RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 ZNF335Q9H4Z2 1342 aaPredicted RBP22.93■■□□□ 1.26
SPTB-205ENST00000542694 FBXO41Q8TF61 875 aa22.91■■□□□ 1.26
SPTB-205ENST00000542694 ZFYVE9O95405 1425 aa22.9■■□□□ 1.26
SPTB-205ENST00000542694 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
SPTB-205ENST00000542694 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
SPTB-205ENST00000542694 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 LTBP4Q8N2S1 1624 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 FOXD1Q16676 465 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 CCDC144AA2RUR9 1427 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 KIF1BO60333 1816 aa22.87■■□□□ 1.25
SPTB-205ENST00000542694 CPS1P31327 1500 aa22.86■■□□□ 1.25
SPTB-205ENST00000542694 VGFO15240 615 aaPredicted RBP22.85■■□□□ 1.25
SPTB-205ENST00000542694 TRIM26Q12899 539 aaPredicted RBP22.85■■□□□ 1.25
SPTB-205ENST00000542694 TBX22Q9Y458 520 aa22.85■■□□□ 1.25
SPTB-205ENST00000542694 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
SPTB-205ENST00000542694 SLC26A8Q96RN1 970 aa22.83■■□□□ 1.25
SPTB-205ENST00000542694 KCNA6P17658 529 aa22.82■■□□□ 1.24
SPTB-205ENST00000542694 ILDR1Q86SU0 546 aaPredicted RBP22.81■■□□□ 1.24
SPTB-205ENST00000542694 NUTM2DQ5VT03 806 aaPredicted RBP22.8■■□□□ 1.24
SPTB-205ENST00000542694 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
SPTB-205ENST00000542694 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
SPTB-205ENST00000542694 DIP2AQ14689 1571 aa22.73■■□□□ 1.23
SPTB-205ENST00000542694 TOM1O60784 492 aa22.73■■□□□ 1.23
SPTB-205ENST00000542694 ANKRD30BQ9BXX2 1392 aa22.73■■□□□ 1.23
SPTB-205ENST00000542694 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
SPTB-205ENST00000542694 PROSER2Q86WR7 435 aaPredicted RBP22.71■■□□□ 1.23
SPTB-205ENST00000542694 SENP3Q9H4L4 574 aaPredicted RBP22.71■■□□□ 1.23
SPTB-205ENST00000542694 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
SPTB-205ENST00000542694 ADAMTS13Q76LX8 1427 aa22.7■■□□□ 1.22
SPTB-205ENST00000542694 SPATA31E1Q6ZUB1 1445 aa22.69■■□□□ 1.22
SPTB-205ENST00000542694 STAC3Q96MF2 364 aa22.69■■□□□ 1.22
SPTB-205ENST00000542694 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
SPTB-205ENST00000542694 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
SPTB-205ENST00000542694 NKTRP30414 1462 aaKnown RBP22.66■■□□□ 1.22
SPTB-205ENST00000542694 AMOTL2Q9Y2J4 779 aa22.65■■□□□ 1.22
SPTB-205ENST00000542694 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
SPTB-205ENST00000542694 STRCP1A6NGW2 1772 aa22.64■■□□□ 1.22
SPTB-205ENST00000542694 NCOA3Q9Y6Q9 1424 aa22.63■■□□□ 1.21
SPTB-205ENST00000542694 PPLO60437 1756 aa22.62■■□□□ 1.21
SPTB-205ENST00000542694 NWD1Q149M9 1564 aa22.62■■□□□ 1.21
SPTB-205ENST00000542694 TMEM94Q12767 1356 aa22.62■■□□□ 1.21
SPTB-205ENST00000542694 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
SPTB-205ENST00000542694 C14orf37Q86TY3 774 aa22.58■■□□□ 1.21
SPTB-205ENST00000542694 METP08581 1390 aa22.57■■□□□ 1.2
SPTB-205ENST00000542694 MSH6P52701 1360 aa22.57■■□□□ 1.2
SPTB-205ENST00000542694 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
SPTB-205ENST00000542694 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
SPTB-205ENST00000542694 SCAF1Q9H7N4 1312 aaKnown RBP22.55■■□□□ 1.2
SPTB-205ENST00000542694 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
SPTB-205ENST00000542694 C19orf44Q9H6X5 657 aa22.54■■□□□ 1.2
SPTB-205ENST00000542694 PIP4K2BP78356 416 aa22.53■■□□□ 1.2
SPTB-205ENST00000542694 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
SPTB-205ENST00000542694 MYOM2P54296 1465 aa22.53■■□□□ 1.2
SPTB-205ENST00000542694 C14orf93Q9H972 538 aaKnown RBP22.52■■□□□ 1.2
SPTB-205ENST00000542694 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
SPTB-205ENST00000542694 CADPS2Q86UW7 1296 aa22.51■■□□□ 1.19
SPTB-205ENST00000542694 KDM2AQ9Y2K7 1162 aa22.51■■□□□ 1.19
SPTB-205ENST00000542694 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
SPTB-205ENST00000542694 ATF3P18847 181 aa22.5■■□□□ 1.19
SPTB-205ENST00000542694 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
SPTB-205ENST00000542694 XIRP1Q702N8 1843 aaKnown RBP22.48■■□□□ 1.19
SPTB-205ENST00000542694 NRXN1Q9ULB1 1477 aa22.47■■□□□ 1.19
SPTB-205ENST00000542694 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
SPTB-205ENST00000542694 XRN1Q8IZH2 1706 aaKnown RBP22.46■■□□□ 1.19
SPTB-205ENST00000542694 SLAIN2Q9P270 581 aa22.46■■□□□ 1.19
SPTB-205ENST00000542694 SIRT1Q96EB6 747 aa22.45■■□□□ 1.18
SPTB-205ENST00000542694 PTCH1Q13635 1447 aa22.45■■□□□ 1.18
SPTB-205ENST00000542694 PRAG1Q86YV5 1406 aa22.45■■□□□ 1.18
SPTB-205ENST00000542694 LRPPRCP42704 1394 aaKnown RBP22.44■■□□□ 1.18
SPTB-205ENST00000542694 CFAP70Q5T0N1 1121 aa22.44■■□□□ 1.18
SPTB-205ENST00000542694 ABCC11Q96J66 1382 aa22.44■■□□□ 1.18
SPTB-205ENST00000542694 SETD1AO15047 1707 aaKnown RBP22.43■■□□□ 1.18
SPTB-205ENST00000542694 FAM135BQ49AJ0 1406 aa22.43■■□□□ 1.18
SPTB-205ENST00000542694 STK26Q9P289 416 aa22.43■■□□□ 1.18
SPTB-205ENST00000542694 LAMC1P11047 1609 aa22.42■■□□□ 1.18
SPTB-205ENST00000542694 DCCP43146 1447 aa22.42■■□□□ 1.18
SPTB-205ENST00000542694 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
SPTB-205ENST00000542694 NEUROD1Q13562 356 aa22.41■■□□□ 1.18
SPTB-205ENST00000542694 PCGF6Q9BYE7 350 aa22.41■■□□□ 1.18
SPTB-205ENST00000542694 TECPR2O15040 1411 aa22.39■■□□□ 1.17
SPTB-205ENST00000542694 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
SPTB-205ENST00000542694 ROBO2Q9HCK4 1378 aa22.38■■□□□ 1.17
SPTB-205ENST00000542694 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
SPTB-205ENST00000542694 ADGRL3Q9HAR2 1447 aa22.38■■□□□ 1.17
SPTB-205ENST00000542694 HSPA1LP34931 641 aa22.36■■□□□ 1.17
SPTB-205ENST00000542694 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.36■■□□□ 1.17
SPTB-205ENST00000542694 L3MBTL2Q969R5 705 aa22.35■■□□□ 1.17
SPTB-205ENST00000542694 POGKQ9P215 609 aa22.32■■□□□ 1.16
SPTB-205ENST00000542694 WAPLQ7Z5K2 1190 aa22.31■■□□□ 1.16
SPTB-205ENST00000542694 KNDC1Q76NI1 1749 aa22.3■■□□□ 1.16
SPTB-205ENST00000542694 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
SPTB-205ENST00000542694 ASXL1Q8IXJ9 1541 aa22.28■■□□□ 1.16
SPTB-205ENST00000542694 TRAK1Q9UPV9 953 aa22.28■■□□□ 1.16
SPTB-205ENST00000542694 TONSLQ96HA7 1378 aa22.27■■□□□ 1.16
SPTB-205ENST00000542694 DLC1Q96QB1 1528 aa22.27■■□□□ 1.16
SPTB-205ENST00000542694 PRAM1Q96QH2 718 aa22.27■■□□□ 1.16
SPTB-205ENST00000542694 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
SPTB-205ENST00000542694 KIAA1210Q9ULL0 1709 aa22.26■■□□□ 1.15
SPTB-205ENST00000542694 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms