RNA–Protein interactions for RNA: ENST00000545097.1

CCR3-208, Transcript of C-C motif chemokine receptor 3, human

TSL 1 (best) BASIC

Gene CCR3, Length 1,786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCR3-208	ENST00000545097	FBXO41	Q8TF61	875 aa		12.25	□□□□□ -0.45
CCR3-208	ENST00000545097	TRIM52	Q96A61	297 aa		12.25	□□□□□ -0.45
CCR3-208	ENST00000545097	NEXMIF	Q5QGS0	1516 aa		12.25	□□□□□ -0.45
CCR3-208	ENST00000545097	RAB3GAP2	Q9H2M9	1393 aa		12.25	□□□□□ -0.45
CCR3-208	ENST00000545097	SLC52A1	Q9NWF4	448 aa		12.25	□□□□□ -0.45
CCR3-208	ENST00000545097	CHD2	O14647	1828 aa	Known RBP	12.24	□□□□□ -0.45
CCR3-208	ENST00000545097	SETD5	Q9C0A6	1442 aa		12.24	□□□□□ -0.45
CCR3-208	ENST00000545097	LRRC7	Q96NW7	1537 aa		12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	CHGA	P10645	457 aa	Known RBP	12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	STAG3	Q9UJ98	1225 aa		12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	PPL	O60437	1756 aa		12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	SETD1A	O15047	1707 aa	Known RBP	12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	SLC26A8	Q96RN1	970 aa		12.23	□□□□□ -0.45
CCR3-208	ENST00000545097	ADAMTS13	Q76LX8	1427 aa		12.22	□□□□□ -0.45
CCR3-208	ENST00000545097	NWD1	Q149M9	1564 aa		12.22	□□□□□ -0.45
CCR3-208	ENST00000545097	IFT172	Q9UG01	1749 aa		12.22	□□□□□ -0.45
CCR3-208	ENST00000545097	CPS1	P31327	1500 aa		12.22	□□□□□ -0.45
CCR3-208	ENST00000545097	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.21	□□□□□ -0.45
CCR3-208	ENST00000545097	IQSEC2	Q5JU85	1478 aa		12.21	□□□□□ -0.46
CCR3-208	ENST00000545097	RBM33	Q96EV2	1170 aa	Known RBP	12.2	□□□□□ -0.46
CCR3-208	ENST00000545097	PLEKHG1	Q9ULL1	1385 aa		12.2	□□□□□ -0.46
CCR3-208	ENST00000545097	MPHOSPH9	Q99550	1183 aa		12.19	□□□□□ -0.46
CCR3-208	ENST00000545097	EID1	Q9Y6B2	187 aa		12.18	□□□□□ -0.46
CCR3-208	ENST00000545097	PTPRU	Q92729	1446 aa		12.18	□□□□□ -0.46
CCR3-208	ENST00000545097	SETBP1	Q9Y6X0	1596 aa		12.18	□□□□□ -0.46
CCR3-208	ENST00000545097	XRN1	Q8IZH2	1706 aa	Known RBP	12.17	□□□□□ -0.46
CCR3-208	ENST00000545097	SPATA31E1	Q6ZUB1	1445 aa		12.16	□□□□□ -0.46
CCR3-208	ENST00000545097	DIP2A	Q14689	1571 aa		12.15	□□□□□ -0.46
CCR3-208	ENST00000545097	UBAP1L	F5GYI3	381 aa		12.13	□□□□□ -0.47
CCR3-208	ENST00000545097	PPP1R15A	O75807	674 aa	Predicted RBP	12.13	□□□□□ -0.47
CCR3-208	ENST00000545097	MET	P08581	1390 aa		12.13	□□□□□ -0.47
CCR3-208	ENST00000545097	ASXL1	Q8IXJ9	1541 aa		12.13	□□□□□ -0.47
CCR3-208	ENST00000545097	ZNF326	Q5BKZ1	582 aa	Known RBP	12.13	□□□□□ -0.47
CCR3-208	ENST00000545097	TMEM94	Q12767	1356 aa		12.12	□□□□□ -0.47
CCR3-208	ENST00000545097	NKTR	P30414	1462 aa	Known RBP	12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	KCNA6	P17658	529 aa		12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	BCAN	Q96GW7	911 aa		12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	CCDC144A	A2RUR9	1427 aa		12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	NALCN	Q8IZF0	1738 aa		12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.11	□□□□□ -0.47
CCR3-208	ENST00000545097	KCNA4	P22459	653 aa		12.1	□□□□□ -0.47
CCR3-208	ENST00000545097	ANKRD30B	Q9BXX2	1392 aa		12.1	□□□□□ -0.47
CCR3-208	ENST00000545097	PIP4K2B	P78356	416 aa		12.09	□□□□□ -0.47
CCR3-208	ENST00000545097	ADGRF5	Q8IZF2	1346 aa		12.09	□□□□□ -0.47
CCR3-208	ENST00000545097	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
CCR3-208	ENST00000545097	TBX22	Q9Y458	520 aa		12.09	□□□□□ -0.47
CCR3-208	ENST00000545097	RGL3	Q3MIN7	710 aa		12.08	□□□□□ -0.48
CCR3-208	ENST00000545097	ADRA2B	P18089	450 aa		12.07	□□□□□ -0.48
CCR3-208	ENST00000545097	ROBO1	Q9Y6N7	1651 aa		12.07	□□□□□ -0.48
CCR3-208	ENST00000545097	PROSER2	Q86WR7	435 aa	Predicted RBP	12.06	□□□□□ -0.48
CCR3-208	ENST00000545097	HSPA1L	P34931	641 aa		12.05	□□□□□ -0.48
CCR3-208	ENST00000545097	SCAF1	Q9H7N4	1312 aa	Known RBP	12.05	□□□□□ -0.48
CCR3-208	ENST00000545097	AMOTL2	Q9Y2J4	779 aa		12.05	□□□□□ -0.48
CCR3-208	ENST00000545097	NRXN1	Q9ULB1	1477 aa		12.04	□□□□□ -0.48
CCR3-208	ENST00000545097	PIK3C2G	O75747	1445 aa		12.04	□□□□□ -0.48
CCR3-208	ENST00000545097	PIK3R4	Q99570	1358 aa		12.04	□□□□□ -0.48
CCR3-208	ENST00000545097	KNDC1	Q76NI1	1749 aa		12.03	□□□□□ -0.48
CCR3-208	ENST00000545097	ROBO2	Q9HCK4	1378 aa		12.03	□□□□□ -0.48
CCR3-208	ENST00000545097	HRC	P23327	699 aa		12.02	□□□□□ -0.48
CCR3-208	ENST00000545097	HDGF	P51858	240 aa	Known RBP	12.02	□□□□□ -0.48
CCR3-208	ENST00000545097	DHX57	Q6P158	1386 aa	Known RBP	12.02	□□□□□ -0.49
CCR3-208	ENST00000545097	MYOM2	P54296	1465 aa		12.01	□□□□□ -0.49
CCR3-208	ENST00000545097	RPGRIP1L	Q68CZ1	1315 aa		12.01	□□□□□ -0.49
CCR3-208	ENST00000545097	TOM1	O60784	492 aa		12.01	□□□□□ -0.49
CCR3-208	ENST00000545097	PLEKHH1	Q9ULM0	1364 aa		11.99	□□□□□ -0.49
CCR3-208	ENST00000545097	VGF	O15240	615 aa	Predicted RBP	11.99	□□□□□ -0.49
CCR3-208	ENST00000545097	TMEM132E	Q6IEE7	984 aa		11.99	□□□□□ -0.49
CCR3-208	ENST00000545097	PHLPP1	O60346	1717 aa		11.99	□□□□□ -0.49
CCR3-208	ENST00000545097	PRAG1	Q86YV5	1406 aa		11.99	□□□□□ -0.49
CCR3-208	ENST00000545097	ADGRB1	O14514	1584 aa		11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	PTCH1	Q13635	1447 aa		11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	LAMC1	P11047	1609 aa		11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	COL16A1	Q07092	1604 aa	Predicted RBP	11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	MSH6	P52701	1360 aa		11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	RGPD8	O14715	1765 aa	Predicted RBP	11.98	□□□□□ -0.49
CCR3-208	ENST00000545097	MED1	Q15648	1581 aa	Predicted RBP	11.97	□□□□□ -0.49
CCR3-208	ENST00000545097	MST1R	Q04912	1400 aa		11.97	□□□□□ -0.49
CCR3-208	ENST00000545097	CFAP70	Q5T0N1	1121 aa		11.97	□□□□□ -0.49
CCR3-208	ENST00000545097	ADGRL3	Q9HAR2	1447 aa		11.97	□□□□□ -0.49
CCR3-208	ENST00000545097	FAM135B	Q49AJ0	1406 aa		11.96	□□□□□ -0.49
CCR3-208	ENST00000545097	NHSL1	Q5SYE7	1610 aa		11.96	□□□□□ -0.49
CCR3-208	ENST00000545097	NCOA3	Q9Y6Q9	1424 aa		11.95	□□□□□ -0.5
CCR3-208	ENST00000545097	SIN3A	Q96ST3	1273 aa		11.95	□□□□□ -0.5
CCR3-208	ENST00000545097	STK26	Q9P289	416 aa		11.95	□□□□□ -0.5
CCR3-208	ENST00000545097	TECPR2	O15040	1411 aa		11.95	□□□□□ -0.5
CCR3-208	ENST00000545097	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.95	□□□□□ -0.5
CCR3-208	ENST00000545097	LRPPRC	P42704	1394 aa	Known RBP	11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	WAPL	Q7Z5K2	1190 aa		11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	SLAIN2	Q9P270	581 aa		11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	KDM2A	Q9Y2K7	1162 aa		11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	ACIN1	Q9UKV3	1341 aa	Known RBP	11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	FMN2	Q9NZ56	1722 aa		11.94	□□□□□ -0.5
CCR3-208	ENST00000545097	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.93	□□□□□ -0.5
CCR3-208	ENST00000545097	C14orf37	Q86TY3	774 aa		11.93	□□□□□ -0.5
CCR3-208	ENST00000545097	C14orf93	Q9H972	538 aa	Known RBP	11.93	□□□□□ -0.5
CCR3-208	ENST00000545097	DCAF11	Q8TEB1	546 aa		11.92	□□□□□ -0.5
CCR3-208	ENST00000545097	DDX17	Q92841	729 aa	Known RBP	11.92	□□□□□ -0.5
CCR3-208	ENST00000545097	C19orf44	Q9H6X5	657 aa		11.92	□□□□□ -0.5
CCR3-208	ENST00000545097	CDC42BPG	Q6DT37	1551 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms