RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 PPP1R15AO75807 674 aaPredicted RBP26.28■■□□□ 1.8
LTBR-210ENST00000542830 BCANQ96GW7 911 aa26.27■■□□□ 1.8
LTBR-210ENST00000542830 PLEKHG1Q9ULL1 1385 aa26.26■■□□□ 1.79
LTBR-210ENST00000542830 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
LTBR-210ENST00000542830 SPHKAPQ2M3C7 1700 aa26.25■■□□□ 1.79
LTBR-210ENST00000542830 KCNA6P17658 529 aa26.24■■□□□ 1.79
LTBR-210ENST00000542830 TRIM52Q96A61 297 aa26.23■■□□□ 1.79
LTBR-210ENST00000542830 SCAF1Q9H7N4 1312 aaKnown RBP26.22■■□□□ 1.79
LTBR-210ENST00000542830 PIP4K2BP78356 416 aa26.21■■□□□ 1.79
LTBR-210ENST00000542830 TRPM2O94759 1503 aa26.17■■□□□ 1.78
LTBR-210ENST00000542830 SLC4A1APQ9BWU0 796 aaKnown RBP26.16■■□□□ 1.78
LTBR-210ENST00000542830 TBX22Q9Y458 520 aa26.16■■□□□ 1.78
LTBR-210ENST00000542830 NKTRP30414 1462 aaKnown RBP26.16■■□□□ 1.78
LTBR-210ENST00000542830 NWD1Q149M9 1564 aa26.16■■□□□ 1.78
LTBR-210ENST00000542830 ALKQ9UM73 1620 aa26.14■■□□□ 1.77
LTBR-210ENST00000542830 NUTM2DQ5VT03 806 aaPredicted RBP26.13■■□□□ 1.77
LTBR-210ENST00000542830 PROSER2Q86WR7 435 aaPredicted RBP26.13■■□□□ 1.77
LTBR-210ENST00000542830 DIP2AQ14689 1571 aa26.12■■□□□ 1.77
LTBR-210ENST00000542830 TMEM94Q12767 1356 aa26.12■■□□□ 1.77
LTBR-210ENST00000542830 ZNF326Q5BKZ1 582 aaKnown RBP26.12■■□□□ 1.77
LTBR-210ENST00000542830 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
LTBR-210ENST00000542830 CLTCL1P53675 1640 aa26.11■■□□□ 1.77
LTBR-210ENST00000542830 ADAMTS13Q76LX8 1427 aa26.11■■□□□ 1.77
LTBR-210ENST00000542830 ACIN1Q9UKV3 1341 aaKnown RBP26.11■■□□□ 1.77
LTBR-210ENST00000542830 XIRP1Q702N8 1843 aaKnown RBP26.1■■□□□ 1.77
LTBR-210ENST00000542830 PIK3R4Q99570 1358 aa26.09■■□□□ 1.77
LTBR-210ENST00000542830 HSPA1LP34931 641 aa26.09■■□□□ 1.77
LTBR-210ENST00000542830 CHD2O14647 1828 aaKnown RBP26.07■■□□□ 1.76
LTBR-210ENST00000542830 KIF1BO60333 1816 aa26.05■■□□□ 1.76
LTBR-210ENST00000542830 DISP3Q9P2K9 1392 aa26.05■■□□□ 1.76
LTBR-210ENST00000542830 SETBP1Q9Y6X0 1596 aa26.03■■□□□ 1.76
LTBR-210ENST00000542830 MSH6P52701 1360 aa26.02■■□□□ 1.76
LTBR-210ENST00000542830 NEXMIFQ5QGS0 1516 aa26.01■■□□□ 1.75
LTBR-210ENST00000542830 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
LTBR-210ENST00000542830 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
LTBR-210ENST00000542830 NCOA3Q9Y6Q9 1424 aa26.01■■□□□ 1.75
LTBR-210ENST00000542830 MPHOSPH9Q99550 1183 aa26■■□□□ 1.75
LTBR-210ENST00000542830 RPGRIP1LQ68CZ1 1315 aa25.98■■□□□ 1.75
LTBR-210ENST00000542830 FAM135BQ49AJ0 1406 aa25.97■■□□□ 1.75
LTBR-210ENST00000542830 NRXN3Q9Y4C0 1643 aa25.97■■□□□ 1.75
LTBR-210ENST00000542830 VGFO15240 615 aaPredicted RBP25.96■■□□□ 1.75
LTBR-210ENST00000542830 FOXD1Q16676 465 aa25.96■■□□□ 1.75
LTBR-210ENST00000542830 AMOTL2Q9Y2J4 779 aa25.96■■□□□ 1.75
LTBR-210ENST00000542830 CCDC144AA2RUR9 1427 aa25.94■■□□□ 1.74
LTBR-210ENST00000542830 C14orf37Q86TY3 774 aa25.93■■□□□ 1.74
LTBR-210ENST00000542830 PTPRUQ92729 1446 aa25.93■■□□□ 1.74
LTBR-210ENST00000542830 METP08581 1390 aa25.9■■□□□ 1.74
LTBR-210ENST00000542830 RAB3GAP2Q9H2M9 1393 aa25.9■■□□□ 1.74
LTBR-210ENST00000542830 C19orf44Q9H6X5 657 aa25.89■■□□□ 1.74
LTBR-210ENST00000542830 SLAIN2Q9P270 581 aa25.88■■□□□ 1.73
LTBR-210ENST00000542830 XRN1Q8IZH2 1706 aaKnown RBP25.88■■□□□ 1.73
LTBR-210ENST00000542830 CADPS2Q86UW7 1296 aa25.87■■□□□ 1.73
LTBR-210ENST00000542830 ROBO1Q9Y6N7 1651 aa25.86■■□□□ 1.73
LTBR-210ENST00000542830 PPLO60437 1756 aa25.84■■□□□ 1.73
LTBR-210ENST00000542830 ATF3P18847 181 aa25.84■■□□□ 1.73
LTBR-210ENST00000542830 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
LTBR-210ENST00000542830 SPATA31E1Q6ZUB1 1445 aa25.83■■□□□ 1.73
LTBR-210ENST00000542830 DCCP43146 1447 aa25.81■■□□□ 1.72
LTBR-210ENST00000542830 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.81■■□□□ 1.72
LTBR-210ENST00000542830 ANKRD30BQ9BXX2 1392 aa25.81■■□□□ 1.72
LTBR-210ENST00000542830 HRCP23327 699 aa25.8■■□□□ 1.72
LTBR-210ENST00000542830 RGL3Q3MIN7 710 aa25.8■■□□□ 1.72
LTBR-210ENST00000542830 ILDR2Q71H61 639 aa25.78■■□□□ 1.72
LTBR-210ENST00000542830 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
LTBR-210ENST00000542830 PTCH1Q13635 1447 aa25.76■■□□□ 1.71
LTBR-210ENST00000542830 PRAG1Q86YV5 1406 aa25.74■■□□□ 1.71
LTBR-210ENST00000542830 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
LTBR-210ENST00000542830 ADGRL3Q9HAR2 1447 aa25.73■■□□□ 1.71
LTBR-210ENST00000542830 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
LTBR-210ENST00000542830 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
LTBR-210ENST00000542830 PHLPP1O60346 1717 aa25.7■■□□□ 1.7
LTBR-210ENST00000542830 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
LTBR-210ENST00000542830 PIK3C2GO75747 1445 aa25.67■■□□□ 1.7
LTBR-210ENST00000542830 MST1RQ04912 1400 aa25.67■■□□□ 1.7
LTBR-210ENST00000542830 BRINP3Q76B58 766 aa25.66■■□□□ 1.7
LTBR-210ENST00000542830 JCADQ9P266 1359 aa25.66■■□□□ 1.7
LTBR-210ENST00000542830 AHDC1Q5TGY3 1603 aaPredicted RBP25.66■■□□□ 1.7
LTBR-210ENST00000542830 NALCNQ8IZF0 1738 aa25.65■■□□□ 1.7
LTBR-210ENST00000542830 COL16A1Q07092 1604 aaPredicted RBP25.63■■□□□ 1.69
LTBR-210ENST00000542830 MYOM2P54296 1465 aa25.63■■□□□ 1.69
LTBR-210ENST00000542830 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
LTBR-210ENST00000542830 SOCS7O14512 581 aa25.61■■□□□ 1.69
LTBR-210ENST00000542830 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
LTBR-210ENST00000542830 TECPR2O15040 1411 aa25.61■■□□□ 1.69
LTBR-210ENST00000542830 NRXN1Q9ULB1 1477 aa25.6■■□□□ 1.69
LTBR-210ENST00000542830 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
LTBR-210ENST00000542830 C14orf93Q9H972 538 aaKnown RBP25.58■■□□□ 1.69
LTBR-210ENST00000542830 TMEM132EQ6IEE7 984 aa25.57■■□□□ 1.68
LTBR-210ENST00000542830 STK26Q9P289 416 aa25.57■■□□□ 1.68
LTBR-210ENST00000542830 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
LTBR-210ENST00000542830 STAC3Q96MF2 364 aa25.55■■□□□ 1.68
LTBR-210ENST00000542830 SPATA31A6Q5VVP1 1343 aa25.55■■□□□ 1.68
LTBR-210ENST00000542830 LAMC1P11047 1609 aa25.55■■□□□ 1.68
LTBR-210ENST00000542830 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
LTBR-210ENST00000542830 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
LTBR-210ENST00000542830 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
LTBR-210ENST00000542830 CFAP70Q5T0N1 1121 aa25.52■■□□□ 1.68
LTBR-210ENST00000542830 SIRT1Q96EB6 747 aa25.52■■□□□ 1.68
LTBR-210ENST00000542830 DHX57Q6P158 1386 aaKnown RBP25.52■■□□□ 1.68
LTBR-210ENST00000542830 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms