RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 RIMS2Q9UQ26 1411 aa23.64■■□□□ 1.37
LDHB-210ENST00000544151 XIRP1Q702N8 1843 aaKnown RBP23.63■■□□□ 1.37
LDHB-210ENST00000544151 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
LDHB-210ENST00000544151 CLTCL1P53675 1640 aa23.6■■□□□ 1.37
LDHB-210ENST00000544151 TRPM2O94759 1503 aa23.59■■□□□ 1.37
LDHB-210ENST00000544151 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
LDHB-210ENST00000544151 PPP1R15AO75807 674 aaPredicted RBP23.58■■□□□ 1.37
LDHB-210ENST00000544151 KIF1BO60333 1816 aa23.58■■□□□ 1.37
LDHB-210ENST00000544151 ALKQ9UM73 1620 aa23.58■■□□□ 1.36
LDHB-210ENST00000544151 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
LDHB-210ENST00000544151 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
LDHB-210ENST00000544151 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
LDHB-210ENST00000544151 BCANQ96GW7 911 aa23.56■■□□□ 1.36
LDHB-210ENST00000544151 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
LDHB-210ENST00000544151 TOM1O60784 492 aa23.54■■□□□ 1.36
LDHB-210ENST00000544151 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
LDHB-210ENST00000544151 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
LDHB-210ENST00000544151 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
LDHB-210ENST00000544151 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
LDHB-210ENST00000544151 NKTRP30414 1462 aaKnown RBP23.53■■□□□ 1.36
LDHB-210ENST00000544151 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
LDHB-210ENST00000544151 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
LDHB-210ENST00000544151 KCNA6P17658 529 aa23.48■■□□□ 1.35
LDHB-210ENST00000544151 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
LDHB-210ENST00000544151 ADAMTS13Q76LX8 1427 aa23.47■■□□□ 1.35
LDHB-210ENST00000544151 TMEM94Q12767 1356 aa23.46■■□□□ 1.35
LDHB-210ENST00000544151 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
LDHB-210ENST00000544151 SLC4A1APQ9BWU0 796 aaKnown RBP23.46■■□□□ 1.35
LDHB-210ENST00000544151 ZNF326Q5BKZ1 582 aaKnown RBP23.45■■□□□ 1.34
LDHB-210ENST00000544151 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
LDHB-210ENST00000544151 PIAS4Q8N2W9 510 aaPredicted RBP23.44■■□□□ 1.34
LDHB-210ENST00000544151 HSPA1LP34931 641 aa23.4■■□□□ 1.34
LDHB-210ENST00000544151 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
LDHB-210ENST00000544151 RBM33Q96EV2 1170 aaKnown RBP23.39■■□□□ 1.33
LDHB-210ENST00000544151 TBX22Q9Y458 520 aa23.39■■□□□ 1.33
LDHB-210ENST00000544151 PPLO60437 1756 aa23.39■■□□□ 1.33
LDHB-210ENST00000544151 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
LDHB-210ENST00000544151 XRN1Q8IZH2 1706 aaKnown RBP23.37■■□□□ 1.33
LDHB-210ENST00000544151 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
LDHB-210ENST00000544151 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
LDHB-210ENST00000544151 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
LDHB-210ENST00000544151 MSH6P52701 1360 aa23.35■■□□□ 1.33
LDHB-210ENST00000544151 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.32
LDHB-210ENST00000544151 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.32
LDHB-210ENST00000544151 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
LDHB-210ENST00000544151 IFT172Q9UG01 1749 aa23.3■■□□□ 1.32
LDHB-210ENST00000544151 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
LDHB-210ENST00000544151 MPHOSPH9Q99550 1183 aa23.3■■□□□ 1.32
LDHB-210ENST00000544151 MED1Q15648 1581 aaPredicted RBP23.3■■□□□ 1.32
LDHB-210ENST00000544151 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
LDHB-210ENST00000544151 NCOA3Q9Y6Q9 1424 aa23.27■■□□□ 1.32
LDHB-210ENST00000544151 METP08581 1390 aa23.27■■□□□ 1.31
LDHB-210ENST00000544151 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
LDHB-210ENST00000544151 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
LDHB-210ENST00000544151 AMOTL2Q9Y2J4 779 aa23.26■■□□□ 1.31
LDHB-210ENST00000544151 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
LDHB-210ENST00000544151 RPGRIP1LQ68CZ1 1315 aa23.23■■□□□ 1.31
LDHB-210ENST00000544151 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
LDHB-210ENST00000544151 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
LDHB-210ENST00000544151 VGFO15240 615 aaPredicted RBP23.22■■□□□ 1.31
LDHB-210ENST00000544151 SPATA31E1Q6ZUB1 1445 aa23.22■■□□□ 1.31
LDHB-210ENST00000544151 DCCP43146 1447 aa23.16■■□□□ 1.3
LDHB-210ENST00000544151 RGL3Q3MIN7 710 aa23.16■■□□□ 1.3
LDHB-210ENST00000544151 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
LDHB-210ENST00000544151 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
LDHB-210ENST00000544151 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
LDHB-210ENST00000544151 ATF3P18847 181 aa23.15■■□□□ 1.3
LDHB-210ENST00000544151 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
LDHB-210ENST00000544151 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
LDHB-210ENST00000544151 ANKRD30BQ9BXX2 1392 aa23.14■■□□□ 1.29
LDHB-210ENST00000544151 COL16A1Q07092 1604 aaPredicted RBP23.13■■□□□ 1.29
LDHB-210ENST00000544151 ILDR2Q71H61 639 aa23.13■■□□□ 1.29
LDHB-210ENST00000544151 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
LDHB-210ENST00000544151 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
LDHB-210ENST00000544151 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
LDHB-210ENST00000544151 PIK3C2GO75747 1445 aa23.1■■□□□ 1.29
LDHB-210ENST00000544151 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
LDHB-210ENST00000544151 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
LDHB-210ENST00000544151 ROBO2Q9HCK4 1378 aa23.09■■□□□ 1.29
LDHB-210ENST00000544151 MST1RQ04912 1400 aa23.08■■□□□ 1.29
LDHB-210ENST00000544151 LAMC1P11047 1609 aa23.08■■□□□ 1.29
LDHB-210ENST00000544151 MYOM2P54296 1465 aa23.07■■□□□ 1.28
LDHB-210ENST00000544151 NHSL1Q5SYE7 1610 aa23.06■■□□□ 1.28
LDHB-210ENST00000544151 NRXN1Q9ULB1 1477 aa23.03■■□□□ 1.28
LDHB-210ENST00000544151 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
LDHB-210ENST00000544151 HRCP23327 699 aa23.02■■□□□ 1.28
LDHB-210ENST00000544151 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
LDHB-210ENST00000544151 CDC42BPGQ6DT37 1551 aa23.01■■□□□ 1.27
LDHB-210ENST00000544151 JCADQ9P266 1359 aa23.01■■□□□ 1.27
LDHB-210ENST00000544151 TECPR2O15040 1411 aa23■■□□□ 1.27
LDHB-210ENST00000544151 LRPPRCP42704 1394 aaKnown RBP22.98■■□□□ 1.27
LDHB-210ENST00000544151 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
LDHB-210ENST00000544151 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
LDHB-210ENST00000544151 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
LDHB-210ENST00000544151 STK26Q9P289 416 aa22.96■■□□□ 1.27
LDHB-210ENST00000544151 ABCC11Q96J66 1382 aa22.93■■□□□ 1.26
LDHB-210ENST00000544151 FMN2Q9NZ56 1722 aa22.91■■□□□ 1.26
LDHB-210ENST00000544151 PLEKHH1Q9ULM0 1364 aa22.91■■□□□ 1.26
LDHB-210ENST00000544151 LRP6O75581 1613 aa22.91■■□□□ 1.26
LDHB-210ENST00000544151 SOCS7O14512 581 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms