RNA–Protein interactions for RNA: ENST00000543678.1

MTFMT-202, Transcript of mitochondrial methionyl-tRNA formyltransferase, humanhuman

TSL 2

Gene MTFMT, Length 1,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTFMT-202ENST00000543678 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
MTFMT-202ENST00000543678 NWD1Q149M9 1564 aa29.19■■■□□ 2.26
MTFMT-202ENST00000543678 SLC26A8Q96RN1 970 aa29.19■■■□□ 2.26
MTFMT-202ENST00000543678 RIMS2Q9UQ26 1411 aa29.19■■■□□ 2.26
MTFMT-202ENST00000543678 CHD2O14647 1828 aaKnown RBP29.17■■■□□ 2.26
MTFMT-202ENST00000543678 NAIPQ13075 1403 aa29.17■■■□□ 2.26
MTFMT-202ENST00000543678 HSPA1LP34931 641 aa29.16■■■□□ 2.26
MTFMT-202ENST00000543678 CHGAP10645 457 aaKnown RBP29.14■■■□□ 2.26
MTFMT-202ENST00000543678 PLEKHG1Q9ULL1 1385 aa29.12■■■□□ 2.25
MTFMT-202ENST00000543678 CLTCL1P53675 1640 aa29.1■■■□□ 2.25
MTFMT-202ENST00000543678 NUTM2DQ5VT03 806 aaPredicted RBP29.08■■■□□ 2.25
MTFMT-202ENST00000543678 BCANQ96GW7 911 aa29.08■■■□□ 2.25
MTFMT-202ENST00000543678 NKTRP30414 1462 aaKnown RBP29.08■■■□□ 2.25
MTFMT-202ENST00000543678 PPP1R15AO75807 674 aaPredicted RBP29.07■■■□□ 2.24
MTFMT-202ENST00000543678 KCNA6P17658 529 aa29.07■■■□□ 2.24
MTFMT-202ENST00000543678 TMEM94Q12767 1356 aa29.07■■■□□ 2.24
MTFMT-202ENST00000543678 ILDR2Q71H61 639 aa29.06■■■□□ 2.24
MTFMT-202ENST00000543678 RBM33Q96EV2 1170 aaKnown RBP29.06■■■□□ 2.24
MTFMT-202ENST00000543678 MED1Q15648 1581 aaPredicted RBP29.05■■■□□ 2.24
MTFMT-202ENST00000543678 HFM1A2PYH4 1435 aa29.05■■■□□ 2.24
MTFMT-202ENST00000543678 KIF1BO60333 1816 aa29.04■■■□□ 2.24
MTFMT-202ENST00000543678 TRPM2O94759 1503 aa29.04■■■□□ 2.24
MTFMT-202ENST00000543678 NRXN3Q9Y4C0 1643 aa29.03■■■□□ 2.24
MTFMT-202ENST00000543678 DIP2AQ14689 1571 aa29.03■■■□□ 2.24
MTFMT-202ENST00000543678 ADAMTS13Q76LX8 1427 aa29.03■■■□□ 2.24
MTFMT-202ENST00000543678 PROSER2Q86WR7 435 aaPredicted RBP28.99■■■□□ 2.23
MTFMT-202ENST00000543678 ROBO1Q9Y6N7 1651 aa28.99■■■□□ 2.23
MTFMT-202ENST00000543678 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.98■■■□□ 2.23
MTFMT-202ENST00000543678 HDGFP51858 240 aaKnown RBP28.97■■■□□ 2.23
MTFMT-202ENST00000543678 NEXMIFQ5QGS0 1516 aa28.94■■■□□ 2.22
MTFMT-202ENST00000543678 TBX22Q9Y458 520 aa28.93■■■□□ 2.22
MTFMT-202ENST00000543678 SETBP1Q9Y6X0 1596 aa28.92■■■□□ 2.22
MTFMT-202ENST00000543678 TRIM52Q96A61 297 aa28.91■■■□□ 2.22
MTFMT-202ENST00000543678 XRN1Q8IZH2 1706 aaKnown RBP28.91■■■□□ 2.22
MTFMT-202ENST00000543678 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.89■■■□□ 2.21
MTFMT-202ENST00000543678 PTPRUQ92729 1446 aa28.88■■■□□ 2.21
MTFMT-202ENST00000543678 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
MTFMT-202ENST00000543678 MSH6P52701 1360 aa28.87■■■□□ 2.21
MTFMT-202ENST00000543678 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
MTFMT-202ENST00000543678 PIK3R4Q99570 1358 aa28.85■■■□□ 2.21
MTFMT-202ENST00000543678 SETD1AO15047 1707 aaKnown RBP28.84■■■□□ 2.21
MTFMT-202ENST00000543678 PPLO60437 1756 aa28.84■■■□□ 2.21
MTFMT-202ENST00000543678 PHLPP1O60346 1717 aa28.83■■■□□ 2.21
MTFMT-202ENST00000543678 SLC4A1APQ9BWU0 796 aaKnown RBP28.82■■■□□ 2.2
MTFMT-202ENST00000543678 FOXD1Q16676 465 aa28.78■■■□□ 2.2
MTFMT-202ENST00000543678 METP08581 1390 aa28.77■■■□□ 2.2
MTFMT-202ENST00000543678 AMOTL2Q9Y2J4 779 aa28.77■■■□□ 2.2
MTFMT-202ENST00000543678 NCOA3Q9Y6Q9 1424 aa28.76■■■□□ 2.19
MTFMT-202ENST00000543678 NALCNQ8IZF0 1738 aa28.74■■■□□ 2.19
MTFMT-202ENST00000543678 C14orf37Q86TY3 774 aa28.74■■■□□ 2.19
MTFMT-202ENST00000543678 SLAIN2Q9P270 581 aa28.73■■■□□ 2.19
MTFMT-202ENST00000543678 IFT172Q9UG01 1749 aa28.73■■■□□ 2.19
MTFMT-202ENST00000543678 SOCS7O14512 581 aa28.72■■■□□ 2.19
MTFMT-202ENST00000543678 COL16A1Q07092 1604 aaPredicted RBP28.72■■■□□ 2.19
MTFMT-202ENST00000543678 PHF23Q9BUL5 403 aaPredicted RBP28.67■■■□□ 2.18
MTFMT-202ENST00000543678 C19orf44Q9H6X5 657 aa28.65■■■□□ 2.18
MTFMT-202ENST00000543678 MPHOSPH9Q99550 1183 aa28.64■■■□□ 2.18
MTFMT-202ENST00000543678 AHDC1Q5TGY3 1603 aaPredicted RBP28.64■■■□□ 2.18
MTFMT-202ENST00000543678 CCDC144AA2RUR9 1427 aa28.63■■■□□ 2.17
MTFMT-202ENST00000543678 ATF3P18847 181 aa28.62■■■□□ 2.17
MTFMT-202ENST00000543678 DCCP43146 1447 aa28.61■■■□□ 2.17
MTFMT-202ENST00000543678 SETD5Q9C0A6 1442 aa28.61■■■□□ 2.17
MTFMT-202ENST00000543678 CADPS2Q86UW7 1296 aa28.61■■■□□ 2.17
MTFMT-202ENST00000543678 SPATA31E1Q6ZUB1 1445 aa28.6■■■□□ 2.17
MTFMT-202ENST00000543678 VGFO15240 615 aaPredicted RBP28.59■■■□□ 2.17
MTFMT-202ENST00000543678 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
MTFMT-202ENST00000543678 NHSL1Q5SYE7 1610 aa28.58■■■□□ 2.17
MTFMT-202ENST00000543678 RPGRIP1LQ68CZ1 1315 aa28.58■■■□□ 2.17
MTFMT-202ENST00000543678 MST1RQ04912 1400 aa28.58■■■□□ 2.17
MTFMT-202ENST00000543678 ASXL1Q8IXJ9 1541 aa28.57■■■□□ 2.16
MTFMT-202ENST00000543678 SHPRHQ149N8 1683 aa28.57■■■□□ 2.16
MTFMT-202ENST00000543678 PTCH1Q13635 1447 aa28.56■■■□□ 2.16
MTFMT-202ENST00000543678 RGS17Q9UGC6 210 aaPredicted RBP28.55■■■□□ 2.16
MTFMT-202ENST00000543678 RAB3GAP2Q9H2M9 1393 aa28.54■■■□□ 2.16
MTFMT-202ENST00000543678 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
MTFMT-202ENST00000543678 JCADQ9P266 1359 aa28.52■■■□□ 2.16
MTFMT-202ENST00000543678 ADGRF5Q8IZF2 1346 aa28.52■■■□□ 2.16
MTFMT-202ENST00000543678 RGL3Q3MIN7 710 aa28.52■■■□□ 2.16
MTFMT-202ENST00000543678 BRINP3Q76B58 766 aa28.52■■■□□ 2.16
MTFMT-202ENST00000543678 PRAG1Q86YV5 1406 aa28.52■■■□□ 2.16
MTFMT-202ENST00000543678 LRP6O75581 1613 aa28.49■■■□□ 2.15
MTFMT-202ENST00000543678 KNDC1Q76NI1 1749 aa28.49■■■□□ 2.15
MTFMT-202ENST00000543678 ANKRD30BQ9BXX2 1392 aa28.44■■■□□ 2.14
MTFMT-202ENST00000543678 PIK3C2GO75747 1445 aa28.43■■■□□ 2.14
MTFMT-202ENST00000543678 C1orf167Q5SNV9 1468 aa28.41■■■□□ 2.14
MTFMT-202ENST00000543678 LAMC1P11047 1609 aa28.41■■■□□ 2.14
MTFMT-202ENST00000543678 DDX17Q92841 729 aaKnown RBP28.4■■■□□ 2.14
MTFMT-202ENST00000543678 CDC42BPGQ6DT37 1551 aa28.4■■■□□ 2.14
MTFMT-202ENST00000543678 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
MTFMT-202ENST00000543678 ACIN1Q9UKV3 1341 aaKnown RBP28.38■■■□□ 2.13
MTFMT-202ENST00000543678 SPATA31A6Q5VVP1 1343 aa28.36■■■□□ 2.13
MTFMT-202ENST00000543678 TECPR2O15040 1411 aa28.35■■■□□ 2.13
MTFMT-202ENST00000543678 MYOM2P54296 1465 aa28.35■■■□□ 2.13
MTFMT-202ENST00000543678 NRXN1Q9ULB1 1477 aa28.35■■■□□ 2.13
MTFMT-202ENST00000543678 STK26Q9P289 416 aa28.35■■■□□ 2.13
MTFMT-202ENST00000543678 TMEM132EQ6IEE7 984 aa28.34■■■□□ 2.13
MTFMT-202ENST00000543678 LRPPRCP42704 1394 aaKnown RBP28.34■■■□□ 2.13
MTFMT-202ENST00000543678 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
MTFMT-202ENST00000543678 PLEKHH1Q9ULM0 1364 aa28.31■■■□□ 2.12
MTFMT-202ENST00000543678 YTHDC2Q9H6S0 1430 aaKnown RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms