RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 PPLO60437 1756 aa23.55■■□□□ 1.36
PPP1CA-211ENST00000546202 CHGAP10645 457 aaKnown RBP23.54■■□□□ 1.36
PPP1CA-211ENST00000546202 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
PPP1CA-211ENST00000546202 L3MBTL2Q969R5 705 aa23.53■■□□□ 1.36
PPP1CA-211ENST00000546202 NEXMIFQ5QGS0 1516 aa23.52■■□□□ 1.36
PPP1CA-211ENST00000546202 STAG3Q9UJ98 1225 aa23.51■■□□□ 1.35
PPP1CA-211ENST00000546202 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
PPP1CA-211ENST00000546202 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
PPP1CA-211ENST00000546202 LTBP4Q8N2S1 1624 aa23.5■■□□□ 1.35
PPP1CA-211ENST00000546202 SLIT1O75093 1534 aa23.48■■□□□ 1.35
PPP1CA-211ENST00000546202 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
PPP1CA-211ENST00000546202 MYOM2P54296 1465 aa23.47■■□□□ 1.35
PPP1CA-211ENST00000546202 ARHGAP23Q9P227 1491 aa23.47■■□□□ 1.35
PPP1CA-211ENST00000546202 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
PPP1CA-211ENST00000546202 STAC3Q96MF2 364 aa23.46■■□□□ 1.35
PPP1CA-211ENST00000546202 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
PPP1CA-211ENST00000546202 THEMISQ8N1K5 641 aaPredicted RBP23.45■■□□□ 1.34
PPP1CA-211ENST00000546202 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
PPP1CA-211ENST00000546202 RIMS2Q9UQ26 1411 aa23.44■■□□□ 1.34
PPP1CA-211ENST00000546202 PPP1R15AO75807 674 aaPredicted RBP23.43■■□□□ 1.34
PPP1CA-211ENST00000546202 NRXN1Q9ULB1 1477 aa23.42■■□□□ 1.34
PPP1CA-211ENST00000546202 NCKAP5LQ9HCH0 1330 aa23.39■■□□□ 1.34
PPP1CA-211ENST00000546202 KDM2AQ9Y2K7 1162 aa23.39■■□□□ 1.33
PPP1CA-211ENST00000546202 PRAG1Q86YV5 1406 aa23.39■■□□□ 1.33
PPP1CA-211ENST00000546202 IQSEC2Q5JU85 1478 aa23.38■■□□□ 1.33
PPP1CA-211ENST00000546202 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
PPP1CA-211ENST00000546202 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
PPP1CA-211ENST00000546202 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
PPP1CA-211ENST00000546202 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
PPP1CA-211ENST00000546202 ZNF335Q9H4Z2 1342 aaPredicted RBP23.36■■□□□ 1.33
PPP1CA-211ENST00000546202 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
PPP1CA-211ENST00000546202 ADGRF5Q8IZF2 1346 aa23.35■■□□□ 1.33
PPP1CA-211ENST00000546202 TRPM1Q7Z4N2 1603 aa23.35■■□□□ 1.33
PPP1CA-211ENST00000546202 UBAP1LF5GYI3 381 aa23.35■■□□□ 1.33
PPP1CA-211ENST00000546202 SCAF11Q99590 1463 aaKnown RBP23.35■■□□□ 1.33
PPP1CA-211ENST00000546202 PIK3C2GO75747 1445 aa23.34■■□□□ 1.33
PPP1CA-211ENST00000546202 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
PPP1CA-211ENST00000546202 LTKP29376 864 aa23.33■■□□□ 1.33
PPP1CA-211ENST00000546202 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
PPP1CA-211ENST00000546202 EID1Q9Y6B2 187 aa23.33■■□□□ 1.33
PPP1CA-211ENST00000546202 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
PPP1CA-211ENST00000546202 LAMC1P11047 1609 aa23.32■■□□□ 1.32
PPP1CA-211ENST00000546202 NRXN3Q9Y4C0 1643 aa23.32■■□□□ 1.32
PPP1CA-211ENST00000546202 SETBP1Q9Y6X0 1596 aa23.31■■□□□ 1.32
PPP1CA-211ENST00000546202 IQGAP1P46940 1657 aa23.31■■□□□ 1.32
PPP1CA-211ENST00000546202 PLEKHG1Q9ULL1 1385 aa23.3■■□□□ 1.32
PPP1CA-211ENST00000546202 SETD1AO15047 1707 aaKnown RBP23.29■■□□□ 1.32
PPP1CA-211ENST00000546202 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
PPP1CA-211ENST00000546202 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
PPP1CA-211ENST00000546202 MED14O60244 1454 aa23.27■■□□□ 1.32
PPP1CA-211ENST00000546202 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
PPP1CA-211ENST00000546202 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
PPP1CA-211ENST00000546202 ADAMTS13Q76LX8 1427 aa23.23■■□□□ 1.31
PPP1CA-211ENST00000546202 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
PPP1CA-211ENST00000546202 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
PPP1CA-211ENST00000546202 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
PPP1CA-211ENST00000546202 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
PPP1CA-211ENST00000546202 ADGRB1O14514 1584 aa23.21■■□□□ 1.31
PPP1CA-211ENST00000546202 ASXL1Q8IXJ9 1541 aa23.2■■□□□ 1.3
PPP1CA-211ENST00000546202 NBPF1Q3BBV0 1214 aa23.18■■□□□ 1.3
PPP1CA-211ENST00000546202 ROCK2O75116 1388 aaKnown RBP23.17■■□□□ 1.3
PPP1CA-211ENST00000546202 HSPA1LP34931 641 aa23.16■■□□□ 1.3
PPP1CA-211ENST00000546202 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
PPP1CA-211ENST00000546202 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
PPP1CA-211ENST00000546202 BCANQ96GW7 911 aa23.15■■□□□ 1.3
PPP1CA-211ENST00000546202 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
PPP1CA-211ENST00000546202 METP08581 1390 aa23.13■■□□□ 1.29
PPP1CA-211ENST00000546202 PIP4K2BP78356 416 aa23.12■■□□□ 1.29
PPP1CA-211ENST00000546202 SCAF1Q9H7N4 1312 aaKnown RBP23.11■■□□□ 1.29
PPP1CA-211ENST00000546202 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
PPP1CA-211ENST00000546202 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
PPP1CA-211ENST00000546202 CHD2O14647 1828 aaKnown RBP23.1■■□□□ 1.29
PPP1CA-211ENST00000546202 TMEM132EQ6IEE7 984 aa23.1■■□□□ 1.29
PPP1CA-211ENST00000546202 PIK3R4Q99570 1358 aa23.1■■□□□ 1.29
PPP1CA-211ENST00000546202 YTHDC2Q9H6S0 1430 aaKnown RBP23.08■■□□□ 1.29
PPP1CA-211ENST00000546202 LRPPRCP42704 1394 aaKnown RBP23.08■■□□□ 1.29
PPP1CA-211ENST00000546202 XRN1Q8IZH2 1706 aaKnown RBP23.08■■□□□ 1.28
PPP1CA-211ENST00000546202 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.28
PPP1CA-211ENST00000546202 PTPRUQ92729 1446 aa23.06■■□□□ 1.28
PPP1CA-211ENST00000546202 DLC1Q96QB1 1528 aa23.05■■□□□ 1.28
PPP1CA-211ENST00000546202 TOM1O60784 492 aa23.05■■□□□ 1.28
PPP1CA-211ENST00000546202 TECPR2O15040 1411 aa23.05■■□□□ 1.28
PPP1CA-211ENST00000546202 ABCC11Q96J66 1382 aa23.04■■□□□ 1.28
PPP1CA-211ENST00000546202 USP47Q96K76 1375 aa23.04■■□□□ 1.28
PPP1CA-211ENST00000546202 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
PPP1CA-211ENST00000546202 CPS1P31327 1500 aa23.03■■□□□ 1.28
PPP1CA-211ENST00000546202 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
PPP1CA-211ENST00000546202 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPP1CA-211ENST00000546202 TRAK1Q9UPV9 953 aa23■■□□□ 1.27
PPP1CA-211ENST00000546202 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
PPP1CA-211ENST00000546202 STK26Q9P289 416 aa22.99■■□□□ 1.27
PPP1CA-211ENST00000546202 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
PPP1CA-211ENST00000546202 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
PPP1CA-211ENST00000546202 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
PPP1CA-211ENST00000546202 AMOTL2Q9Y2J4 779 aa22.98■■□□□ 1.27
PPP1CA-211ENST00000546202 PTCH1Q13635 1447 aa22.98■■□□□ 1.27
PPP1CA-211ENST00000546202 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
PPP1CA-211ENST00000546202 FAM135BQ49AJ0 1406 aa22.97■■□□□ 1.27
PPP1CA-211ENST00000546202 KCNA6P17658 529 aa22.96■■□□□ 1.27
PPP1CA-211ENST00000546202 ROBO2Q9HCK4 1378 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms