RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 CHGAP10645 457 aaKnown RBP22.68■■□□□ 1.22
RNF41-205ENST00000548225 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
RNF41-205ENST00000548225 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
RNF41-205ENST00000548225 PLEKHG1Q9ULL1 1385 aa22.64■■□□□ 1.22
RNF41-205ENST00000548225 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
RNF41-205ENST00000548225 KIF1BO60333 1816 aa22.63■■□□□ 1.21
RNF41-205ENST00000548225 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
RNF41-205ENST00000548225 STRCP1A6NGW2 1772 aa22.62■■□□□ 1.21
RNF41-205ENST00000548225 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
RNF41-205ENST00000548225 DIP2AQ14689 1571 aa22.58■■□□□ 1.2
RNF41-205ENST00000548225 BCANQ96GW7 911 aa22.57■■□□□ 1.2
RNF41-205ENST00000548225 HRCP23327 699 aa22.56■■□□□ 1.2
RNF41-205ENST00000548225 SLC26A8Q96RN1 970 aa22.56■■□□□ 1.2
RNF41-205ENST00000548225 LRRC7Q96NW7 1537 aa22.56■■□□□ 1.2
RNF41-205ENST00000548225 NWD1Q149M9 1564 aa22.55■■□□□ 1.2
RNF41-205ENST00000548225 ZNF326Q5BKZ1 582 aaKnown RBP22.55■■□□□ 1.2
RNF41-205ENST00000548225 NEXMIFQ5QGS0 1516 aa22.54■■□□□ 1.2
RNF41-205ENST00000548225 CCDC144AA2RUR9 1427 aa22.54■■□□□ 1.2
RNF41-205ENST00000548225 KCNA6P17658 529 aa22.53■■□□□ 1.2
RNF41-205ENST00000548225 TBX22Q9Y458 520 aa22.53■■□□□ 1.2
RNF41-205ENST00000548225 NKTRP30414 1462 aaKnown RBP22.53■■□□□ 1.2
RNF41-205ENST00000548225 SETBP1Q9Y6X0 1596 aa22.52■■□□□ 1.2
RNF41-205ENST00000548225 ADAMTS13Q76LX8 1427 aa22.52■■□□□ 1.2
RNF41-205ENST00000548225 FOXD1Q16676 465 aa22.52■■□□□ 1.2
RNF41-205ENST00000548225 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
RNF41-205ENST00000548225 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
RNF41-205ENST00000548225 UBAP1LF5GYI3 381 aa22.5■■□□□ 1.19
RNF41-205ENST00000548225 CHD2O14647 1828 aaKnown RBP22.5■■□□□ 1.19
RNF41-205ENST00000548225 RPGRIP1LQ68CZ1 1315 aa22.49■■□□□ 1.19
RNF41-205ENST00000548225 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
RNF41-205ENST00000548225 TOM1O60784 492 aa22.47■■□□□ 1.19
RNF41-205ENST00000548225 XIRP1Q702N8 1843 aaKnown RBP22.46■■□□□ 1.19
RNF41-205ENST00000548225 PPLO60437 1756 aa22.45■■□□□ 1.19
RNF41-205ENST00000548225 VGFO15240 615 aaPredicted RBP22.44■■□□□ 1.18
RNF41-205ENST00000548225 SPATA31E1Q6ZUB1 1445 aa22.44■■□□□ 1.18
RNF41-205ENST00000548225 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
RNF41-205ENST00000548225 TMEM94Q12767 1356 aa22.42■■□□□ 1.18
RNF41-205ENST00000548225 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
RNF41-205ENST00000548225 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
RNF41-205ENST00000548225 IFT172Q9UG01 1749 aa22.39■■□□□ 1.17
RNF41-205ENST00000548225 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.17
RNF41-205ENST00000548225 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
RNF41-205ENST00000548225 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
RNF41-205ENST00000548225 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
RNF41-205ENST00000548225 PTPRUQ92729 1446 aa22.35■■□□□ 1.17
RNF41-205ENST00000548225 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
RNF41-205ENST00000548225 AMOTL2Q9Y2J4 779 aa22.34■■□□□ 1.17
RNF41-205ENST00000548225 METP08581 1390 aa22.34■■□□□ 1.17
RNF41-205ENST00000548225 MSH6P52701 1360 aa22.34■■□□□ 1.17
RNF41-205ENST00000548225 PIP4K2BP78356 416 aa22.33■■□□□ 1.17
RNF41-205ENST00000548225 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
RNF41-205ENST00000548225 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
RNF41-205ENST00000548225 PRAG1Q86YV5 1406 aa22.29■■□□□ 1.16
RNF41-205ENST00000548225 MYOM2P54296 1465 aa22.28■■□□□ 1.16
RNF41-205ENST00000548225 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
RNF41-205ENST00000548225 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
RNF41-205ENST00000548225 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
RNF41-205ENST00000548225 NRXN1Q9ULB1 1477 aa22.25■■□□□ 1.15
RNF41-205ENST00000548225 FAM135BQ49AJ0 1406 aa22.24■■□□□ 1.15
RNF41-205ENST00000548225 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.24■■□□□ 1.15
RNF41-205ENST00000548225 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
RNF41-205ENST00000548225 C19orf44Q9H6X5 657 aa22.24■■□□□ 1.15
RNF41-205ENST00000548225 LAMC1P11047 1609 aa22.24■■□□□ 1.15
RNF41-205ENST00000548225 DCCP43146 1447 aa22.23■■□□□ 1.15
RNF41-205ENST00000548225 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
RNF41-205ENST00000548225 HSPA1LP34931 641 aa22.21■■□□□ 1.15
RNF41-205ENST00000548225 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
RNF41-205ENST00000548225 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
RNF41-205ENST00000548225 ROBO1Q9Y6N7 1651 aa22.2■■□□□ 1.14
RNF41-205ENST00000548225 ADGRL3Q9HAR2 1447 aa22.19■■□□□ 1.14
RNF41-205ENST00000548225 ATF3P18847 181 aa22.18■■□□□ 1.14
RNF41-205ENST00000548225 SLAIN2Q9P270 581 aa22.18■■□□□ 1.14
RNF41-205ENST00000548225 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
RNF41-205ENST00000548225 ASXL1Q8IXJ9 1541 aa22.17■■□□□ 1.14
RNF41-205ENST00000548225 TECPR2O15040 1411 aa22.17■■□□□ 1.14
RNF41-205ENST00000548225 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
RNF41-205ENST00000548225 ROBO2Q9HCK4 1378 aa22.16■■□□□ 1.14
RNF41-205ENST00000548225 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
RNF41-205ENST00000548225 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
RNF41-205ENST00000548225 ABCC11Q96J66 1382 aa22.13■■□□□ 1.13
RNF41-205ENST00000548225 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
RNF41-205ENST00000548225 YTHDC2Q9H6S0 1430 aaKnown RBP22.12■■□□□ 1.13
RNF41-205ENST00000548225 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
RNF41-205ENST00000548225 MST1RQ04912 1400 aa22.09■■□□□ 1.13
RNF41-205ENST00000548225 CFAP70Q5T0N1 1121 aa22.09■■□□□ 1.13
RNF41-205ENST00000548225 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
RNF41-205ENST00000548225 SIRT1Q96EB6 747 aa22.07■■□□□ 1.12
RNF41-205ENST00000548225 STK26Q9P289 416 aa22.07■■□□□ 1.12
RNF41-205ENST00000548225 KDM2AQ9Y2K7 1162 aa22.07■■□□□ 1.12
RNF41-205ENST00000548225 ADGRB1O14514 1584 aa22.07■■□□□ 1.12
RNF41-205ENST00000548225 CDC42BPGQ6DT37 1551 aa22.07■■□□□ 1.12
RNF41-205ENST00000548225 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
RNF41-205ENST00000548225 AHDC1Q5TGY3 1603 aaPredicted RBP22.06■■□□□ 1.12
RNF41-205ENST00000548225 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
RNF41-205ENST00000548225 BRINP3Q76B58 766 aa22.02■■□□□ 1.12
RNF41-205ENST00000548225 MED1Q15648 1581 aaPredicted RBP22.02■■□□□ 1.12
RNF41-205ENST00000548225 KIAA1210Q9ULL0 1709 aa22.02■■□□□ 1.12
RNF41-205ENST00000548225 COL16A1Q07092 1604 aaPredicted RBP22.01■■□□□ 1.11
RNF41-205ENST00000548225 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
RNF41-205ENST00000548225 DISP3Q9P2K9 1392 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms