RNA–Protein interactions for RNA: ENST00000547543.5

WDR90-208, Transcript of WD repeat domain 90, human

TSL 5

Gene WDR90, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR90-208	ENST00000547543	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.54	■■■□□ 2.16
WDR90-208	ENST00000547543	ZFYVE9	O95405	1425 aa		28.52	■■■□□ 2.16
WDR90-208	ENST00000547543	SLC26A8	Q96RN1	970 aa		28.52	■■■□□ 2.16
WDR90-208	ENST00000547543	MYO5B	Q9ULV0	1848 aa		28.5	■■■□□ 2.15
WDR90-208	ENST00000547543	ZNF326	Q5BKZ1	582 aa	Known RBP	28.5	■■■□□ 2.15
WDR90-208	ENST00000547543	TRPM2	O94759	1503 aa		28.49	■■■□□ 2.15
WDR90-208	ENST00000547543	SCAF1	Q9H7N4	1312 aa	Known RBP	28.49	■■■□□ 2.15
WDR90-208	ENST00000547543	PLEKHG1	Q9ULL1	1385 aa		28.49	■■■□□ 2.15
WDR90-208	ENST00000547543	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.48	■■■□□ 2.15
WDR90-208	ENST00000547543	LRRC7	Q96NW7	1537 aa		28.45	■■■□□ 2.15
WDR90-208	ENST00000547543	TOM1	O60784	492 aa		28.45	■■■□□ 2.14
WDR90-208	ENST00000547543	CLTCL1	P53675	1640 aa		28.43	■■■□□ 2.14
WDR90-208	ENST00000547543	STRCP1	A6NGW2	1772 aa		28.43	■■■□□ 2.14
WDR90-208	ENST00000547543	SETD5	Q9C0A6	1442 aa		28.43	■■■□□ 2.14
WDR90-208	ENST00000547543	PIP4K2B	P78356	416 aa		28.42	■■■□□ 2.14
WDR90-208	ENST00000547543	ACIN1	Q9UKV3	1341 aa	Known RBP	28.42	■■■□□ 2.14
WDR90-208	ENST00000547543	KCNA6	P17658	529 aa		28.39	■■■□□ 2.14
WDR90-208	ENST00000547543	FOXD1	Q16676	465 aa		28.36	■■■□□ 2.13
WDR90-208	ENST00000547543	MPHOSPH9	Q99550	1183 aa		28.35	■■■□□ 2.13
WDR90-208	ENST00000547543	NKTR	P30414	1462 aa	Known RBP	28.34	■■■□□ 2.13
WDR90-208	ENST00000547543	DIP2A	Q14689	1571 aa		28.34	■■■□□ 2.13
WDR90-208	ENST00000547543	PROSER2	Q86WR7	435 aa	Predicted RBP	28.34	■■■□□ 2.13
WDR90-208	ENST00000547543	TBX22	Q9Y458	520 aa		28.33	■■■□□ 2.13
WDR90-208	ENST00000547543	RAB3GAP2	Q9H2M9	1393 aa		28.33	■■■□□ 2.13
WDR90-208	ENST00000547543	NWD1	Q149M9	1564 aa		28.33	■■■□□ 2.12
WDR90-208	ENST00000547543	KIF1B	O60333	1816 aa		28.32	■■■□□ 2.12
WDR90-208	ENST00000547543	TMEM94	Q12767	1356 aa		28.32	■■■□□ 2.12
WDR90-208	ENST00000547543	CCDC144A	A2RUR9	1427 aa		28.32	■■■□□ 2.12
WDR90-208	ENST00000547543	ADAMTS13	Q76LX8	1427 aa		28.29	■■■□□ 2.12
WDR90-208	ENST00000547543	NEXMIF	Q5QGS0	1516 aa		28.27	■■■□□ 2.12
WDR90-208	ENST00000547543	RBM33	Q96EV2	1170 aa	Known RBP	28.26	■■■□□ 2.11
WDR90-208	ENST00000547543	PIK3R4	Q99570	1358 aa		28.25	■■■□□ 2.11
WDR90-208	ENST00000547543	SETBP1	Q9Y6X0	1596 aa		28.24	■■■□□ 2.11
WDR90-208	ENST00000547543	C14orf37	Q86TY3	774 aa		28.24	■■■□□ 2.11
WDR90-208	ENST00000547543	MSH6	P52701	1360 aa		28.23	■■■□□ 2.11
WDR90-208	ENST00000547543	VGF	O15240	615 aa	Predicted RBP	28.22	■■■□□ 2.11
WDR90-208	ENST00000547543	RPGRIP1L	Q68CZ1	1315 aa		28.21	■■■□□ 2.11
WDR90-208	ENST00000547543	ALK	Q9UM73	1620 aa		28.19	■■■□□ 2.1
WDR90-208	ENST00000547543	CHD2	O14647	1828 aa	Known RBP	28.19	■■■□□ 2.1
WDR90-208	ENST00000547543	XIRP1	Q702N8	1843 aa	Known RBP	28.18	■■■□□ 2.1
WDR90-208	ENST00000547543	HSPA1L	P34931	641 aa		28.18	■■■□□ 2.1
WDR90-208	ENST00000547543	NRXN3	Q9Y4C0	1643 aa		28.18	■■■□□ 2.1
WDR90-208	ENST00000547543	RGL3	Q3MIN7	710 aa		28.17	■■■□□ 2.1
WDR90-208	ENST00000547543	AMOTL2	Q9Y2J4	779 aa		28.17	■■■□□ 2.1
WDR90-208	ENST00000547543	MET	P08581	1390 aa		28.12	■■■□□ 2.09
WDR90-208	ENST00000547543	PTPRU	Q92729	1446 aa		28.12	■■■□□ 2.09
WDR90-208	ENST00000547543	NCOA3	Q9Y6Q9	1424 aa		28.1	■■■□□ 2.09
WDR90-208	ENST00000547543	DISP3	Q9P2K9	1392 aa		28.09	■■■□□ 2.09
WDR90-208	ENST00000547543	PPL	O60437	1756 aa		28.09	■■■□□ 2.09
WDR90-208	ENST00000547543	SPATA31E1	Q6ZUB1	1445 aa		28.09	■■■□□ 2.09
WDR90-208	ENST00000547543	ANKRD30B	Q9BXX2	1392 aa		28.08	■■■□□ 2.09
WDR90-208	ENST00000547543	HRC	P23327	699 aa		28.07	■■■□□ 2.08
WDR90-208	ENST00000547543	XRN1	Q8IZH2	1706 aa	Known RBP	28.06	■■■□□ 2.08
WDR90-208	ENST00000547543	ATF3	P18847	181 aa		28.06	■■■□□ 2.08
WDR90-208	ENST00000547543	FAM135B	Q49AJ0	1406 aa		28.03	■■■□□ 2.08
WDR90-208	ENST00000547543	CADPS2	Q86UW7	1296 aa		28.03	■■■□□ 2.08
WDR90-208	ENST00000547543	C19orf44	Q9H6X5	657 aa		28.03	■■■□□ 2.08
WDR90-208	ENST00000547543	SLAIN2	Q9P270	581 aa		28.02	■■■□□ 2.08
WDR90-208	ENST00000547543	ADGRF5	Q8IZF2	1346 aa		28.01	■■■□□ 2.07
WDR90-208	ENST00000547543	ROBO1	Q9Y6N7	1651 aa		28	■■■□□ 2.07
WDR90-208	ENST00000547543	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	27.96	■■■□□ 2.07
WDR90-208	ENST00000547543	PTCH1	Q13635	1447 aa		27.96	■■■□□ 2.07
WDR90-208	ENST00000547543	SETD1A	O15047	1707 aa	Known RBP	27.95	■■■□□ 2.07
WDR90-208	ENST00000547543	IFT172	Q9UG01	1749 aa		27.95	■■■□□ 2.07
WDR90-208	ENST00000547543	DCC	P43146	1447 aa		27.94	■■■□□ 2.06
WDR90-208	ENST00000547543	PIK3C2G	O75747	1445 aa		27.92	■■■□□ 2.06
WDR90-208	ENST00000547543	ADGRL3	Q9HAR2	1447 aa		27.92	■■■□□ 2.06
WDR90-208	ENST00000547543	MYOM2	P54296	1465 aa		27.9	■■■□□ 2.06
WDR90-208	ENST00000547543	ROBO2	Q9HCK4	1378 aa		27.9	■■■□□ 2.06
WDR90-208	ENST00000547543	STK26	Q9P289	416 aa		27.89	■■■□□ 2.06
WDR90-208	ENST00000547543	MED1	Q15648	1581 aa	Predicted RBP	27.89	■■■□□ 2.05
WDR90-208	ENST00000547543	PRAG1	Q86YV5	1406 aa		27.86	■■■□□ 2.05
WDR90-208	ENST00000547543	PHF23	Q9BUL5	403 aa	Predicted RBP	27.86	■■■□□ 2.05
WDR90-208	ENST00000547543	NALCN	Q8IZF0	1738 aa		27.85	■■■□□ 2.05
WDR90-208	ENST00000547543	TMEM132E	Q6IEE7	984 aa		27.85	■■■□□ 2.05
WDR90-208	ENST00000547543	PHLPP1	O60346	1717 aa		27.84	■■■□□ 2.05
WDR90-208	ENST00000547543	KDM2A	Q9Y2K7	1162 aa		27.83	■■■□□ 2.05
WDR90-208	ENST00000547543	LRPPRC	P42704	1394 aa	Known RBP	27.83	■■■□□ 2.05
WDR90-208	ENST00000547543	LAMC1	P11047	1609 aa		27.82	■■■□□ 2.04
WDR90-208	ENST00000547543	DCAF11	Q8TEB1	546 aa		27.82	■■■□□ 2.04
WDR90-208	ENST00000547543	MST1R	Q04912	1400 aa		27.82	■■■□□ 2.04
WDR90-208	ENST00000547543	NRXN1	Q9ULB1	1477 aa		27.82	■■■□□ 2.04
WDR90-208	ENST00000547543	CFAP70	Q5T0N1	1121 aa		27.8	■■■□□ 2.04
WDR90-208	ENST00000547543	BRINP3	Q76B58	766 aa		27.8	■■■□□ 2.04
WDR90-208	ENST00000547543	ASXL1	Q8IXJ9	1541 aa		27.8	■■■□□ 2.04
WDR90-208	ENST00000547543	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.79	■■■□□ 2.04
WDR90-208	ENST00000547543	C14orf93	Q9H972	538 aa	Known RBP	27.79	■■■□□ 2.04
WDR90-208	ENST00000547543	DHX57	Q6P158	1386 aa	Known RBP	27.78	■■■□□ 2.04
WDR90-208	ENST00000547543	TECPR2	O15040	1411 aa		27.77	■■■□□ 2.04
WDR90-208	ENST00000547543	ABCC11	Q96J66	1382 aa		27.76	■■■□□ 2.03
WDR90-208	ENST00000547543	JCAD	Q9P266	1359 aa		27.75	■■■□□ 2.03
WDR90-208	ENST00000547543	AHDC1	Q5TGY3	1603 aa	Predicted RBP	27.75	■■■□□ 2.03
WDR90-208	ENST00000547543	WAPL	Q7Z5K2	1190 aa		27.74	■■■□□ 2.03
WDR90-208	ENST00000547543	STAC3	Q96MF2	364 aa		27.74	■■■□□ 2.03
WDR90-208	ENST00000547543	KNDC1	Q76NI1	1749 aa		27.74	■■■□□ 2.03
WDR90-208	ENST00000547543	C1orf167	Q5SNV9	1468 aa		27.72	■■■□□ 2.03
WDR90-208	ENST00000547543	COL16A1	Q07092	1604 aa	Predicted RBP	27.72	■■■□□ 2.03
WDR90-208	ENST00000547543	CDC42BPG	Q6DT37	1551 aa		27.71	■■■□□ 2.03
WDR90-208	ENST00000547543	PLEKHH1	Q9ULM0	1364 aa		27.69	■■■□□ 2.02
WDR90-208	ENST00000547543	TRIM26	Q12899	539 aa	Predicted RBP	27.68	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms