RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 NPHP4O75161 1426 aaPredicted RBP30.18■■■□□ 2.42
C12orf49-203ENST00000547630 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
C12orf49-203ENST00000547630 ZFYVE9O95405 1425 aa30.17■■■□□ 2.42
C12orf49-203ENST00000547630 HDGFP51858 240 aaKnown RBP30.15■■■□□ 2.42
C12orf49-203ENST00000547630 NUTM2DQ5VT03 806 aaPredicted RBP30.14■■■□□ 2.41
C12orf49-203ENST00000547630 IQGAP1P46940 1657 aa30.13■■■□□ 2.41
C12orf49-203ENST00000547630 PPP1R15AO75807 674 aaPredicted RBP30.13■■■□□ 2.41
C12orf49-203ENST00000547630 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.13■■■□□ 2.41
C12orf49-203ENST00000547630 SENP3Q9H4L4 574 aaPredicted RBP30.09■■■□□ 2.41
C12orf49-203ENST00000547630 RGL3Q3MIN7 710 aa30.07■■■□□ 2.4
C12orf49-203ENST00000547630 DHX57Q6P158 1386 aaKnown RBP30.07■■■□□ 2.4
C12orf49-203ENST00000547630 SPATA31E1Q6ZUB1 1445 aa30.07■■■□□ 2.4
C12orf49-203ENST00000547630 NEXMIFQ5QGS0 1516 aa30.06■■■□□ 2.4
C12orf49-203ENST00000547630 BCANQ96GW7 911 aa30.06■■■□□ 2.4
C12orf49-203ENST00000547630 PLEKHG1Q9ULL1 1385 aa30.05■■■□□ 2.4
C12orf49-203ENST00000547630 RPGRIP1LQ68CZ1 1315 aa30.03■■■□□ 2.4
C12orf49-203ENST00000547630 ZNF335Q9H4Z2 1342 aaPredicted RBP30.02■■■□□ 2.4
C12orf49-203ENST00000547630 SLC26A8Q96RN1 970 aa30.01■■■□□ 2.39
C12orf49-203ENST00000547630 PPLO60437 1756 aa29.98■■■□□ 2.39
C12orf49-203ENST00000547630 VGFO15240 615 aaPredicted RBP29.96■■■□□ 2.39
C12orf49-203ENST00000547630 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
C12orf49-203ENST00000547630 LTBP4Q8N2S1 1624 aa29.92■■■□□ 2.38
C12orf49-203ENST00000547630 IFT172Q9UG01 1749 aa29.92■■■□□ 2.38
C12orf49-203ENST00000547630 TBX22Q9Y458 520 aa29.9■■■□□ 2.38
C12orf49-203ENST00000547630 SETBP1Q9Y6X0 1596 aa29.9■■■□□ 2.38
C12orf49-203ENST00000547630 SIN3AQ96ST3 1273 aa29.9■■■□□ 2.38
C12orf49-203ENST00000547630 NRXN3Q9Y4C0 1643 aa29.9■■■□□ 2.38
C12orf49-203ENST00000547630 ADGRF5Q8IZF2 1346 aa29.88■■■□□ 2.37
C12orf49-203ENST00000547630 DIP2AQ14689 1571 aa29.87■■■□□ 2.37
C12orf49-203ENST00000547630 STRCP1A6NGW2 1772 aa29.85■■■□□ 2.37
C12orf49-203ENST00000547630 NEUROD1Q13562 356 aa29.84■■■□□ 2.37
C12orf49-203ENST00000547630 CERKQ8TCT0 537 aa29.84■■■□□ 2.37
C12orf49-203ENST00000547630 KCNA6P17658 529 aa29.82■■■□□ 2.36
C12orf49-203ENST00000547630 DCAF11Q8TEB1 546 aa29.82■■■□□ 2.36
C12orf49-203ENST00000547630 CPS1P31327 1500 aa29.82■■■□□ 2.36
C12orf49-203ENST00000547630 KDM2AQ9Y2K7 1162 aa29.81■■■□□ 2.36
C12orf49-203ENST00000547630 MYOM2P54296 1465 aa29.8■■■□□ 2.36
C12orf49-203ENST00000547630 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
C12orf49-203ENST00000547630 CHD2O14647 1828 aaKnown RBP29.78■■■□□ 2.36
C12orf49-203ENST00000547630 PIK3R4Q99570 1358 aa29.78■■■□□ 2.36
C12orf49-203ENST00000547630 PIK3C2GO75747 1445 aa29.77■■■□□ 2.36
C12orf49-203ENST00000547630 METP08581 1390 aa29.77■■■□□ 2.36
C12orf49-203ENST00000547630 NWD1Q149M9 1564 aa29.76■■■□□ 2.36
C12orf49-203ENST00000547630 NRXN1Q9ULB1 1477 aa29.75■■■□□ 2.35
C12orf49-203ENST00000547630 SETD1AO15047 1707 aaKnown RBP29.75■■■□□ 2.35
C12orf49-203ENST00000547630 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
C12orf49-203ENST00000547630 STAC3Q96MF2 364 aa29.73■■■□□ 2.35
C12orf49-203ENST00000547630 LRRC7Q96NW7 1537 aa29.72■■■□□ 2.35
C12orf49-203ENST00000547630 AMOTL2Q9Y2J4 779 aa29.72■■■□□ 2.35
C12orf49-203ENST00000547630 L3MBTL2Q969R5 705 aa29.71■■■□□ 2.35
C12orf49-203ENST00000547630 PROSER2Q86WR7 435 aaPredicted RBP29.7■■■□□ 2.35
C12orf49-203ENST00000547630 NKTRP30414 1462 aaKnown RBP29.7■■■□□ 2.34
C12orf49-203ENST00000547630 CFAP70Q5T0N1 1121 aa29.68■■■□□ 2.34
C12orf49-203ENST00000547630 C14orf93Q9H972 538 aaKnown RBP29.68■■■□□ 2.34
C12orf49-203ENST00000547630 IQSEC2Q5JU85 1478 aa29.67■■■□□ 2.34
C12orf49-203ENST00000547630 RBM33Q96EV2 1170 aaKnown RBP29.66■■■□□ 2.34
C12orf49-203ENST00000547630 XRN1Q8IZH2 1706 aaKnown RBP29.65■■■□□ 2.34
C12orf49-203ENST00000547630 TMEM132EQ6IEE7 984 aa29.64■■■□□ 2.34
C12orf49-203ENST00000547630 CCER1Q8TC90 406 aaPredicted RBP29.64■■■□□ 2.34
C12orf49-203ENST00000547630 TMEM94Q12767 1356 aa29.64■■■□□ 2.34
C12orf49-203ENST00000547630 ASXL1Q8IXJ9 1541 aa29.63■■■□□ 2.33
C12orf49-203ENST00000547630 LAMC1P11047 1609 aa29.63■■■□□ 2.33
C12orf49-203ENST00000547630 XIRP1Q702N8 1843 aaKnown RBP29.62■■■□□ 2.33
C12orf49-203ENST00000547630 CLSPNQ9HAW4 1339 aa29.61■■■□□ 2.33
C12orf49-203ENST00000547630 TONSLQ96HA7 1378 aa29.6■■■□□ 2.33
C12orf49-203ENST00000547630 STK26Q9P289 416 aa29.58■■■□□ 2.33
C12orf49-203ENST00000547630 PRAG1Q86YV5 1406 aa29.58■■■□□ 2.33
C12orf49-203ENST00000547630 LRPPRCP42704 1394 aaKnown RBP29.56■■■□□ 2.32
C12orf49-203ENST00000547630 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
C12orf49-203ENST00000547630 ROBO2Q9HCK4 1378 aa29.54■■■□□ 2.32
C12orf49-203ENST00000547630 FBXO41Q8TF61 875 aa29.53■■■□□ 2.32
C12orf49-203ENST00000547630 PTCH1Q13635 1447 aa29.53■■■□□ 2.32
C12orf49-203ENST00000547630 UBAP1LF5GYI3 381 aa29.52■■■□□ 2.32
C12orf49-203ENST00000547630 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
C12orf49-203ENST00000547630 ADGRB1O14514 1584 aa29.52■■■□□ 2.32
C12orf49-203ENST00000547630 C14orf37Q86TY3 774 aa29.52■■■□□ 2.32
C12orf49-203ENST00000547630 NCOA3Q9Y6Q9 1424 aa29.51■■■□□ 2.31
C12orf49-203ENST00000547630 KIAA1210Q9ULL0 1709 aa29.49■■■□□ 2.31
C12orf49-203ENST00000547630 TECPR2O15040 1411 aa29.49■■■□□ 2.31
C12orf49-203ENST00000547630 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
C12orf49-203ENST00000547630 MSH6P52701 1360 aa29.48■■■□□ 2.31
C12orf49-203ENST00000547630 TOM1O60784 492 aa29.47■■■□□ 2.31
C12orf49-203ENST00000547630 NBPF1Q3BBV0 1214 aa29.47■■■□□ 2.31
C12orf49-203ENST00000547630 NBPF8Q3BBV2 869 aa29.45■■■□□ 2.31
C12orf49-203ENST00000547630 WAPLQ7Z5K2 1190 aa29.45■■■□□ 2.31
C12orf49-203ENST00000547630 C19orf44Q9H6X5 657 aa29.44■■■□□ 2.3
C12orf49-203ENST00000547630 TRAK1Q9UPV9 953 aa29.44■■■□□ 2.3
C12orf49-203ENST00000547630 TRPM1Q7Z4N2 1603 aa29.41■■■□□ 2.3
C12orf49-203ENST00000547630 PLEKHH1Q9ULM0 1364 aa29.41■■■□□ 2.3
C12orf49-203ENST00000547630 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.41■■■□□ 2.3
C12orf49-203ENST00000547630 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
C12orf49-203ENST00000547630 ADGRL3Q9HAR2 1447 aa29.4■■■□□ 2.3
C12orf49-203ENST00000547630 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
C12orf49-203ENST00000547630 FAM135BQ49AJ0 1406 aa29.4■■■□□ 2.3
C12orf49-203ENST00000547630 PIP4K2BP78356 416 aa29.39■■■□□ 2.3
C12orf49-203ENST00000547630 ILDR1Q86SU0 546 aaPredicted RBP29.39■■■□□ 2.3
C12orf49-203ENST00000547630 DLC1Q96QB1 1528 aa29.39■■■□□ 2.3
C12orf49-203ENST00000547630 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.29
C12orf49-203ENST00000547630 SCAF1Q9H7N4 1312 aaKnown RBP29.38■■■□□ 2.29
C12orf49-203ENST00000547630 ATF3P18847 181 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms