RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CCER1Q8TC90 406 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-217ENST00000543537 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
COPS7A-217ENST00000543537 HFM1A2PYH4 1435 aa16.91■□□□□ 0.3
COPS7A-217ENST00000543537 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
COPS7A-217ENST00000543537 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
COPS7A-217ENST00000543537 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.29
COPS7A-217ENST00000543537 KCNA6P17658 529 aa16.89■□□□□ 0.29
COPS7A-217ENST00000543537 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
COPS7A-217ENST00000543537 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
COPS7A-217ENST00000543537 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
COPS7A-217ENST00000543537 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
COPS7A-217ENST00000543537 SLC26A8Q96RN1 970 aa16.85■□□□□ 0.29
COPS7A-217ENST00000543537 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
COPS7A-217ENST00000543537 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
COPS7A-217ENST00000543537 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
COPS7A-217ENST00000543537 DIP2AQ14689 1571 aa16.82■□□□□ 0.28
COPS7A-217ENST00000543537 TRPM2O94759 1503 aa16.82■□□□□ 0.28
COPS7A-217ENST00000543537 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
COPS7A-217ENST00000543537 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
COPS7A-217ENST00000543537 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
COPS7A-217ENST00000543537 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
COPS7A-217ENST00000543537 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
COPS7A-217ENST00000543537 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
COPS7A-217ENST00000543537 HSPA1LP34931 641 aa16.8■□□□□ 0.28
COPS7A-217ENST00000543537 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
COPS7A-217ENST00000543537 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
COPS7A-217ENST00000543537 CHGAP10645 457 aaKnown RBP16.79■□□□□ 0.28
COPS7A-217ENST00000543537 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
COPS7A-217ENST00000543537 FAM135BQ49AJ0 1406 aa16.78■□□□□ 0.28
COPS7A-217ENST00000543537 PROSER2Q86WR7 435 aaPredicted RBP16.77■□□□□ 0.28
COPS7A-217ENST00000543537 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
COPS7A-217ENST00000543537 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
COPS7A-217ENST00000543537 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
COPS7A-217ENST00000543537 BCANQ96GW7 911 aa16.75■□□□□ 0.27
COPS7A-217ENST00000543537 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
COPS7A-217ENST00000543537 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
COPS7A-217ENST00000543537 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
COPS7A-217ENST00000543537 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
COPS7A-217ENST00000543537 MSH6P52701 1360 aa16.72■□□□□ 0.27
COPS7A-217ENST00000543537 NUTM2DQ5VT03 806 aaPredicted RBP16.71■□□□□ 0.27
COPS7A-217ENST00000543537 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
COPS7A-217ENST00000543537 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
COPS7A-217ENST00000543537 KIF1BO60333 1816 aa16.69■□□□□ 0.26
COPS7A-217ENST00000543537 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
COPS7A-217ENST00000543537 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
COPS7A-217ENST00000543537 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
COPS7A-217ENST00000543537 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
COPS7A-217ENST00000543537 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
COPS7A-217ENST00000543537 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
COPS7A-217ENST00000543537 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
COPS7A-217ENST00000543537 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
COPS7A-217ENST00000543537 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
COPS7A-217ENST00000543537 DCCP43146 1447 aa16.65■□□□□ 0.26
COPS7A-217ENST00000543537 PRAG1Q86YV5 1406 aa16.65■□□□□ 0.26
COPS7A-217ENST00000543537 VGFO15240 615 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-217ENST00000543537 MPHOSPH9Q99550 1183 aa16.65■□□□□ 0.26
COPS7A-217ENST00000543537 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
COPS7A-217ENST00000543537 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
COPS7A-217ENST00000543537 METP08581 1390 aa16.64■□□□□ 0.26
COPS7A-217ENST00000543537 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
COPS7A-217ENST00000543537 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
COPS7A-217ENST00000543537 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-217ENST00000543537 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
COPS7A-217ENST00000543537 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
COPS7A-217ENST00000543537 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
COPS7A-217ENST00000543537 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
COPS7A-217ENST00000543537 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
COPS7A-217ENST00000543537 PPLO60437 1756 aa16.59■□□□□ 0.25
COPS7A-217ENST00000543537 SOCS7O14512 581 aa16.59■□□□□ 0.25
COPS7A-217ENST00000543537 FOXD1Q16676 465 aa16.59■□□□□ 0.25
COPS7A-217ENST00000543537 ATF3P18847 181 aa16.58■□□□□ 0.24
COPS7A-217ENST00000543537 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
COPS7A-217ENST00000543537 ANKRD30BQ9BXX2 1392 aa16.57■□□□□ 0.24
COPS7A-217ENST00000543537 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
COPS7A-217ENST00000543537 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-217ENST00000543537 MST1RQ04912 1400 aa16.53■□□□□ 0.24
COPS7A-217ENST00000543537 JCADQ9P266 1359 aa16.53■□□□□ 0.24
COPS7A-217ENST00000543537 COL16A1Q07092 1604 aaPredicted RBP16.53■□□□□ 0.24
COPS7A-217ENST00000543537 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
COPS7A-217ENST00000543537 BRINP3Q76B58 766 aa16.52■□□□□ 0.24
COPS7A-217ENST00000543537 PHLPP1O60346 1717 aa16.52■□□□□ 0.24
COPS7A-217ENST00000543537 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
COPS7A-217ENST00000543537 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
COPS7A-217ENST00000543537 TECPR2O15040 1411 aa16.51■□□□□ 0.23
COPS7A-217ENST00000543537 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
COPS7A-217ENST00000543537 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
COPS7A-217ENST00000543537 NALCNQ8IZF0 1738 aa16.49■□□□□ 0.23
COPS7A-217ENST00000543537 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
COPS7A-217ENST00000543537 ASXL1Q8IXJ9 1541 aa16.49■□□□□ 0.23
COPS7A-217ENST00000543537 RGL3Q3MIN7 710 aa16.48■□□□□ 0.23
COPS7A-217ENST00000543537 RGS17Q9UGC6 210 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-217ENST00000543537 ABCC11Q96J66 1382 aa16.48■□□□□ 0.23
COPS7A-217ENST00000543537 MYOM2P54296 1465 aa16.48■□□□□ 0.23
COPS7A-217ENST00000543537 LRPPRCP42704 1394 aaKnown RBP16.47■□□□□ 0.23
COPS7A-217ENST00000543537 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
COPS7A-217ENST00000543537 LAMC1P11047 1609 aa16.45■□□□□ 0.22
COPS7A-217ENST00000543537 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
COPS7A-217ENST00000543537 C1orf167Q5SNV9 1468 aa16.45■□□□□ 0.22
COPS7A-217ENST00000543537 SHPRHQ149N8 1683 aa16.44■□□□□ 0.22
COPS7A-217ENST00000543537 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms