RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 NRXN3Q9Y4C0 1643 aa17.3■□□□□ 0.36
C2CD3-217ENST00000542452 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
C2CD3-217ENST00000542452 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
C2CD3-217ENST00000542452 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
C2CD3-217ENST00000542452 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
C2CD3-217ENST00000542452 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
C2CD3-217ENST00000542452 SLC4A1APQ9BWU0 796 aaKnown RBP17.28■□□□□ 0.36
C2CD3-217ENST00000542452 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
C2CD3-217ENST00000542452 PLEKHG1Q9ULL1 1385 aa17.28■□□□□ 0.36
C2CD3-217ENST00000542452 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.36
C2CD3-217ENST00000542452 FOXD1Q16676 465 aa17.27■□□□□ 0.36
C2CD3-217ENST00000542452 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
C2CD3-217ENST00000542452 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
C2CD3-217ENST00000542452 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
C2CD3-217ENST00000542452 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
C2CD3-217ENST00000542452 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
C2CD3-217ENST00000542452 PPLO60437 1756 aa17.24■□□□□ 0.35
C2CD3-217ENST00000542452 SLC26A8Q96RN1 970 aa17.23■□□□□ 0.35
C2CD3-217ENST00000542452 MPHOSPH9Q99550 1183 aa17.23■□□□□ 0.35
C2CD3-217ENST00000542452 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
C2CD3-217ENST00000542452 IFT172Q9UG01 1749 aa17.22■□□□□ 0.35
C2CD3-217ENST00000542452 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
C2CD3-217ENST00000542452 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
C2CD3-217ENST00000542452 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
C2CD3-217ENST00000542452 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
C2CD3-217ENST00000542452 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
C2CD3-217ENST00000542452 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
C2CD3-217ENST00000542452 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
C2CD3-217ENST00000542452 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
C2CD3-217ENST00000542452 ZNF326Q5BKZ1 582 aaKnown RBP17.16■□□□□ 0.34
C2CD3-217ENST00000542452 KCNA6P17658 529 aa17.15■□□□□ 0.34
C2CD3-217ENST00000542452 UBAP1LF5GYI3 381 aa17.14■□□□□ 0.33
C2CD3-217ENST00000542452 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
C2CD3-217ENST00000542452 BCANQ96GW7 911 aa17.14■□□□□ 0.33
C2CD3-217ENST00000542452 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
C2CD3-217ENST00000542452 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
C2CD3-217ENST00000542452 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
C2CD3-217ENST00000542452 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
C2CD3-217ENST00000542452 METP08581 1390 aa17.1■□□□□ 0.33
C2CD3-217ENST00000542452 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
C2CD3-217ENST00000542452 HRCP23327 699 aa17.09■□□□□ 0.33
C2CD3-217ENST00000542452 ANKRD30BQ9BXX2 1392 aa17.09■□□□□ 0.33
C2CD3-217ENST00000542452 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
C2CD3-217ENST00000542452 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
C2CD3-217ENST00000542452 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
C2CD3-217ENST00000542452 ADGRF5Q8IZF2 1346 aa17.05■□□□□ 0.32
C2CD3-217ENST00000542452 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
C2CD3-217ENST00000542452 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
C2CD3-217ENST00000542452 TOM1O60784 492 aa17.04■□□□□ 0.32
C2CD3-217ENST00000542452 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
C2CD3-217ENST00000542452 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
C2CD3-217ENST00000542452 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
C2CD3-217ENST00000542452 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
C2CD3-217ENST00000542452 MYOM2P54296 1465 aa17.03■□□□□ 0.32
C2CD3-217ENST00000542452 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
C2CD3-217ENST00000542452 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
C2CD3-217ENST00000542452 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
C2CD3-217ENST00000542452 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
C2CD3-217ENST00000542452 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
C2CD3-217ENST00000542452 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
C2CD3-217ENST00000542452 PTCH1Q13635 1447 aa17■□□□□ 0.31
C2CD3-217ENST00000542452 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
C2CD3-217ENST00000542452 MSH6P52701 1360 aa16.99■□□□□ 0.31
C2CD3-217ENST00000542452 HSPA1LP34931 641 aa16.98■□□□□ 0.31
C2CD3-217ENST00000542452 LAMC1P11047 1609 aa16.98■□□□□ 0.31
C2CD3-217ENST00000542452 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
C2CD3-217ENST00000542452 ADGRL3Q9HAR2 1447 aa16.96■□□□□ 0.3
C2CD3-217ENST00000542452 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
C2CD3-217ENST00000542452 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
C2CD3-217ENST00000542452 TECPR2O15040 1411 aa16.93■□□□□ 0.3
C2CD3-217ENST00000542452 DCCP43146 1447 aa16.93■□□□□ 0.3
C2CD3-217ENST00000542452 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
C2CD3-217ENST00000542452 MST1RQ04912 1400 aa16.91■□□□□ 0.3
C2CD3-217ENST00000542452 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
C2CD3-217ENST00000542452 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
C2CD3-217ENST00000542452 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
C2CD3-217ENST00000542452 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
C2CD3-217ENST00000542452 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
C2CD3-217ENST00000542452 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
C2CD3-217ENST00000542452 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
C2CD3-217ENST00000542452 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
C2CD3-217ENST00000542452 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
C2CD3-217ENST00000542452 AHDC1Q5TGY3 1603 aaPredicted RBP16.88■□□□□ 0.29
C2CD3-217ENST00000542452 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
C2CD3-217ENST00000542452 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
C2CD3-217ENST00000542452 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
C2CD3-217ENST00000542452 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
C2CD3-217ENST00000542452 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
C2CD3-217ENST00000542452 SLAIN2Q9P270 581 aa16.87■□□□□ 0.29
C2CD3-217ENST00000542452 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
C2CD3-217ENST00000542452 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
C2CD3-217ENST00000542452 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
C2CD3-217ENST00000542452 ATF3P18847 181 aa16.84■□□□□ 0.29
C2CD3-217ENST00000542452 DCAF11Q8TEB1 546 aa16.84■□□□□ 0.29
C2CD3-217ENST00000542452 STK26Q9P289 416 aa16.84■□□□□ 0.29
C2CD3-217ENST00000542452 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
C2CD3-217ENST00000542452 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
C2CD3-217ENST00000542452 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
C2CD3-217ENST00000542452 C1orf167Q5SNV9 1468 aa16.83■□□□□ 0.28
C2CD3-217ENST00000542452 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms