RNA–Protein interactions for RNA: ENST00000546167.5

LRTM2-212, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-212ENST00000546167 SLC4A1APQ9BWU0 796 aaKnown RBP24.31■■□□□ 1.48
LRTM2-212ENST00000546167 BCANQ96GW7 911 aa24.28■■□□□ 1.48
LRTM2-212ENST00000546167 PLEKHG1Q9ULL1 1385 aa24.28■■□□□ 1.48
LRTM2-212ENST00000546167 SETD5Q9C0A6 1442 aa24.27■■□□□ 1.48
LRTM2-212ENST00000546167 KIF1BO60333 1816 aa24.26■■□□□ 1.47
LRTM2-212ENST00000546167 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
LRTM2-212ENST00000546167 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
LRTM2-212ENST00000546167 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
LRTM2-212ENST00000546167 LRRC7Q96NW7 1537 aa24.25■■□□□ 1.47
LRTM2-212ENST00000546167 UBAP1LF5GYI3 381 aa24.23■■□□□ 1.47
LRTM2-212ENST00000546167 NUTM2DQ5VT03 806 aaPredicted RBP24.23■■□□□ 1.47
LRTM2-212ENST00000546167 SLC26A8Q96RN1 970 aa24.23■■□□□ 1.47
LRTM2-212ENST00000546167 NWD1Q149M9 1564 aa24.22■■□□□ 1.47
LRTM2-212ENST00000546167 DIP2AQ14689 1571 aa24.21■■□□□ 1.47
LRTM2-212ENST00000546167 RAB3GAP2Q9H2M9 1393 aa24.21■■□□□ 1.47
LRTM2-212ENST00000546167 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
LRTM2-212ENST00000546167 NEXMIFQ5QGS0 1516 aa24.19■■□□□ 1.46
LRTM2-212ENST00000546167 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
LRTM2-212ENST00000546167 FOXD1Q16676 465 aa24.18■■□□□ 1.46
LRTM2-212ENST00000546167 NKTRP30414 1462 aaKnown RBP24.18■■□□□ 1.46
LRTM2-212ENST00000546167 MPHOSPH9Q99550 1183 aa24.17■■□□□ 1.46
LRTM2-212ENST00000546167 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
LRTM2-212ENST00000546167 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
LRTM2-212ENST00000546167 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.46
LRTM2-212ENST00000546167 KCNA6P17658 529 aa24.14■■□□□ 1.45
LRTM2-212ENST00000546167 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
LRTM2-212ENST00000546167 SETBP1Q9Y6X0 1596 aa24.13■■□□□ 1.45
LRTM2-212ENST00000546167 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
LRTM2-212ENST00000546167 CHD2O14647 1828 aaKnown RBP24.12■■□□□ 1.45
LRTM2-212ENST00000546167 TOM1O60784 492 aa24.12■■□□□ 1.45
LRTM2-212ENST00000546167 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
LRTM2-212ENST00000546167 ALKQ9UM73 1620 aa24.1■■□□□ 1.45
LRTM2-212ENST00000546167 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
LRTM2-212ENST00000546167 PIP4K2BP78356 416 aa24.08■■□□□ 1.45
LRTM2-212ENST00000546167 PPLO60437 1756 aa24.08■■□□□ 1.44
LRTM2-212ENST00000546167 PIK3R4Q99570 1358 aa24.06■■□□□ 1.44
LRTM2-212ENST00000546167 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
LRTM2-212ENST00000546167 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
LRTM2-212ENST00000546167 RBM33Q96EV2 1170 aaKnown RBP24.02■■□□□ 1.44
LRTM2-212ENST00000546167 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
LRTM2-212ENST00000546167 RPGRIP1LQ68CZ1 1315 aa24.01■■□□□ 1.43
LRTM2-212ENST00000546167 IFT172Q9UG01 1749 aa24.01■■□□□ 1.43
LRTM2-212ENST00000546167 PTPRUQ92729 1446 aa24■■□□□ 1.43
LRTM2-212ENST00000546167 MSH6P52701 1360 aa23.99■■□□□ 1.43
LRTM2-212ENST00000546167 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
LRTM2-212ENST00000546167 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
LRTM2-212ENST00000546167 METP08581 1390 aa23.96■■□□□ 1.43
LRTM2-212ENST00000546167 HRCP23327 699 aa23.95■■□□□ 1.42
LRTM2-212ENST00000546167 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
LRTM2-212ENST00000546167 AMOTL2Q9Y2J4 779 aa23.95■■□□□ 1.42
LRTM2-212ENST00000546167 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
LRTM2-212ENST00000546167 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
LRTM2-212ENST00000546167 ANKRD30BQ9BXX2 1392 aa23.92■■□□□ 1.42
LRTM2-212ENST00000546167 HSPA1LP34931 641 aa23.92■■□□□ 1.42
LRTM2-212ENST00000546167 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
LRTM2-212ENST00000546167 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.41
LRTM2-212ENST00000546167 ADGRF5Q8IZF2 1346 aa23.87■■□□□ 1.41
LRTM2-212ENST00000546167 PTCH1Q13635 1447 aa23.87■■□□□ 1.41
LRTM2-212ENST00000546167 MYOM2P54296 1465 aa23.87■■□□□ 1.41
LRTM2-212ENST00000546167 PIK3C2GO75747 1445 aa23.86■■□□□ 1.41
LRTM2-212ENST00000546167 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
LRTM2-212ENST00000546167 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
LRTM2-212ENST00000546167 PRAG1Q86YV5 1406 aa23.83■■□□□ 1.4
LRTM2-212ENST00000546167 LAMC1P11047 1609 aa23.82■■□□□ 1.4
LRTM2-212ENST00000546167 ASXL1Q8IXJ9 1541 aa23.82■■□□□ 1.4
LRTM2-212ENST00000546167 DCCP43146 1447 aa23.82■■□□□ 1.4
LRTM2-212ENST00000546167 ADGRL3Q9HAR2 1447 aa23.82■■□□□ 1.4
LRTM2-212ENST00000546167 ATF3P18847 181 aa23.81■■□□□ 1.4
LRTM2-212ENST00000546167 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
LRTM2-212ENST00000546167 NRXN1Q9ULB1 1477 aa23.81■■□□□ 1.4
LRTM2-212ENST00000546167 CADPS2Q86UW7 1296 aa23.8■■□□□ 1.4
LRTM2-212ENST00000546167 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
LRTM2-212ENST00000546167 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
LRTM2-212ENST00000546167 SLAIN2Q9P270 581 aa23.78■■□□□ 1.4
LRTM2-212ENST00000546167 DISP3Q9P2K9 1392 aa23.78■■□□□ 1.4
LRTM2-212ENST00000546167 MED1Q15648 1581 aaPredicted RBP23.76■■□□□ 1.39
LRTM2-212ENST00000546167 PHLPP1O60346 1717 aa23.75■■□□□ 1.39
LRTM2-212ENST00000546167 LRPPRCP42704 1394 aaKnown RBP23.74■■□□□ 1.39
LRTM2-212ENST00000546167 TECPR2O15040 1411 aa23.73■■□□□ 1.39
LRTM2-212ENST00000546167 MST1RQ04912 1400 aa23.72■■□□□ 1.39
LRTM2-212ENST00000546167 YTHDC2Q9H6S0 1430 aaKnown RBP23.71■■□□□ 1.39
LRTM2-212ENST00000546167 STK26Q9P289 416 aa23.7■■□□□ 1.38
LRTM2-212ENST00000546167 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
LRTM2-212ENST00000546167 AHDC1Q5TGY3 1603 aaPredicted RBP23.69■■□□□ 1.38
LRTM2-212ENST00000546167 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
LRTM2-212ENST00000546167 C14orf93Q9H972 538 aaKnown RBP23.68■■□□□ 1.38
LRTM2-212ENST00000546167 COL16A1Q07092 1604 aaPredicted RBP23.68■■□□□ 1.38
LRTM2-212ENST00000546167 CDC42BPGQ6DT37 1551 aa23.68■■□□□ 1.38
LRTM2-212ENST00000546167 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
LRTM2-212ENST00000546167 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
LRTM2-212ENST00000546167 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
LRTM2-212ENST00000546167 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
LRTM2-212ENST00000546167 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
LRTM2-212ENST00000546167 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
LRTM2-212ENST00000546167 ADGRB1O14514 1584 aa23.64■■□□□ 1.37
LRTM2-212ENST00000546167 NHSL1Q5SYE7 1610 aa23.63■■□□□ 1.37
LRTM2-212ENST00000546167 PLEKHH1Q9ULM0 1364 aa23.63■■□□□ 1.37
LRTM2-212ENST00000546167 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
LRTM2-212ENST00000546167 DLC1Q96QB1 1528 aa23.6■■□□□ 1.37
LRTM2-212ENST00000546167 WAPLQ7Z5K2 1190 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms