RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
GCN1-204ENST00000548132 SLC52A1Q9NWF4 448 aa19.15■□□□□ 0.66
GCN1-204ENST00000548132 XRN1Q8IZH2 1706 aaKnown RBP19.14■□□□□ 0.66
GCN1-204ENST00000548132 NUP155O75694 1391 aa19.14■□□□□ 0.65
GCN1-204ENST00000548132 PLEKHG1Q9ULL1 1385 aa19.14■□□□□ 0.65
GCN1-204ENST00000548132 ADAMTS13Q76LX8 1427 aa19.14■□□□□ 0.65
GCN1-204ENST00000548132 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
GCN1-204ENST00000548132 ITGAEP38570 1179 aa19.13■□□□□ 0.65
GCN1-204ENST00000548132 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
GCN1-204ENST00000548132 ROBO1Q9Y6N7 1651 aa19.12■□□□□ 0.65
GCN1-204ENST00000548132 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
GCN1-204ENST00000548132 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
GCN1-204ENST00000548132 DISP3Q9P2K9 1392 aa19.11■□□□□ 0.65
GCN1-204ENST00000548132 EID1Q9Y6B2 187 aa19.11■□□□□ 0.65
GCN1-204ENST00000548132 KIF1BO60333 1816 aa19.11■□□□□ 0.65
GCN1-204ENST00000548132 HSPA1LP34931 641 aa19.09■□□□□ 0.65
GCN1-204ENST00000548132 TMEM94Q12767 1356 aa19.08■□□□□ 0.65
GCN1-204ENST00000548132 STAG3Q9UJ98 1225 aa19.08■□□□□ 0.64
GCN1-204ENST00000548132 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
GCN1-204ENST00000548132 PIP4K2BP78356 416 aa19.06■□□□□ 0.64
GCN1-204ENST00000548132 ILDR2Q71H61 639 aa19.06■□□□□ 0.64
GCN1-204ENST00000548132 TOM1O60784 492 aa19.05■□□□□ 0.64
GCN1-204ENST00000548132 PPLO60437 1756 aa19.05■□□□□ 0.64
GCN1-204ENST00000548132 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.04■□□□□ 0.64
GCN1-204ENST00000548132 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
GCN1-204ENST00000548132 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
GCN1-204ENST00000548132 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
GCN1-204ENST00000548132 KCNA6P17658 529 aa19.02■□□□□ 0.64
GCN1-204ENST00000548132 NALCNQ8IZF0 1738 aa19.02■□□□□ 0.63
GCN1-204ENST00000548132 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
GCN1-204ENST00000548132 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
GCN1-204ENST00000548132 PHLPP1O60346 1717 aa18.97■□□□□ 0.63
GCN1-204ENST00000548132 FAM135BQ49AJ0 1406 aa18.97■□□□□ 0.63
GCN1-204ENST00000548132 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
GCN1-204ENST00000548132 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
GCN1-204ENST00000548132 RBM33Q96EV2 1170 aaKnown RBP18.96■□□□□ 0.63
GCN1-204ENST00000548132 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
GCN1-204ENST00000548132 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
GCN1-204ENST00000548132 AHDC1Q5TGY3 1603 aaPredicted RBP18.93■□□□□ 0.62
GCN1-204ENST00000548132 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
GCN1-204ENST00000548132 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
GCN1-204ENST00000548132 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
GCN1-204ENST00000548132 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
GCN1-204ENST00000548132 MSH6P52701 1360 aa18.91■□□□□ 0.62
GCN1-204ENST00000548132 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
GCN1-204ENST00000548132 PRAG1Q86YV5 1406 aa18.9■□□□□ 0.62
GCN1-204ENST00000548132 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
GCN1-204ENST00000548132 METP08581 1390 aa18.89■□□□□ 0.61
GCN1-204ENST00000548132 SHPRHQ149N8 1683 aa18.89■□□□□ 0.61
GCN1-204ENST00000548132 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
GCN1-204ENST00000548132 DCCP43146 1447 aa18.86■□□□□ 0.61
GCN1-204ENST00000548132 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
GCN1-204ENST00000548132 BCANQ96GW7 911 aa18.85■□□□□ 0.61
GCN1-204ENST00000548132 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
GCN1-204ENST00000548132 LAMC1P11047 1609 aa18.84■□□□□ 0.61
GCN1-204ENST00000548132 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.61
GCN1-204ENST00000548132 HDGFP51858 240 aaKnown RBP18.83■□□□□ 0.6
GCN1-204ENST00000548132 MST1RQ04912 1400 aa18.83■□□□□ 0.6
GCN1-204ENST00000548132 LRP6O75581 1613 aa18.82■□□□□ 0.6
GCN1-204ENST00000548132 SOCS7O14512 581 aa18.81■□□□□ 0.6
GCN1-204ENST00000548132 FOXD1Q16676 465 aa18.79■□□□□ 0.6
GCN1-204ENST00000548132 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
GCN1-204ENST00000548132 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
GCN1-204ENST00000548132 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
GCN1-204ENST00000548132 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
GCN1-204ENST00000548132 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
GCN1-204ENST00000548132 CCDC144AA2RUR9 1427 aa18.77■□□□□ 0.6
GCN1-204ENST00000548132 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
GCN1-204ENST00000548132 SETD5Q9C0A6 1442 aa18.75■□□□□ 0.59
GCN1-204ENST00000548132 RGS17Q9UGC6 210 aaPredicted RBP18.75■□□□□ 0.59
GCN1-204ENST00000548132 ROBO2Q9HCK4 1378 aa18.75■□□□□ 0.59
GCN1-204ENST00000548132 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
GCN1-204ENST00000548132 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
GCN1-204ENST00000548132 RAB3GAP2Q9H2M9 1393 aa18.73■□□□□ 0.59
GCN1-204ENST00000548132 TECPR2O15040 1411 aa18.73■□□□□ 0.59
GCN1-204ENST00000548132 MYOM2P54296 1465 aa18.72■□□□□ 0.59
GCN1-204ENST00000548132 JCADQ9P266 1359 aa18.71■□□□□ 0.59
GCN1-204ENST00000548132 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
GCN1-204ENST00000548132 FMN2Q9NZ56 1722 aa18.71■□□□□ 0.59
GCN1-204ENST00000548132 CADPS2Q86UW7 1296 aa18.7■□□□□ 0.58
GCN1-204ENST00000548132 RPGRIP1LQ68CZ1 1315 aa18.7■□□□□ 0.58
GCN1-204ENST00000548132 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
GCN1-204ENST00000548132 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
GCN1-204ENST00000548132 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
GCN1-204ENST00000548132 C14orf37Q86TY3 774 aa18.68■□□□□ 0.58
GCN1-204ENST00000548132 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
GCN1-204ENST00000548132 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
GCN1-204ENST00000548132 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
GCN1-204ENST00000548132 ATF3P18847 181 aa18.65■□□□□ 0.58
GCN1-204ENST00000548132 ANKRD30BQ9BXX2 1392 aa18.65■□□□□ 0.58
GCN1-204ENST00000548132 ADGRB1O14514 1584 aa18.64■□□□□ 0.58
GCN1-204ENST00000548132 VGFO15240 615 aaPredicted RBP18.64■□□□□ 0.57
GCN1-204ENST00000548132 RGPD8O14715 1765 aaPredicted RBP18.63■□□□□ 0.57
GCN1-204ENST00000548132 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
GCN1-204ENST00000548132 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
GCN1-204ENST00000548132 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
GCN1-204ENST00000548132 ADGRB2O60241 1585 aa18.6■□□□□ 0.57
GCN1-204ENST00000548132 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
GCN1-204ENST00000548132 POTEAQ6S8J7 498 aa18.6■□□□□ 0.57
GCN1-204ENST00000548132 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms