RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
LRTOMT-220ENST00000542846 SLC4A1APQ9BWU0 796 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-220ENST00000542846 PLEKHG1Q9ULL1 1385 aa9.37□□□□□ -0.91
LRTOMT-220ENST00000542846 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 NWD1Q149M9 1564 aa9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
LRTOMT-220ENST00000542846 NEXMIFQ5QGS0 1516 aa9.35□□□□□ -0.91
LRTOMT-220ENST00000542846 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
LRTOMT-220ENST00000542846 CHD2O14647 1828 aaKnown RBP9.34□□□□□ -0.91
LRTOMT-220ENST00000542846 PPP1R15AO75807 674 aaPredicted RBP9.34□□□□□ -0.91
LRTOMT-220ENST00000542846 MPHOSPH9Q99550 1183 aa9.34□□□□□ -0.91
LRTOMT-220ENST00000542846 SETBP1Q9Y6X0 1596 aa9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 SLC26A8Q96RN1 970 aa9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 NRXN3Q9Y4C0 1643 aa9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 NKTRP30414 1462 aaKnown RBP9.33□□□□□ -0.92
LRTOMT-220ENST00000542846 PPLO60437 1756 aa9.32□□□□□ -0.92
LRTOMT-220ENST00000542846 CCDC144AA2RUR9 1427 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 KCNA6P17658 529 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 HRCP23327 699 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 FOXD1Q16676 465 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 ZNF326Q5BKZ1 582 aaKnown RBP9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 BCANQ96GW7 911 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 TBX22Q9Y458 520 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 PIK3R4Q99570 1358 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
LRTOMT-220ENST00000542846 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
LRTOMT-220ENST00000542846 NUTM2DQ5VT03 806 aaPredicted RBP9.3□□□□□ -0.92
LRTOMT-220ENST00000542846 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
LRTOMT-220ENST00000542846 SETD1AO15047 1707 aaKnown RBP9.29□□□□□ -0.92
LRTOMT-220ENST00000542846 RPGRIP1LQ68CZ1 1315 aa9.29□□□□□ -0.92
LRTOMT-220ENST00000542846 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
LRTOMT-220ENST00000542846 TOM1O60784 492 aa9.28□□□□□ -0.92
LRTOMT-220ENST00000542846 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
LRTOMT-220ENST00000542846 SENP3Q9H4L4 574 aaPredicted RBP9.27□□□□□ -0.93
LRTOMT-220ENST00000542846 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
LRTOMT-220ENST00000542846 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
LRTOMT-220ENST00000542846 NCOA3Q9Y6Q9 1424 aa9.25□□□□□ -0.93
LRTOMT-220ENST00000542846 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
LRTOMT-220ENST00000542846 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
LRTOMT-220ENST00000542846 METP08581 1390 aa9.24□□□□□ -0.93
LRTOMT-220ENST00000542846 PRAG1Q86YV5 1406 aa9.23□□□□□ -0.93
LRTOMT-220ENST00000542846 MYOM2P54296 1465 aa9.23□□□□□ -0.93
LRTOMT-220ENST00000542846 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
LRTOMT-220ENST00000542846 MSH6P52701 1360 aa9.23□□□□□ -0.93
LRTOMT-220ENST00000542846 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 PIP4K2BP78356 416 aa9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 LAMC1P11047 1609 aa9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
LRTOMT-220ENST00000542846 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.93
LRTOMT-220ENST00000542846 KNDC1Q76NI1 1749 aa9.21□□□□□ -0.94
LRTOMT-220ENST00000542846 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
LRTOMT-220ENST00000542846 ADGRF5Q8IZF2 1346 aa9.21□□□□□ -0.94
LRTOMT-220ENST00000542846 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
LRTOMT-220ENST00000542846 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
LRTOMT-220ENST00000542846 DCCP43146 1447 aa9.2□□□□□ -0.94
LRTOMT-220ENST00000542846 FAM135BQ49AJ0 1406 aa9.2□□□□□ -0.94
LRTOMT-220ENST00000542846 HSPA1LP34931 641 aa9.19□□□□□ -0.94
LRTOMT-220ENST00000542846 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
LRTOMT-220ENST00000542846 TECPR2O15040 1411 aa9.18□□□□□ -0.94
LRTOMT-220ENST00000542846 C14orf37Q86TY3 774 aa9.18□□□□□ -0.94
LRTOMT-220ENST00000542846 C19orf44Q9H6X5 657 aa9.18□□□□□ -0.94
LRTOMT-220ENST00000542846 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
LRTOMT-220ENST00000542846 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
LRTOMT-220ENST00000542846 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 ATF3P18847 181 aa9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 TRIM26Q12899 539 aaPredicted RBP9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 STAC3Q96MF2 364 aa9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 C14orf93Q9H972 538 aaKnown RBP9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
LRTOMT-220ENST00000542846 MST1RQ04912 1400 aa9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 YTHDC2Q9H6S0 1430 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 DHX57Q6P158 1386 aaKnown RBP9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 ABCC11Q96J66 1382 aa9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 PHLPP1O60346 1717 aa9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 AHDC1Q5TGY3 1603 aaPredicted RBP9.15□□□□□ -0.94
LRTOMT-220ENST00000542846 ADGRB1O14514 1584 aa9.15□□□□□ -0.95
LRTOMT-220ENST00000542846 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.95
LRTOMT-220ENST00000542846 KIAA1210Q9ULL0 1709 aa9.14□□□□□ -0.95
LRTOMT-220ENST00000542846 COL16A1Q07092 1604 aaPredicted RBP9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 NHSL1Q5SYE7 1610 aa9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 TMEM132EQ6IEE7 984 aa9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 DCAF11Q8TEB1 546 aa9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 DLC1Q96QB1 1528 aa9.13□□□□□ -0.95
LRTOMT-220ENST00000542846 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
LRTOMT-220ENST00000542846 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
LRTOMT-220ENST00000542846 STK26Q9P289 416 aa9.11□□□□□ -0.95
LRTOMT-220ENST00000542846 KDM2AQ9Y2K7 1162 aa9.11□□□□□ -0.95
LRTOMT-220ENST00000542846 DISP3Q9P2K9 1392 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms