RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 RIMS2Q9UQ26 1411 aa24.25■■□□□ 1.47
CIT-212ENST00000543239 CLTCL1P53675 1640 aa24.23■■□□□ 1.47
CIT-212ENST00000543239 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
CIT-212ENST00000543239 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
CIT-212ENST00000543239 PLEKHG1Q9ULL1 1385 aa24.2■■□□□ 1.46
CIT-212ENST00000543239 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
CIT-212ENST00000543239 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
CIT-212ENST00000543239 KIF1BO60333 1816 aa24.16■■□□□ 1.46
CIT-212ENST00000543239 STRCP1A6NGW2 1772 aa24.14■■□□□ 1.46
CIT-212ENST00000543239 HRCP23327 699 aa24.14■■□□□ 1.45
CIT-212ENST00000543239 FOXD1Q16676 465 aa24.12■■□□□ 1.45
CIT-212ENST00000543239 SLC26A8Q96RN1 970 aa24.12■■□□□ 1.45
CIT-212ENST00000543239 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
CIT-212ENST00000543239 BCANQ96GW7 911 aa24.11■■□□□ 1.45
CIT-212ENST00000543239 DIP2AQ14689 1571 aa24.1■■□□□ 1.45
CIT-212ENST00000543239 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
CIT-212ENST00000543239 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
CIT-212ENST00000543239 NEXMIFQ5QGS0 1516 aa24.09■■□□□ 1.45
CIT-212ENST00000543239 NUTM2DQ5VT03 806 aaPredicted RBP24.08■■□□□ 1.45
CIT-212ENST00000543239 NWD1Q149M9 1564 aa24.08■■□□□ 1.44
CIT-212ENST00000543239 KCNA6P17658 529 aa24.07■■□□□ 1.44
CIT-212ENST00000543239 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
CIT-212ENST00000543239 ADAMTS13Q76LX8 1427 aa24.07■■□□□ 1.44
CIT-212ENST00000543239 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
CIT-212ENST00000543239 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
CIT-212ENST00000543239 RPGRIP1LQ68CZ1 1315 aa24.04■■□□□ 1.44
CIT-212ENST00000543239 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
CIT-212ENST00000543239 UBAP1LF5GYI3 381 aa24.02■■□□□ 1.44
CIT-212ENST00000543239 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
CIT-212ENST00000543239 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
CIT-212ENST00000543239 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
CIT-212ENST00000543239 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
CIT-212ENST00000543239 VGFO15240 615 aaPredicted RBP23.99■■□□□ 1.43
CIT-212ENST00000543239 TOM1O60784 492 aa23.98■■□□□ 1.43
CIT-212ENST00000543239 PPLO60437 1756 aa23.98■■□□□ 1.43
CIT-212ENST00000543239 XIRP1Q702N8 1843 aaKnown RBP23.96■■□□□ 1.43
CIT-212ENST00000543239 TMEM94Q12767 1356 aa23.95■■□□□ 1.42
CIT-212ENST00000543239 PROSER2Q86WR7 435 aaPredicted RBP23.94■■□□□ 1.42
CIT-212ENST00000543239 ANKRD30BQ9BXX2 1392 aa23.93■■□□□ 1.42
CIT-212ENST00000543239 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
CIT-212ENST00000543239 IFT172Q9UG01 1749 aa23.91■■□□□ 1.42
CIT-212ENST00000543239 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
CIT-212ENST00000543239 PTPRUQ92729 1446 aa23.9■■□□□ 1.42
CIT-212ENST00000543239 NCOA3Q9Y6Q9 1424 aa23.9■■□□□ 1.42
CIT-212ENST00000543239 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
CIT-212ENST00000543239 METP08581 1390 aa23.89■■□□□ 1.41
CIT-212ENST00000543239 AMOTL2Q9Y2J4 779 aa23.88■■□□□ 1.41
CIT-212ENST00000543239 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
CIT-212ENST00000543239 MSH6P52701 1360 aa23.84■■□□□ 1.41
CIT-212ENST00000543239 PIP4K2BP78356 416 aa23.84■■□□□ 1.41
CIT-212ENST00000543239 ADGRF5Q8IZF2 1346 aa23.84■■□□□ 1.41
CIT-212ENST00000543239 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
CIT-212ENST00000543239 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
CIT-212ENST00000543239 MYOM2P54296 1465 aa23.82■■□□□ 1.4
CIT-212ENST00000543239 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
CIT-212ENST00000543239 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
CIT-212ENST00000543239 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
CIT-212ENST00000543239 NRXN1Q9ULB1 1477 aa23.8■■□□□ 1.4
CIT-212ENST00000543239 PTCH1Q13635 1447 aa23.77■■□□□ 1.4
CIT-212ENST00000543239 C14orf37Q86TY3 774 aa23.76■■□□□ 1.39
CIT-212ENST00000543239 C19orf44Q9H6X5 657 aa23.75■■□□□ 1.39
CIT-212ENST00000543239 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
CIT-212ENST00000543239 LAMC1P11047 1609 aa23.74■■□□□ 1.39
CIT-212ENST00000543239 DCCP43146 1447 aa23.74■■□□□ 1.39
CIT-212ENST00000543239 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
CIT-212ENST00000543239 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
CIT-212ENST00000543239 HSPA1LP34931 641 aa23.72■■□□□ 1.39
CIT-212ENST00000543239 CADPS2Q86UW7 1296 aa23.71■■□□□ 1.39
CIT-212ENST00000543239 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.38
CIT-212ENST00000543239 ADGRL3Q9HAR2 1447 aa23.7■■□□□ 1.38
CIT-212ENST00000543239 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
CIT-212ENST00000543239 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
CIT-212ENST00000543239 SLAIN2Q9P270 581 aa23.7■■□□□ 1.38
CIT-212ENST00000543239 TECPR2O15040 1411 aa23.69■■□□□ 1.38
CIT-212ENST00000543239 ATF3P18847 181 aa23.69■■□□□ 1.38
CIT-212ENST00000543239 ROBO1Q9Y6N7 1651 aa23.69■■□□□ 1.38
CIT-212ENST00000543239 LRPPRCP42704 1394 aaKnown RBP23.68■■□□□ 1.38
CIT-212ENST00000543239 DHX57Q6P158 1386 aaKnown RBP23.68■■□□□ 1.38
CIT-212ENST00000543239 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
CIT-212ENST00000543239 KNDC1Q76NI1 1749 aa23.67■■□□□ 1.38
CIT-212ENST00000543239 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
CIT-212ENST00000543239 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
CIT-212ENST00000543239 YTHDC2Q9H6S0 1430 aaKnown RBP23.65■■□□□ 1.38
CIT-212ENST00000543239 CFAP70Q5T0N1 1121 aa23.64■■□□□ 1.37
CIT-212ENST00000543239 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
CIT-212ENST00000543239 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
CIT-212ENST00000543239 MST1RQ04912 1400 aa23.6■■□□□ 1.37
CIT-212ENST00000543239 STK26Q9P289 416 aa23.6■■□□□ 1.37
CIT-212ENST00000543239 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
CIT-212ENST00000543239 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
CIT-212ENST00000543239 CDC42BPGQ6DT37 1551 aa23.57■■□□□ 1.36
CIT-212ENST00000543239 DLC1Q96QB1 1528 aa23.55■■□□□ 1.36
CIT-212ENST00000543239 AHDC1Q5TGY3 1603 aaPredicted RBP23.54■■□□□ 1.36
CIT-212ENST00000543239 PHLPP1O60346 1717 aa23.53■■□□□ 1.36
CIT-212ENST00000543239 BRINP3Q76B58 766 aa23.53■■□□□ 1.36
CIT-212ENST00000543239 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
CIT-212ENST00000543239 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
CIT-212ENST00000543239 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CIT-212ENST00000543239 KIAA1210Q9ULL0 1709 aa23.52■■□□□ 1.36
CIT-212ENST00000543239 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms