C12orf54-203ENST00000548364 HSPA1LP34931 641 aa16.85■□□□□ 0.29
C12orf54-203ENST00000548364 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
C12orf54-203ENST00000548364 ASXL1Q8IXJ9 1541 aa16.84■□□□□ 0.29
C12orf54-203ENST00000548364 MED1Q15648 1581 aaPredicted RBP16.84■□□□□ 0.29
C12orf54-203ENST00000548364 ADGRF5Q8IZF2 1346 aa16.83■□□□□ 0.28
C12orf54-203ENST00000548364 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
C12orf54-203ENST00000548364 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
C12orf54-203ENST00000548364 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
C12orf54-203ENST00000548364 RBM33Q96EV2 1170 aaKnown RBP16.8■□□□□ 0.28
C12orf54-203ENST00000548364 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
C12orf54-203ENST00000548364 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
C12orf54-203ENST00000548364 MST1RQ04912 1400 aa16.79■□□□□ 0.28
C12orf54-203ENST00000548364 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
C12orf54-203ENST00000548364 ABCC11Q96J66 1382 aa16.79■□□□□ 0.28
C12orf54-203ENST00000548364 ROBO2Q9HCK4 1378 aa16.79■□□□□ 0.28
C12orf54-203ENST00000548364 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
C12orf54-203ENST00000548364 DHX57Q6P158 1386 aaKnown RBP16.78■□□□□ 0.28
C12orf54-203ENST00000548364 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
C12orf54-203ENST00000548364 SHPRHQ149N8 1683 aa16.77■□□□□ 0.28
C12orf54-203ENST00000548364 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
C12orf54-203ENST00000548364 ADGRB1O14514 1584 aa16.76■□□□□ 0.27
C12orf54-203ENST00000548364 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
C12orf54-203ENST00000548364 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
C12orf54-203ENST00000548364 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
C12orf54-203ENST00000548364 JCADQ9P266 1359 aa16.74■□□□□ 0.27
C12orf54-203ENST00000548364 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
C12orf54-203ENST00000548364 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms