RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
LINC00661-202ENST00000547102 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
LINC00661-202ENST00000547102 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
LINC00661-202ENST00000547102 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
LINC00661-202ENST00000547102 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00661-202ENST00000547102 PLEKHG1Q9ULL1 1385 aa16.11■□□□□ 0.17
LINC00661-202ENST00000547102 SLC26A8Q96RN1 970 aa16.1■□□□□ 0.17
LINC00661-202ENST00000547102 TRIM52Q96A61 297 aa16.08■□□□□ 0.16
LINC00661-202ENST00000547102 KCNA6P17658 529 aa16.07■□□□□ 0.16
LINC00661-202ENST00000547102 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
LINC00661-202ENST00000547102 TRPM2O94759 1503 aa16.07■□□□□ 0.16
LINC00661-202ENST00000547102 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
LINC00661-202ENST00000547102 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
LINC00661-202ENST00000547102 DIP2AQ14689 1571 aa16.05■□□□□ 0.16
LINC00661-202ENST00000547102 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
LINC00661-202ENST00000547102 TMEM94Q12767 1356 aa16.04■□□□□ 0.16
LINC00661-202ENST00000547102 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
LINC00661-202ENST00000547102 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
LINC00661-202ENST00000547102 CLTCL1P53675 1640 aa16.04■□□□□ 0.16
LINC00661-202ENST00000547102 ALKQ9UM73 1620 aa16.04■□□□□ 0.16
LINC00661-202ENST00000547102 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
LINC00661-202ENST00000547102 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
LINC00661-202ENST00000547102 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
LINC00661-202ENST00000547102 KIF1BO60333 1816 aa16.03■□□□□ 0.16
LINC00661-202ENST00000547102 HSPA1LP34931 641 aa16.02■□□□□ 0.16
LINC00661-202ENST00000547102 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
LINC00661-202ENST00000547102 TBX22Q9Y458 520 aa16.01■□□□□ 0.15
LINC00661-202ENST00000547102 ADAMTS13Q76LX8 1427 aa16■□□□□ 0.15
LINC00661-202ENST00000547102 MSH6P52701 1360 aa15.99■□□□□ 0.15
LINC00661-202ENST00000547102 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
LINC00661-202ENST00000547102 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
LINC00661-202ENST00000547102 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
LINC00661-202ENST00000547102 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
LINC00661-202ENST00000547102 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
LINC00661-202ENST00000547102 C14orf37Q86TY3 774 aa15.95■□□□□ 0.14
LINC00661-202ENST00000547102 NRXN3Q9Y4C0 1643 aa15.94■□□□□ 0.14
LINC00661-202ENST00000547102 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
LINC00661-202ENST00000547102 CCDC144AA2RUR9 1427 aa15.92■□□□□ 0.14
LINC00661-202ENST00000547102 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
LINC00661-202ENST00000547102 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
LINC00661-202ENST00000547102 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
LINC00661-202ENST00000547102 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
LINC00661-202ENST00000547102 AMOTL2Q9Y2J4 779 aa15.91■□□□□ 0.14
LINC00661-202ENST00000547102 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
LINC00661-202ENST00000547102 FOXD1Q16676 465 aa15.9■□□□□ 0.14
LINC00661-202ENST00000547102 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
LINC00661-202ENST00000547102 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
LINC00661-202ENST00000547102 RPGRIP1LQ68CZ1 1315 aa15.9■□□□□ 0.14
LINC00661-202ENST00000547102 PPLO60437 1756 aa15.88■□□□□ 0.13
LINC00661-202ENST00000547102 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
LINC00661-202ENST00000547102 METP08581 1390 aa15.87■□□□□ 0.13
LINC00661-202ENST00000547102 ATF3P18847 181 aa15.87■□□□□ 0.13
LINC00661-202ENST00000547102 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
LINC00661-202ENST00000547102 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
LINC00661-202ENST00000547102 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.86■□□□□ 0.13
LINC00661-202ENST00000547102 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
LINC00661-202ENST00000547102 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
LINC00661-202ENST00000547102 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
LINC00661-202ENST00000547102 DCCP43146 1447 aa15.84■□□□□ 0.13
LINC00661-202ENST00000547102 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
LINC00661-202ENST00000547102 ILDR2Q71H61 639 aa15.83■□□□□ 0.12
LINC00661-202ENST00000547102 SETD1AO15047 1707 aaKnown RBP15.82■□□□□ 0.12
LINC00661-202ENST00000547102 ANKRD30BQ9BXX2 1392 aa15.82■□□□□ 0.12
LINC00661-202ENST00000547102 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
LINC00661-202ENST00000547102 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
LINC00661-202ENST00000547102 RGL3Q3MIN7 710 aa15.81■□□□□ 0.12
LINC00661-202ENST00000547102 IFT172Q9UG01 1749 aa15.8■□□□□ 0.12
LINC00661-202ENST00000547102 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
LINC00661-202ENST00000547102 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
LINC00661-202ENST00000547102 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.11
LINC00661-202ENST00000547102 COL16A1Q07092 1604 aaPredicted RBP15.76■□□□□ 0.11
LINC00661-202ENST00000547102 AHDC1Q5TGY3 1603 aaPredicted RBP15.76■□□□□ 0.11
LINC00661-202ENST00000547102 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
LINC00661-202ENST00000547102 JCADQ9P266 1359 aa15.75■□□□□ 0.11
LINC00661-202ENST00000547102 SOCS7O14512 581 aa15.75■□□□□ 0.11
LINC00661-202ENST00000547102 MST1RQ04912 1400 aa15.75■□□□□ 0.11
LINC00661-202ENST00000547102 ROBO2Q9HCK4 1378 aa15.75■□□□□ 0.11
LINC00661-202ENST00000547102 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
LINC00661-202ENST00000547102 PIK3C2GO75747 1445 aa15.74■□□□□ 0.11
LINC00661-202ENST00000547102 HRCP23327 699 aa15.73■□□□□ 0.11
LINC00661-202ENST00000547102 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
LINC00661-202ENST00000547102 MYOM2P54296 1465 aa15.72■□□□□ 0.11
LINC00661-202ENST00000547102 LAMC1P11047 1609 aa15.71■□□□□ 0.11
LINC00661-202ENST00000547102 NHSL1Q5SYE7 1610 aa15.7■□□□□ 0.1
LINC00661-202ENST00000547102 KNDC1Q76NI1 1749 aa15.7■□□□□ 0.1
LINC00661-202ENST00000547102 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
LINC00661-202ENST00000547102 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
LINC00661-202ENST00000547102 TECPR2O15040 1411 aa15.69■□□□□ 0.1
LINC00661-202ENST00000547102 STK26Q9P289 416 aa15.69■□□□□ 0.1
LINC00661-202ENST00000547102 SPATA31A6Q5VVP1 1343 aa15.68■□□□□ 0.1
LINC00661-202ENST00000547102 CDC42BPGQ6DT37 1551 aa15.68■□□□□ 0.1
LINC00661-202ENST00000547102 C1orf167Q5SNV9 1468 aa15.68■□□□□ 0.1
LINC00661-202ENST00000547102 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
LINC00661-202ENST00000547102 ABCC11Q96J66 1382 aa15.67■□□□□ 0.1
LINC00661-202ENST00000547102 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
LINC00661-202ENST00000547102 MEX3CQ5U5Q3 659 aaKnown RBP15.66■□□□□ 0.1
LINC00661-202ENST00000547102 TMEM132EQ6IEE7 984 aa15.66■□□□□ 0.1
LINC00661-202ENST00000547102 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
LINC00661-202ENST00000547102 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
LINC00661-202ENST00000547102 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms