RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 PPP1R15AO75807 674 aaPredicted RBP21.48■■□□□ 1.03
VPS37B-204ENST00000543590 BCANQ96GW7 911 aa21.48■■□□□ 1.03
VPS37B-204ENST00000543590 SPHKAPQ2M3C7 1700 aa21.47■■□□□ 1.03
VPS37B-204ENST00000543590 TOM1O60784 492 aa21.47■■□□□ 1.03
VPS37B-204ENST00000543590 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.47■■□□□ 1.03
VPS37B-204ENST00000543590 PLEKHG1Q9ULL1 1385 aa21.47■■□□□ 1.03
VPS37B-204ENST00000543590 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.03
VPS37B-204ENST00000543590 KCNA6P17658 529 aa21.45■■□□□ 1.02
VPS37B-204ENST00000543590 NUTM2DQ5VT03 806 aaPredicted RBP21.44■■□□□ 1.02
VPS37B-204ENST00000543590 PIP4K2BP78356 416 aa21.43■■□□□ 1.02
VPS37B-204ENST00000543590 SLC4A1APQ9BWU0 796 aaKnown RBP21.43■■□□□ 1.02
VPS37B-204ENST00000543590 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
VPS37B-204ENST00000543590 TRPM2O94759 1503 aa21.41■■□□□ 1.02
VPS37B-204ENST00000543590 ALKQ9UM73 1620 aa21.4■■□□□ 1.02
VPS37B-204ENST00000543590 TBX22Q9Y458 520 aa21.39■■□□□ 1.02
VPS37B-204ENST00000543590 CLTCL1P53675 1640 aa21.38■■□□□ 1.01
VPS37B-204ENST00000543590 ZNF326Q5BKZ1 582 aaKnown RBP21.38■■□□□ 1.01
VPS37B-204ENST00000543590 PROSER2Q86WR7 435 aaPredicted RBP21.37■■□□□ 1.01
VPS37B-204ENST00000543590 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
VPS37B-204ENST00000543590 NWD1Q149M9 1564 aa21.36■■□□□ 1.01
VPS37B-204ENST00000543590 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
VPS37B-204ENST00000543590 TMEM94Q12767 1356 aa21.36■■□□□ 1.01
VPS37B-204ENST00000543590 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
VPS37B-204ENST00000543590 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
VPS37B-204ENST00000543590 HSPA1LP34931 641 aa21.32■■□□□ 1
VPS37B-204ENST00000543590 CHD2O14647 1828 aaKnown RBP21.32■■□□□ 1
VPS37B-204ENST00000543590 FOXD1Q16676 465 aa21.32■■□□□ 1
VPS37B-204ENST00000543590 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
VPS37B-204ENST00000543590 SETD5Q9C0A6 1442 aa21.32■■□□□ 1
VPS37B-204ENST00000543590 DIP2AQ14689 1571 aa21.31■■□□□ 1
VPS37B-204ENST00000543590 KIF1BO60333 1816 aa21.31■■□□□ 1
VPS37B-204ENST00000543590 PIK3R4Q99570 1358 aa21.3■■□□□ 1
VPS37B-204ENST00000543590 ACIN1Q9UKV3 1341 aaKnown RBP21.29■■□□□ 1
VPS37B-204ENST00000543590 NEXMIFQ5QGS0 1516 aa21.28■■□□□ 1
VPS37B-204ENST00000543590 SETBP1Q9Y6X0 1596 aa21.27■■□□□ 1
VPS37B-204ENST00000543590 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
VPS37B-204ENST00000543590 MSH6P52701 1360 aa21.24■□□□□ 0.99
VPS37B-204ENST00000543590 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
VPS37B-204ENST00000543590 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
VPS37B-204ENST00000543590 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
VPS37B-204ENST00000543590 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
VPS37B-204ENST00000543590 RPGRIP1LQ68CZ1 1315 aa21.23■□□□□ 0.99
VPS37B-204ENST00000543590 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
VPS37B-204ENST00000543590 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
VPS37B-204ENST00000543590 NCOA3Q9Y6Q9 1424 aa21.21■□□□□ 0.99
VPS37B-204ENST00000543590 METP08581 1390 aa21.21■□□□□ 0.99
VPS37B-204ENST00000543590 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
VPS37B-204ENST00000543590 C14orf37Q86TY3 774 aa21.19■□□□□ 0.98
VPS37B-204ENST00000543590 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
VPS37B-204ENST00000543590 XRN1Q8IZH2 1706 aaKnown RBP21.16■□□□□ 0.98
VPS37B-204ENST00000543590 SLAIN2Q9P270 581 aa21.16■□□□□ 0.98
VPS37B-204ENST00000543590 PPLO60437 1756 aa21.15■□□□□ 0.98
VPS37B-204ENST00000543590 SPATA31E1Q6ZUB1 1445 aa21.15■□□□□ 0.98
VPS37B-204ENST00000543590 C19orf44Q9H6X5 657 aa21.15■□□□□ 0.98
VPS37B-204ENST00000543590 ROBO1Q9Y6N7 1651 aa21.13■□□□□ 0.97
VPS37B-204ENST00000543590 HRCP23327 699 aa21.12■□□□□ 0.97
VPS37B-204ENST00000543590 CADPS2Q86UW7 1296 aa21.12■□□□□ 0.97
VPS37B-204ENST00000543590 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
VPS37B-204ENST00000543590 ATF3P18847 181 aa21.11■□□□□ 0.97
VPS37B-204ENST00000543590 ADGRF5Q8IZF2 1346 aa21.1■□□□□ 0.97
VPS37B-204ENST00000543590 SETD1AO15047 1707 aaKnown RBP21.1■□□□□ 0.97
VPS37B-204ENST00000543590 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
VPS37B-204ENST00000543590 MED1Q15648 1581 aaPredicted RBP21.08■□□□□ 0.97
VPS37B-204ENST00000543590 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
VPS37B-204ENST00000543590 DCCP43146 1447 aa21.06■□□□□ 0.96
VPS37B-204ENST00000543590 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
VPS37B-204ENST00000543590 PTCH1Q13635 1447 aa21.04■□□□□ 0.96
VPS37B-204ENST00000543590 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
VPS37B-204ENST00000543590 ADGRL3Q9HAR2 1447 aa21.03■□□□□ 0.96
VPS37B-204ENST00000543590 PRAG1Q86YV5 1406 aa21.02■□□□□ 0.96
VPS37B-204ENST00000543590 PIK3C2GO75747 1445 aa21.01■□□□□ 0.95
VPS37B-204ENST00000543590 PHLPP1O60346 1717 aa20.99■□□□□ 0.95
VPS37B-204ENST00000543590 NALCNQ8IZF0 1738 aa20.99■□□□□ 0.95
VPS37B-204ENST00000543590 MST1RQ04912 1400 aa20.99■□□□□ 0.95
VPS37B-204ENST00000543590 BRINP3Q76B58 766 aa20.99■□□□□ 0.95
VPS37B-204ENST00000543590 TMEM132EQ6IEE7 984 aa20.97■□□□□ 0.95
VPS37B-204ENST00000543590 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
VPS37B-204ENST00000543590 STK26Q9P289 416 aa20.96■□□□□ 0.95
VPS37B-204ENST00000543590 MYOM2P54296 1465 aa20.96■□□□□ 0.95
VPS37B-204ENST00000543590 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.94
VPS37B-204ENST00000543590 LRPPRCP42704 1394 aaKnown RBP20.95■□□□□ 0.94
VPS37B-204ENST00000543590 NRXN1Q9ULB1 1477 aa20.95■□□□□ 0.94
VPS37B-204ENST00000543590 ASXL1Q8IXJ9 1541 aa20.95■□□□□ 0.94
VPS37B-204ENST00000543590 COL16A1Q07092 1604 aaPredicted RBP20.94■□□□□ 0.94
VPS37B-204ENST00000543590 AHDC1Q5TGY3 1603 aaPredicted RBP20.94■□□□□ 0.94
VPS37B-204ENST00000543590 ABCC11Q96J66 1382 aa20.94■□□□□ 0.94
VPS37B-204ENST00000543590 JCADQ9P266 1359 aa20.94■□□□□ 0.94
VPS37B-204ENST00000543590 TECPR2O15040 1411 aa20.93■□□□□ 0.94
VPS37B-204ENST00000543590 CFAP70Q5T0N1 1121 aa20.92■□□□□ 0.94
VPS37B-204ENST00000543590 WAPLQ7Z5K2 1190 aa20.91■□□□□ 0.94
VPS37B-204ENST00000543590 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
VPS37B-204ENST00000543590 C1orf167Q5SNV9 1468 aa20.9■□□□□ 0.94
VPS37B-204ENST00000543590 DCAF11Q8TEB1 546 aa20.89■□□□□ 0.94
VPS37B-204ENST00000543590 KDM2AQ9Y2K7 1162 aa20.88■□□□□ 0.93
VPS37B-204ENST00000543590 LAMC1P11047 1609 aa20.88■□□□□ 0.93
VPS37B-204ENST00000543590 KNDC1Q76NI1 1749 aa20.88■□□□□ 0.93
VPS37B-204ENST00000543590 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
VPS37B-204ENST00000543590 SOCS7O14512 581 aa20.87■□□□□ 0.93
VPS37B-204ENST00000543590 PLEKHH1Q9ULM0 1364 aa20.86■□□□□ 0.93
VPS37B-204ENST00000543590 DDX17Q92841 729 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms