RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 ARHGEF11O15085 1522 aa7.87□□□□□ -1.15
LRP6-207ENST00000545658 PPP4CP60510 307 aa7.86□□□□□ -1.15
LRP6-207ENST00000545658 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
LRP6-207ENST00000545658 RNF40O75150 1001 aa7.85□□□□□ -1.15
LRP6-207ENST00000545658 NYAP1Q6ZVC0 841 aa7.85□□□□□ -1.15
LRP6-207ENST00000545658 TTC13Q8NBP0 860 aa7.85□□□□□ -1.15
LRP6-207ENST00000545658 KDM2AQ9Y2K7 1162 aa7.85□□□□□ -1.15
LRP6-207ENST00000545658 HDGFP51858 240 aaKnown RBP7.84□□□□□ -1.15
LRP6-207ENST00000545658 PTGDRQ13258 359 aa7.84□□□□□ -1.15
LRP6-207ENST00000545658 CYB5RLQ6IPT4 315 aa7.84□□□□□ -1.15
LRP6-207ENST00000545658 CEP164Q9UPV0 1460 aa7.82□□□□□ -1.16
LRP6-207ENST00000545658 IFFO2Q5TF58 517 aa7.82□□□□□ -1.16
LRP6-207ENST00000545658 TESPA1A2RU30 521 aaPredicted RBP7.81□□□□□ -1.16
LRP6-207ENST00000545658 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
LRP6-207ENST00000545658 EYA1Q99502 592 aa7.81□□□□□ -1.16
LRP6-207ENST00000545658 A0A0G2JS52 829 aa7.8□□□□□ -1.16
LRP6-207ENST00000545658 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
LRP6-207ENST00000545658 SWT1Q5T5J6 900 aaKnown RBP7.8□□□□□ -1.16
LRP6-207ENST00000545658 RBM26Q5T8P6 1007 aaKnown RBP7.8□□□□□ -1.16
LRP6-207ENST00000545658 FCHSD2O94868 740 aa7.79□□□□□ -1.16
LRP6-207ENST00000545658 KCNC4Q03721 635 aa7.79□□□□□ -1.16
LRP6-207ENST00000545658 SMYD5Q6GMV2 418 aa7.79□□□□□ -1.16
LRP6-207ENST00000545658 FANCD2Q9BXW9 1451 aa7.78□□□□□ -1.16
LRP6-207ENST00000545658 ARAP1Q96P48 1450 aa7.77□□□□□ -1.17
LRP6-207ENST00000545658 RBM46Q8TBY0 533 aaKnown RBP7.77□□□□□ -1.17
LRP6-207ENST00000545658 ADGRG1Q9Y653 693 aa7.77□□□□□ -1.17
LRP6-207ENST00000545658 SLC4A3P48751 1232 aa7.76□□□□□ -1.17
LRP6-207ENST00000545658 APLP1P51693 650 aa7.76□□□□□ -1.17
LRP6-207ENST00000545658 SLF2Q8IX21 1173 aa7.76□□□□□ -1.17
LRP6-207ENST00000545658 VSIG10Q8N0Z9 540 aa7.76□□□□□ -1.17
LRP6-207ENST00000545658 URB2Q14146 1524 aaKnown RBP7.74□□□□□ -1.17
LRP6-207ENST00000545658 DNAJB2P25686 324 aa7.74□□□□□ -1.17
LRP6-207ENST00000545658 TJAP1Q5JTD0 557 aa7.74□□□□□ -1.17
LRP6-207ENST00000545658 MTRQ99707 1265 aa7.74□□□□□ -1.17
LRP6-207ENST00000545658 MROH2BQ7Z745 1585 aa7.74□□□□□ -1.17
LRP6-207ENST00000545658 RCCD1A6NED2 376 aa7.73□□□□□ -1.17
LRP6-207ENST00000545658 HIC1Q14526 733 aa7.73□□□□□ -1.17
LRP6-207ENST00000545658 RGS20O76081 388 aa7.72□□□□□ -1.17
LRP6-207ENST00000545658 NECTIN2Q92692 538 aa7.72□□□□□ -1.17
LRP6-207ENST00000545658 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
LRP6-207ENST00000545658 ZNF608Q9ULD9 1512 aaPredicted RBP7.72□□□□□ -1.17
LRP6-207ENST00000545658 FECHP22830 423 aa7.71□□□□□ -1.18
LRP6-207ENST00000545658 COPS2P61201 443 aa7.71□□□□□ -1.18
LRP6-207ENST00000545658 ZNF516Q92618 1163 aa7.71□□□□□ -1.18
LRP6-207ENST00000545658 IL21Q9HBE4 155 aa7.71□□□□□ -1.18
LRP6-207ENST00000545658 RSF1Q96T23 1441 aaPredicted RBP7.7□□□□□ -1.18
LRP6-207ENST00000545658 GNPATO15228 680 aa7.7□□□□□ -1.18
LRP6-207ENST00000545658 OATP04181 439 aa7.7□□□□□ -1.18
LRP6-207ENST00000545658 CFTRP13569 1480 aa7.69□□□□□ -1.18
LRP6-207ENST00000545658 GPR37O15354 613 aa7.69□□□□□ -1.18
LRP6-207ENST00000545658 GPIHBP1Q8IV16 184 aa7.69□□□□□ -1.18
LRP6-207ENST00000545658 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
LRP6-207ENST00000545658 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
LRP6-207ENST00000545658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.68□□□□□ -1.18
LRP6-207ENST00000545658 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
LRP6-207ENST00000545658 NKX2-3Q8TAU0 364 aa7.67□□□□□ -1.18
LRP6-207ENST00000545658 PRR14Q9BWN1 585 aa7.67□□□□□ -1.18
LRP6-207ENST00000545658 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
LRP6-207ENST00000545658 CFHP08603 1231 aa7.66□□□□□ -1.18
LRP6-207ENST00000545658 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
LRP6-207ENST00000545658 SLC10A3P09131 477 aa7.65□□□□□ -1.18
LRP6-207ENST00000545658 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
LRP6-207ENST00000545658 KMT5BQ4FZB7 885 aa7.64□□□□□ -1.19
LRP6-207ENST00000545658 PPP1R18Q6NYC8 613 aa7.64□□□□□ -1.19
LRP6-207ENST00000545658 BLOC1S3Q6QNY0 202 aa7.64□□□□□ -1.19
LRP6-207ENST00000545658 IRX2Q9BZI1 471 aaPredicted RBP7.64□□□□□ -1.19
LRP6-207ENST00000545658 EIF4G3O43432 1585 aaKnown RBP7.63□□□□□ -1.19
LRP6-207ENST00000545658 ZPR1O75312 459 aa7.63□□□□□ -1.19
LRP6-207ENST00000545658 CHD1O14646 1710 aa7.62□□□□□ -1.19
LRP6-207ENST00000545658 ACTN4O43707 911 aaKnown RBP7.62□□□□□ -1.19
LRP6-207ENST00000545658 RSPH4AQ5TD94 716 aa7.61□□□□□ -1.19
LRP6-207ENST00000545658 PHOX2BQ99453 314 aa7.61□□□□□ -1.19
LRP6-207ENST00000545658 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
LRP6-207ENST00000545658 WIZO95785 1651 aa7.6□□□□□ -1.19
LRP6-207ENST00000545658 DDX11L8A8MPP1 907 aa7.6□□□□□ -1.19
LRP6-207ENST00000545658 TLL1O43897 1013 aa7.6□□□□□ -1.19
LRP6-207ENST00000545658 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
LRP6-207ENST00000545658 PRKD2Q9BZL6 878 aa7.6□□□□□ -1.19
LRP6-207ENST00000545658 DAXXQ9UER7 740 aaPredicted RBP7.6□□□□□ -1.19
LRP6-207ENST00000545658 GGCXP38435 758 aa7.59□□□□□ -1.19
LRP6-207ENST00000545658 AQRO60306 1485 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRP6-207ENST00000545658 TOPBP1Q92547 1522 aa7.58□□□□□ -1.2
LRP6-207ENST00000545658 NR1I2O75469 434 aa7.57□□□□□ -1.2
LRP6-207ENST00000545658 PUS10Q3MIT2 529 aaKnown RBP7.57□□□□□ -1.2
LRP6-207ENST00000545658 CLASP1Q7Z460 1538 aa7.57□□□□□ -1.2
LRP6-207ENST00000545658 MAP2K5Q13163 448 aa7.56□□□□□ -1.2
LRP6-207ENST00000545658 IRF6O14896 467 aa7.54□□□□□ -1.2
LRP6-207ENST00000545658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
LRP6-207ENST00000545658 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
LRP6-207ENST00000545658 SCUBE3Q8IX30 993 aa7.54□□□□□ -1.2
LRP6-207ENST00000545658 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
LRP6-207ENST00000545658 RNF223E7ERA6 249 aa7.53□□□□□ -1.2
LRP6-207ENST00000545658 PPEF1O14829 653 aaPredicted RBP7.53□□□□□ -1.2
LRP6-207ENST00000545658 S1PR4O95977 384 aa7.53□□□□□ -1.2
LRP6-207ENST00000545658 FUT2Q10981 343 aa7.53□□□□□ -1.2
LRP6-207ENST00000545658 V9GY48 417 aaPredicted RBP7.53□□□□□ -1.2
LRP6-207ENST00000545658 GAPVD1Q14C86 1478 aa7.53□□□□□ -1.2
LRP6-207ENST00000545658 ABCC8Q09428 1581 aa7.53□□□□□ -1.2
LRP6-207ENST00000545658 MINK1Q8N4C8 1332 aaPredicted RBP7.52□□□□□ -1.2
LRP6-207ENST00000545658 TARBP1Q13395 1621 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms