RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SCAF1Q9H7N4 1312 aaKnown RBP32.23■■■□□ 2.75
SCARB1-210ENST00000545493 DISP3Q9P2K9 1392 aa32.22■■■□□ 2.75
SCARB1-210ENST00000545493 NAIPQ13075 1403 aa32.21■■■□□ 2.75
SCARB1-210ENST00000545493 PLEKHG1Q9ULL1 1385 aa32.18■■■□□ 2.74
SCARB1-210ENST00000545493 HSPA1LP34931 641 aa32.16■■■□□ 2.74
SCARB1-210ENST00000545493 SLC26A8Q96RN1 970 aa32.16■■■□□ 2.74
SCARB1-210ENST00000545493 NKTRP30414 1462 aaKnown RBP32.16■■■□□ 2.74
SCARB1-210ENST00000545493 HFM1A2PYH4 1435 aa32.11■■■□□ 2.73
SCARB1-210ENST00000545493 TMEM94Q12767 1356 aa32.1■■■□□ 2.73
SCARB1-210ENST00000545493 CHD2O14647 1828 aaKnown RBP32.1■■■□□ 2.73
SCARB1-210ENST00000545493 KCNA6P17658 529 aa32.1■■■□□ 2.73
SCARB1-210ENST00000545493 CHGAP10645 457 aaKnown RBP32.09■■■□□ 2.73
SCARB1-210ENST00000545493 CLTCL1P53675 1640 aa32.08■■■□□ 2.73
SCARB1-210ENST00000545493 DIP2AQ14689 1571 aa32.08■■■□□ 2.73
SCARB1-210ENST00000545493 TRPM2O94759 1503 aa32.08■■■□□ 2.73
SCARB1-210ENST00000545493 PPP1R15AO75807 674 aaPredicted RBP32.07■■■□□ 2.72
SCARB1-210ENST00000545493 SENP3Q9H4L4 574 aaPredicted RBP32.07■■■□□ 2.72
SCARB1-210ENST00000545493 ADAMTS13Q76LX8 1427 aa32.07■■■□□ 2.72
SCARB1-210ENST00000545493 MED1Q15648 1581 aaPredicted RBP32.06■■■□□ 2.72
SCARB1-210ENST00000545493 BCANQ96GW7 911 aa32.03■■■□□ 2.72
SCARB1-210ENST00000545493 NRXN3Q9Y4C0 1643 aa32.02■■■□□ 2.72
SCARB1-210ENST00000545493 ILDR2Q71H61 639 aa32.02■■■□□ 2.72
SCARB1-210ENST00000545493 NUTM2DQ5VT03 806 aaPredicted RBP32.01■■■□□ 2.71
SCARB1-210ENST00000545493 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.01■■■□□ 2.71
SCARB1-210ENST00000545493 HDGFP51858 240 aaKnown RBP32■■■□□ 2.71
SCARB1-210ENST00000545493 RBM33Q96EV2 1170 aaKnown RBP31.98■■■□□ 2.71
SCARB1-210ENST00000545493 PROSER2Q86WR7 435 aaPredicted RBP31.96■■■□□ 2.71
SCARB1-210ENST00000545493 SETBP1Q9Y6X0 1596 aa31.96■■■□□ 2.71
SCARB1-210ENST00000545493 NEXMIFQ5QGS0 1516 aa31.95■■■□□ 2.71
SCARB1-210ENST00000545493 ROBO1Q9Y6N7 1651 aa31.95■■■□□ 2.7
SCARB1-210ENST00000545493 TBX22Q9Y458 520 aa31.94■■■□□ 2.7
SCARB1-210ENST00000545493 KIF1BO60333 1816 aa31.93■■■□□ 2.7
SCARB1-210ENST00000545493 PIK3R4Q99570 1358 aa31.91■■■□□ 2.7
SCARB1-210ENST00000545493 FAM135BQ49AJ0 1406 aa31.91■■■□□ 2.7
SCARB1-210ENST00000545493 XRN1Q8IZH2 1706 aaKnown RBP31.89■■■□□ 2.7
SCARB1-210ENST00000545493 PTPRUQ92729 1446 aa31.89■■■□□ 2.7
SCARB1-210ENST00000545493 MSH6P52701 1360 aa31.88■■■□□ 2.69
SCARB1-210ENST00000545493 TRIM52Q96A61 297 aa31.85■■■□□ 2.69
SCARB1-210ENST00000545493 NCOA3Q9Y6Q9 1424 aa31.83■■■□□ 2.69
SCARB1-210ENST00000545493 ZNF326Q5BKZ1 582 aaKnown RBP31.82■■■□□ 2.68
SCARB1-210ENST00000545493 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.8■■■□□ 2.68
SCARB1-210ENST00000545493 SETD1AO15047 1707 aaKnown RBP31.79■■■□□ 2.68
SCARB1-210ENST00000545493 SLC4A1APQ9BWU0 796 aaKnown RBP31.79■■■□□ 2.68
SCARB1-210ENST00000545493 METP08581 1390 aa31.75■■■□□ 2.67
SCARB1-210ENST00000545493 PPLO60437 1756 aa31.75■■■□□ 2.67
SCARB1-210ENST00000545493 AMOTL2Q9Y2J4 779 aa31.74■■■□□ 2.67
SCARB1-210ENST00000545493 PHLPP1O60346 1717 aa31.72■■■□□ 2.67
SCARB1-210ENST00000545493 SOCS7O14512 581 aa31.72■■■□□ 2.67
SCARB1-210ENST00000545493 COL16A1Q07092 1604 aaPredicted RBP31.69■■■□□ 2.66
SCARB1-210ENST00000545493 SLAIN2Q9P270 581 aa31.69■■■□□ 2.66
SCARB1-210ENST00000545493 FOXD1Q16676 465 aa31.68■■■□□ 2.66
SCARB1-210ENST00000545493 NALCNQ8IZF0 1738 aa31.66■■■□□ 2.66
SCARB1-210ENST00000545493 C14orf37Q86TY3 774 aa31.66■■■□□ 2.66
SCARB1-210ENST00000545493 DCCP43146 1447 aa31.66■■■□□ 2.66
SCARB1-210ENST00000545493 IFT172Q9UG01 1749 aa31.64■■■□□ 2.66
SCARB1-210ENST00000545493 AHDC1Q5TGY3 1603 aaPredicted RBP31.64■■■□□ 2.65
SCARB1-210ENST00000545493 PHF23Q9BUL5 403 aaPredicted RBP31.63■■■□□ 2.65
SCARB1-210ENST00000545493 C19orf44Q9H6X5 657 aa31.63■■■□□ 2.65
SCARB1-210ENST00000545493 CCDC144AA2RUR9 1427 aa31.62■■■□□ 2.65
SCARB1-210ENST00000545493 CADPS2Q86UW7 1296 aa31.61■■■□□ 2.65
SCARB1-210ENST00000545493 PTCH1Q13635 1447 aa31.6■■■□□ 2.65
SCARB1-210ENST00000545493 SPATA31E1Q6ZUB1 1445 aa31.6■■■□□ 2.65
SCARB1-210ENST00000545493 ADGRL3Q9HAR2 1447 aa31.59■■■□□ 2.65
SCARB1-210ENST00000545493 RPGRIP1LQ68CZ1 1315 aa31.59■■■□□ 2.65
SCARB1-210ENST00000545493 MPHOSPH9Q99550 1183 aa31.59■■■□□ 2.65
SCARB1-210ENST00000545493 PRAG1Q86YV5 1406 aa31.58■■■□□ 2.65
SCARB1-210ENST00000545493 SETD5Q9C0A6 1442 aa31.58■■■□□ 2.65
SCARB1-210ENST00000545493 ATF3P18847 181 aa31.57■■■□□ 2.64
SCARB1-210ENST00000545493 MST1RQ04912 1400 aa31.57■■■□□ 2.64
SCARB1-210ENST00000545493 VGFO15240 615 aaPredicted RBP31.55■■■□□ 2.64
SCARB1-210ENST00000545493 ASXL1Q8IXJ9 1541 aa31.54■■■□□ 2.64
SCARB1-210ENST00000545493 JCADQ9P266 1359 aa31.53■■■□□ 2.64
SCARB1-210ENST00000545493 NHSL1Q5SYE7 1610 aa31.52■■■□□ 2.64
SCARB1-210ENST00000545493 RAB3GAP2Q9H2M9 1393 aa31.51■■■□□ 2.63
SCARB1-210ENST00000545493 ROBO2Q9HCK4 1378 aa31.51■■■□□ 2.63
SCARB1-210ENST00000545493 SHPRHQ149N8 1683 aa31.51■■■□□ 2.63
SCARB1-210ENST00000545493 BRINP3Q76B58 766 aa31.49■■■□□ 2.63
SCARB1-210ENST00000545493 RGS17Q9UGC6 210 aaPredicted RBP31.49■■■□□ 2.63
SCARB1-210ENST00000545493 ADGRF5Q8IZF2 1346 aa31.46■■■□□ 2.63
SCARB1-210ENST00000545493 LRP6O75581 1613 aa31.46■■■□□ 2.63
SCARB1-210ENST00000545493 PIK3C2GO75747 1445 aa31.43■■■□□ 2.62
SCARB1-210ENST00000545493 ACIN1Q9UKV3 1341 aaKnown RBP31.43■■■□□ 2.62
SCARB1-210ENST00000545493 ANKRD30BQ9BXX2 1392 aa31.43■■■□□ 2.62
SCARB1-210ENST00000545493 KNDC1Q76NI1 1749 aa31.42■■■□□ 2.62
SCARB1-210ENST00000545493 RGL3Q3MIN7 710 aa31.41■■■□□ 2.62
SCARB1-210ENST00000545493 TECPR2O15040 1411 aa31.38■■■□□ 2.61
SCARB1-210ENST00000545493 C1orf167Q5SNV9 1468 aa31.38■■■□□ 2.61
SCARB1-210ENST00000545493 CDC42BPGQ6DT37 1551 aa31.37■■■□□ 2.61
SCARB1-210ENST00000545493 LAMC1P11047 1609 aa31.37■■■□□ 2.61
SCARB1-210ENST00000545493 MYOM2P54296 1465 aa31.36■■■□□ 2.61
SCARB1-210ENST00000545493 NRXN1Q9ULB1 1477 aa31.35■■■□□ 2.61
SCARB1-210ENST00000545493 SPATA31A6Q5VVP1 1343 aa31.33■■■□□ 2.61
SCARB1-210ENST00000545493 LRPPRCP42704 1394 aaKnown RBP31.3■■■□□ 2.6
SCARB1-210ENST00000545493 POTEAQ6S8J7 498 aa31.3■■■□□ 2.6
SCARB1-210ENST00000545493 DDX17Q92841 729 aaKnown RBP31.27■■■□□ 2.6
SCARB1-210ENST00000545493 YTHDC2Q9H6S0 1430 aaKnown RBP31.25■■■□□ 2.59
SCARB1-210ENST00000545493 ABCC11Q96J66 1382 aa31.24■■■□□ 2.59
SCARB1-210ENST00000545493 PLEKHH1Q9ULM0 1364 aa31.24■■■□□ 2.59
SCARB1-210ENST00000545493 TMEM132EQ6IEE7 984 aa31.23■■■□□ 2.59
SCARB1-210ENST00000545493 PNPLA6Q8IY17 1366 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms