RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
PTPN6-219ENST00000542848 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-219ENST00000542848 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
PTPN6-219ENST00000542848 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
PTPN6-219ENST00000542848 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
PTPN6-219ENST00000542848 FAM135BQ49AJ0 1406 aa18.25■□□□□ 0.51
PTPN6-219ENST00000542848 IQGAP3Q86VI3 1631 aa18.25■□□□□ 0.51
PTPN6-219ENST00000542848 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
PTPN6-219ENST00000542848 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
PTPN6-219ENST00000542848 BCANQ96GW7 911 aa18.24■□□□□ 0.51
PTPN6-219ENST00000542848 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
PTPN6-219ENST00000542848 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
PTPN6-219ENST00000542848 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
PTPN6-219ENST00000542848 RIMS2Q9UQ26 1411 aa18.22■□□□□ 0.51
PTPN6-219ENST00000542848 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
PTPN6-219ENST00000542848 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
PTPN6-219ENST00000542848 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
PTPN6-219ENST00000542848 TBX22Q9Y458 520 aa18.18■□□□□ 0.5
PTPN6-219ENST00000542848 MSH6P52701 1360 aa18.17■□□□□ 0.5
PTPN6-219ENST00000542848 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
PTPN6-219ENST00000542848 NUP155O75694 1391 aa18.16■□□□□ 0.5
PTPN6-219ENST00000542848 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
PTPN6-219ENST00000542848 SLAIN2Q9P270 581 aa18.14■□□□□ 0.49
PTPN6-219ENST00000542848 PHLPP1O60346 1717 aa18.14■□□□□ 0.49
PTPN6-219ENST00000542848 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
PTPN6-219ENST00000542848 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
PTPN6-219ENST00000542848 ITGAEP38570 1179 aa18.13■□□□□ 0.49
PTPN6-219ENST00000542848 PIK3R4Q99570 1358 aa18.12■□□□□ 0.49
PTPN6-219ENST00000542848 ADAMTS13Q76LX8 1427 aa18.12■□□□□ 0.49
PTPN6-219ENST00000542848 RGS17Q9UGC6 210 aaPredicted RBP18.11■□□□□ 0.49
PTPN6-219ENST00000542848 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.1■□□□□ 0.49
PTPN6-219ENST00000542848 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
PTPN6-219ENST00000542848 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
PTPN6-219ENST00000542848 TRPM2O94759 1503 aa18.08■□□□□ 0.49
PTPN6-219ENST00000542848 KIF1BO60333 1816 aa18.07■□□□□ 0.48
PTPN6-219ENST00000542848 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
PTPN6-219ENST00000542848 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
PTPN6-219ENST00000542848 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
PTPN6-219ENST00000542848 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
PTPN6-219ENST00000542848 NRXN3Q9Y4C0 1643 aa18.04■□□□□ 0.48
PTPN6-219ENST00000542848 JCADQ9P266 1359 aa18.04■□□□□ 0.48
PTPN6-219ENST00000542848 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
PTPN6-219ENST00000542848 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
PTPN6-219ENST00000542848 ATF3P18847 181 aa18.02■□□□□ 0.48
PTPN6-219ENST00000542848 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
PTPN6-219ENST00000542848 XRN1Q8IZH2 1706 aaKnown RBP18.01■□□□□ 0.47
PTPN6-219ENST00000542848 PTPRUQ92729 1446 aa18.01■□□□□ 0.47
PTPN6-219ENST00000542848 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
PTPN6-219ENST00000542848 POTEAQ6S8J7 498 aa18■□□□□ 0.47
PTPN6-219ENST00000542848 AHDC1Q5TGY3 1603 aaPredicted RBP18■□□□□ 0.47
PTPN6-219ENST00000542848 CLTCL1P53675 1640 aa17.99■□□□□ 0.47
PTPN6-219ENST00000542848 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
PTPN6-219ENST00000542848 NAIPQ13075 1403 aa17.98■□□□□ 0.47
PTPN6-219ENST00000542848 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
PTPN6-219ENST00000542848 DCCP43146 1447 aa17.97■□□□□ 0.47
PTPN6-219ENST00000542848 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
PTPN6-219ENST00000542848 METP08581 1390 aa17.93■□□□□ 0.46
PTPN6-219ENST00000542848 NHSL1Q5SYE7 1610 aa17.92■□□□□ 0.46
PTPN6-219ENST00000542848 BRINP3Q76B58 766 aa17.92■□□□□ 0.46
PTPN6-219ENST00000542848 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
PTPN6-219ENST00000542848 NALCNQ8IZF0 1738 aa17.9■□□□□ 0.46
PTPN6-219ENST00000542848 LRP6O75581 1613 aa17.9■□□□□ 0.46
PTPN6-219ENST00000542848 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
PTPN6-219ENST00000542848 MST1RQ04912 1400 aa17.89■□□□□ 0.46
PTPN6-219ENST00000542848 PPLO60437 1756 aa17.89■□□□□ 0.45
PTPN6-219ENST00000542848 ASXL1Q8IXJ9 1541 aa17.89■□□□□ 0.45
PTPN6-219ENST00000542848 VGFO15240 615 aaPredicted RBP17.89■□□□□ 0.45
PTPN6-219ENST00000542848 TRIM52Q96A61 297 aa17.89■□□□□ 0.45
PTPN6-219ENST00000542848 MEX3CQ5U5Q3 659 aaKnown RBP17.88■□□□□ 0.45
PTPN6-219ENST00000542848 ADGRL3Q9HAR2 1447 aa17.88■□□□□ 0.45
PTPN6-219ENST00000542848 ZNF772Q68DY9 489 aaPredicted RBP17.87■□□□□ 0.45
PTPN6-219ENST00000542848 RPGRIP1LQ68CZ1 1315 aa17.87■□□□□ 0.45
PTPN6-219ENST00000542848 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
PTPN6-219ENST00000542848 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
PTPN6-219ENST00000542848 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
PTPN6-219ENST00000542848 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
PTPN6-219ENST00000542848 LAMC1P11047 1609 aa17.82■□□□□ 0.44
PTPN6-219ENST00000542848 NUTM2BA6NNL0 878 aaPredicted RBP17.81■□□□□ 0.44
PTPN6-219ENST00000542848 NUTM2EB1AL46 878 aaPredicted RBP17.81■□□□□ 0.44
PTPN6-219ENST00000542848 NUTM2AQ8IVF1 878 aaPredicted RBP17.81■□□□□ 0.44
PTPN6-219ENST00000542848 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
PTPN6-219ENST00000542848 C1orf167Q5SNV9 1468 aa17.79■□□□□ 0.44
PTPN6-219ENST00000542848 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
PTPN6-219ENST00000542848 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
PTPN6-219ENST00000542848 RXRBP28702 533 aa17.77■□□□□ 0.44
PTPN6-219ENST00000542848 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
PTPN6-219ENST00000542848 AFF2P51816 1311 aa17.75■□□□□ 0.43
PTPN6-219ENST00000542848 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
PTPN6-219ENST00000542848 FOXD1Q16676 465 aa17.74■□□□□ 0.43
PTPN6-219ENST00000542848 CDK12Q9NYV4 1490 aaPredicted RBP17.74■□□□□ 0.43
PTPN6-219ENST00000542848 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
PTPN6-219ENST00000542848 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
PTPN6-219ENST00000542848 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
PTPN6-219ENST00000542848 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
PTPN6-219ENST00000542848 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN6-219ENST00000542848 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
PTPN6-219ENST00000542848 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.42
PTPN6-219ENST00000542848 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
PTPN6-219ENST00000542848 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
PTPN6-219ENST00000542848 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms