RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 PPP1R15AO75807 674 aaPredicted RBP39.9■■■■□ 3.98
SRSF9-202ENST00000546942 RIMS2Q9UQ26 1411 aa39.89■■■■□ 3.98
SRSF9-202ENST00000546942 HDGFP51858 240 aaKnown RBP39.86■■■■□ 3.97
SRSF9-202ENST00000546942 ZFYVE9O95405 1425 aa39.85■■■■□ 3.97
SRSF9-202ENST00000546942 NUTM2DQ5VT03 806 aaPredicted RBP39.84■■■■□ 3.97
SRSF9-202ENST00000546942 TRIM52Q96A61 297 aa39.83■■■■□ 3.97
SRSF9-202ENST00000546942 SPHKAPQ2M3C7 1700 aa39.82■■■■□ 3.97
SRSF9-202ENST00000546942 HFM1A2PYH4 1435 aa39.81■■■■□ 3.96
SRSF9-202ENST00000546942 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.78■■■■□ 3.96
SRSF9-202ENST00000546942 PLEKHG1Q9ULL1 1385 aa39.77■■■■□ 3.96
SRSF9-202ENST00000546942 KCNA6P17658 529 aa39.77■■■■□ 3.96
SRSF9-202ENST00000546942 XIRP1Q702N8 1843 aaKnown RBP39.77■■■■□ 3.96
SRSF9-202ENST00000546942 ALKQ9UM73 1620 aa39.75■■■■□ 3.95
SRSF9-202ENST00000546942 HSPA1LP34931 641 aa39.73■■■■□ 3.95
SRSF9-202ENST00000546942 PROSER2Q86WR7 435 aaPredicted RBP39.71■■■■□ 3.95
SRSF9-202ENST00000546942 DISP3Q9P2K9 1392 aa39.71■■■■□ 3.95
SRSF9-202ENST00000546942 RBM33Q96EV2 1170 aaKnown RBP39.7■■■■□ 3.95
SRSF9-202ENST00000546942 ZNF326Q5BKZ1 582 aaKnown RBP39.68■■■■□ 3.94
SRSF9-202ENST00000546942 TMEM94Q12767 1356 aa39.67■■■■□ 3.94
SRSF9-202ENST00000546942 SLC4A1APQ9BWU0 796 aaKnown RBP39.65■■■■□ 3.94
SRSF9-202ENST00000546942 CLTCL1P53675 1640 aa39.63■■■■□ 3.93
SRSF9-202ENST00000546942 TBX22Q9Y458 520 aa39.62■■■■□ 3.93
SRSF9-202ENST00000546942 CHD2O14647 1828 aaKnown RBP39.62■■■■□ 3.93
SRSF9-202ENST00000546942 NWD1Q149M9 1564 aa39.62■■■■□ 3.93
SRSF9-202ENST00000546942 TRPM2O94759 1503 aa39.6■■■■□ 3.93
SRSF9-202ENST00000546942 NKTRP30414 1462 aaKnown RBP39.58■■■■□ 3.93
SRSF9-202ENST00000546942 ADAMTS13Q76LX8 1427 aa39.57■■■■□ 3.92
SRSF9-202ENST00000546942 KIF1BO60333 1816 aa39.56■■■■□ 3.92
SRSF9-202ENST00000546942 DIP2AQ14689 1571 aa39.51■■■■□ 3.92
SRSF9-202ENST00000546942 FOXD1Q16676 465 aa39.51■■■■□ 3.92
SRSF9-202ENST00000546942 MSH6P52701 1360 aa39.45■■■■□ 3.91
SRSF9-202ENST00000546942 NEXMIFQ5QGS0 1516 aa39.43■■■■□ 3.9
SRSF9-202ENST00000546942 NRXN3Q9Y4C0 1643 aa39.43■■■■□ 3.9
SRSF9-202ENST00000546942 C14orf37Q86TY3 774 aa39.42■■■■□ 3.9
SRSF9-202ENST00000546942 PIK3R4Q99570 1358 aa39.42■■■■□ 3.9
SRSF9-202ENST00000546942 AMOTL2Q9Y2J4 779 aa39.41■■■■□ 3.9
SRSF9-202ENST00000546942 SETBP1Q9Y6X0 1596 aa39.39■■■■□ 3.9
SRSF9-202ENST00000546942 MPHOSPH9Q99550 1183 aa39.39■■■■□ 3.9
SRSF9-202ENST00000546942 ILDR2Q71H61 639 aa39.38■■■■□ 3.89
SRSF9-202ENST00000546942 PTPRUQ92729 1446 aa39.38■■■■□ 3.89
SRSF9-202ENST00000546942 FAM135BQ49AJ0 1406 aa39.35■■■■□ 3.89
SRSF9-202ENST00000546942 SETD5Q9C0A6 1442 aa39.35■■■■□ 3.89
SRSF9-202ENST00000546942 ROBO1Q9Y6N7 1651 aa39.34■■■■□ 3.89
SRSF9-202ENST00000546942 MED1Q15648 1581 aaPredicted RBP39.31■■■■□ 3.88
SRSF9-202ENST00000546942 SLAIN2Q9P270 581 aa39.31■■■■□ 3.88
SRSF9-202ENST00000546942 METP08581 1390 aa39.31■■■■□ 3.88
SRSF9-202ENST00000546942 VGFO15240 615 aaPredicted RBP39.29■■■■□ 3.88
SRSF9-202ENST00000546942 NCOA3Q9Y6Q9 1424 aa39.28■■■■□ 3.88
SRSF9-202ENST00000546942 CCDC144AA2RUR9 1427 aa39.26■■■■□ 3.88
SRSF9-202ENST00000546942 RPGRIP1LQ68CZ1 1315 aa39.26■■■■□ 3.88
SRSF9-202ENST00000546942 XRN1Q8IZH2 1706 aaKnown RBP39.25■■■■□ 3.87
SRSF9-202ENST00000546942 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.25■■■■□ 3.87
SRSF9-202ENST00000546942 C19orf44Q9H6X5 657 aa39.24■■■■□ 3.87
SRSF9-202ENST00000546942 PPLO60437 1756 aa39.23■■■■□ 3.87
SRSF9-202ENST00000546942 ATF3P18847 181 aa39.22■■■■□ 3.87
SRSF9-202ENST00000546942 RGL3Q3MIN7 710 aa39.22■■■■□ 3.87
SRSF9-202ENST00000546942 RAB3GAP2Q9H2M9 1393 aa39.21■■■■□ 3.87
SRSF9-202ENST00000546942 ACIN1Q9UKV3 1341 aaKnown RBP39.2■■■■□ 3.87
SRSF9-202ENST00000546942 CADPS2Q86UW7 1296 aa39.18■■■■□ 3.86
SRSF9-202ENST00000546942 PHF23Q9BUL5 403 aaPredicted RBP39.14■■■■□ 3.86
SRSF9-202ENST00000546942 SETD1AO15047 1707 aaKnown RBP39.11■■■■□ 3.85
SRSF9-202ENST00000546942 PHLPP1O60346 1717 aa39.11■■■■□ 3.85
SRSF9-202ENST00000546942 SPATA31E1Q6ZUB1 1445 aa39.09■■■■□ 3.85
SRSF9-202ENST00000546942 ADGRF5Q8IZF2 1346 aa39.07■■■■□ 3.84
SRSF9-202ENST00000546942 IFT172Q9UG01 1749 aa39.03■■■■□ 3.84
SRSF9-202ENST00000546942 DCCP43146 1447 aa39■■■■□ 3.83
SRSF9-202ENST00000546942 NALCNQ8IZF0 1738 aa39■■■■□ 3.83
SRSF9-202ENST00000546942 ANKRD30BQ9BXX2 1392 aa38.99■■■■□ 3.83
SRSF9-202ENST00000546942 ADGRL3Q9HAR2 1447 aa38.98■■■■□ 3.83
SRSF9-202ENST00000546942 ROBO2Q9HCK4 1378 aa38.98■■■■□ 3.83
SRSF9-202ENST00000546942 SOCS7O14512 581 aa38.98■■■■□ 3.83
SRSF9-202ENST00000546942 BRINP3Q76B58 766 aa38.96■■■■□ 3.83
SRSF9-202ENST00000546942 PTCH1Q13635 1447 aa38.95■■■■□ 3.83
SRSF9-202ENST00000546942 COL16A1Q07092 1604 aaPredicted RBP38.94■■■■□ 3.82
SRSF9-202ENST00000546942 MST1RQ04912 1400 aa38.93■■■■□ 3.82
SRSF9-202ENST00000546942 STK26Q9P289 416 aa38.91■■■■□ 3.82
SRSF9-202ENST00000546942 JCADQ9P266 1359 aa38.91■■■■□ 3.82
SRSF9-202ENST00000546942 AHDC1Q5TGY3 1603 aaPredicted RBP38.89■■■■□ 3.82
SRSF9-202ENST00000546942 TMEM132EQ6IEE7 984 aa38.88■■■■□ 3.81
SRSF9-202ENST00000546942 ASXL1Q8IXJ9 1541 aa38.86■■■■□ 3.81
SRSF9-202ENST00000546942 HRCP23327 699 aa38.85■■■■□ 3.81
SRSF9-202ENST00000546942 PIK3C2GO75747 1445 aa38.85■■■■□ 3.81
SRSF9-202ENST00000546942 PRAG1Q86YV5 1406 aa38.82■■■■□ 3.81
SRSF9-202ENST00000546942 RGS17Q9UGC6 210 aaPredicted RBP38.82■■■■□ 3.8
SRSF9-202ENST00000546942 DDX17Q92841 729 aaKnown RBP38.79■■■■□ 3.8
SRSF9-202ENST00000546942 WAPLQ7Z5K2 1190 aa38.78■■■■□ 3.8
SRSF9-202ENST00000546942 LRPPRCP42704 1394 aaKnown RBP38.77■■■■□ 3.8
SRSF9-202ENST00000546942 C1orf167Q5SNV9 1468 aa38.77■■■■□ 3.8
SRSF9-202ENST00000546942 NHSL1Q5SYE7 1610 aa38.76■■■■□ 3.8
SRSF9-202ENST00000546942 CFAP70Q5T0N1 1121 aa38.74■■■■□ 3.79
SRSF9-202ENST00000546942 C14orf93Q9H972 538 aaKnown RBP38.74■■■■□ 3.79
SRSF9-202ENST00000546942 MYOM2P54296 1465 aa38.73■■■■□ 3.79
SRSF9-202ENST00000546942 SHPRHQ149N8 1683 aa38.72■■■■□ 3.79
SRSF9-202ENST00000546942 ORAI2Q96SN7 254 aa38.72■■■■□ 3.79
SRSF9-202ENST00000546942 NRXN1Q9ULB1 1477 aa38.72■■■■□ 3.79
SRSF9-202ENST00000546942 YTHDC2Q9H6S0 1430 aaKnown RBP38.72■■■■□ 3.79
SRSF9-202ENST00000546942 KDM2AQ9Y2K7 1162 aa38.71■■■■□ 3.79
SRSF9-202ENST00000546942 TECPR2O15040 1411 aa38.71■■■■□ 3.79
SRSF9-202ENST00000546942 ABCC11Q96J66 1382 aa38.7■■■■□ 3.79
SRSF9-202ENST00000546942 SPATA31A6Q5VVP1 1343 aa38.7■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms