RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 KIF21BO75037 1637 aa8.02□□□□□ -1.13
AC078880.2-201ENST00000547948 URB2Q14146 1524 aaKnown RBP8.02□□□□□ -1.13
AC078880.2-201ENST00000547948 POLA1P09884 1462 aaPredicted RBP8.01□□□□□ -1.13
AC078880.2-201ENST00000547948 LCE2BO14633 110 aa8.01□□□□□ -1.13
AC078880.2-201ENST00000547948 WDR62O43379 1518 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 ABCA10Q8WWZ4 1543 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 EN1Q05925 392 aaPredicted RBP8□□□□□ -1.13
AC078880.2-201ENST00000547948 PPP1R18Q6NYC8 613 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 CDCA7LQ96GN5 454 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 MTRQ99707 1265 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 CUX2O14529 1486 aa8□□□□□ -1.13
AC078880.2-201ENST00000547948 ERICH3Q5RHP9 1530 aa7.99□□□□□ -1.13
AC078880.2-201ENST00000547948 NRG2O14511 850 aaPredicted RBP7.99□□□□□ -1.13
AC078880.2-201ENST00000547948 HDGFP51858 240 aaKnown RBP7.99□□□□□ -1.13
AC078880.2-201ENST00000547948 IL21Q9HBE4 155 aa7.99□□□□□ -1.13
AC078880.2-201ENST00000547948 PRSS12P56730 875 aa7.98□□□□□ -1.13
AC078880.2-201ENST00000547948 ZNF516Q92618 1163 aa7.98□□□□□ -1.13
AC078880.2-201ENST00000547948 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
AC078880.2-201ENST00000547948 RNF40O75150 1001 aa7.97□□□□□ -1.13
AC078880.2-201ENST00000547948 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.97□□□□□ -1.13
AC078880.2-201ENST00000547948 PNMA3Q9UL41 463 aa7.97□□□□□ -1.13
AC078880.2-201ENST00000547948 V9GY48 417 aaPredicted RBP7.97□□□□□ -1.13
AC078880.2-201ENST00000547948 IFT140Q96RY7 1462 aa7.96□□□□□ -1.13
AC078880.2-201ENST00000547948 ZNF787Q6DD87 383 aa7.96□□□□□ -1.14
AC078880.2-201ENST00000547948 TATDN2Q93075 761 aa7.96□□□□□ -1.14
AC078880.2-201ENST00000547948 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
AC078880.2-201ENST00000547948 RUSC2Q8N2Y8 1516 aa7.95□□□□□ -1.14
AC078880.2-201ENST00000547948 PDZRN3Q9UPQ7 1066 aa7.95□□□□□ -1.14
AC078880.2-201ENST00000547948 THOC2Q8NI27 1593 aaKnown RBP7.95□□□□□ -1.14
AC078880.2-201ENST00000547948 CUL7Q14999 1698 aa7.95□□□□□ -1.14
AC078880.2-201ENST00000547948 TNIKQ9UKE5 1360 aa7.95□□□□□ -1.14
AC078880.2-201ENST00000547948 PRXQ9BXM0 1461 aa7.94□□□□□ -1.14
AC078880.2-201ENST00000547948 GRXCR2A6NFK2 248 aa7.94□□□□□ -1.14
AC078880.2-201ENST00000547948 SPDYE16A6NNV3 312 aaPredicted RBP7.94□□□□□ -1.14
AC078880.2-201ENST00000547948 CERKQ8TCT0 537 aa7.94□□□□□ -1.14
AC078880.2-201ENST00000547948 ABCA5Q8WWZ7 1642 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 LOC105371045A0A1W2PR82 267 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 NBPF26B4DH59 902 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 C3orf80F5H4A9 247 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 PDIA6Q15084 440 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 NKX2-3Q8TAU0 364 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 RAD54L2Q9Y4B4 1467 aa7.93□□□□□ -1.14
AC078880.2-201ENST00000547948 NUDT18Q6ZVK8 323 aa7.92□□□□□ -1.14
AC078880.2-201ENST00000547948 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 GGCXP38435 758 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 APLP1P51693 650 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 VSIG10Q8N0Z9 540 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 CEP162Q5TB80 1403 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 GAPVD1Q14C86 1478 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 RAPGEF2Q9Y4G8 1499 aa7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 TARBP1Q13395 1621 aaKnown RBP7.91□□□□□ -1.14
AC078880.2-201ENST00000547948 COPS2P61201 443 aa7.9□□□□□ -1.14
AC078880.2-201ENST00000547948 BBXQ8WY36 941 aaPredicted RBP7.9□□□□□ -1.14
AC078880.2-201ENST00000547948 PRIM1P49642 420 aaKnown RBP7.89□□□□□ -1.15
AC078880.2-201ENST00000547948 GRIN2BQ13224 1484 aa7.88□□□□□ -1.15
AC078880.2-201ENST00000547948 IGF1RP08069 1367 aa7.88□□□□□ -1.15
AC078880.2-201ENST00000547948 CARMIL1Q5VZK9 1371 aa7.88□□□□□ -1.15
AC078880.2-201ENST00000547948 PBRM1Q86U86 1689 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 EIF4G3O43432 1585 aaKnown RBP7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 E2F4Q16254 413 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 SWT1Q5T5J6 900 aaKnown RBP7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 ZNF775Q96BV0 537 aaPredicted RBP7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 BCANQ96GW7 911 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 KDM2AQ9Y2K7 1162 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 CLIP1P30622 1438 aa7.86□□□□□ -1.15
AC078880.2-201ENST00000547948 TDRD9Q8NDG6 1382 aaKnown RBP7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 ADAMTS12P58397 1594 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 PAXIP1Q6ZW49 1069 aaPredicted RBP7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 TMUB1Q9BVT8 246 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 CDHR5Q9HBB8 845 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 WDR70Q9NW82 654 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
AC078880.2-201ENST00000547948 MAGI1Q96QZ7 1491 aaPredicted RBP7.84□□□□□ -1.15
AC078880.2-201ENST00000547948 OSBPP22059 807 aa7.84□□□□□ -1.15
AC078880.2-201ENST00000547948 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
AC078880.2-201ENST00000547948 ARIH1Q9Y4X5 557 aaPredicted RBP7.84□□□□□ -1.15
AC078880.2-201ENST00000547948 ZPR1O75312 459 aa7.83□□□□□ -1.16
AC078880.2-201ENST00000547948 EFCAB5A4FU69 1503 aa7.83□□□□□ -1.16
AC078880.2-201ENST00000547948 PRKCSHP14314 528 aaPredicted RBP7.82□□□□□ -1.16
AC078880.2-201ENST00000547948 SLC19A1P41440 591 aa7.82□□□□□ -1.16
AC078880.2-201ENST00000547948 CFAP44Q96MT7 982 aa7.82□□□□□ -1.16
AC078880.2-201ENST00000547948 SNAPC4Q5SXM2 1469 aa7.81□□□□□ -1.16
AC078880.2-201ENST00000547948 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
AC078880.2-201ENST00000547948 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
AC078880.2-201ENST00000547948 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
AC078880.2-201ENST00000547948 AQRO60306 1485 aaKnown RBP eCLIP7.81□□□□□ -1.16
AC078880.2-201ENST00000547948 VPS8Q8N3P4 1428 aa7.8□□□□□ -1.16
AC078880.2-201ENST00000547948 PKDCCQ504Y2 493 aa7.8□□□□□ -1.16
AC078880.2-201ENST00000547948 PADI6Q6TGC4 694 aa7.8□□□□□ -1.16
AC078880.2-201ENST00000547948 SPRYD3Q8NCJ5 442 aa7.8□□□□□ -1.16
AC078880.2-201ENST00000547948 PCDHB3Q9Y5E6 796 aa7.8□□□□□ -1.16
AC078880.2-201ENST00000547948 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
AC078880.2-201ENST00000547948 TTC13Q8NBP0 860 aa7.78□□□□□ -1.16
AC078880.2-201ENST00000547948 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
AC078880.2-201ENST00000547948 NPDC1Q9NQX5 325 aaPredicted RBP7.78□□□□□ -1.16
AC078880.2-201ENST00000547948 SYNJ2O15056 1496 aa7.78□□□□□ -1.16
AC078880.2-201ENST00000547948 GRIN2AQ12879 1464 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms