RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.91■■■□□ 2.38
CACNA2D4-215ENST00000542340 MPHOSPH9Q99550 1183 aa29.9■■■□□ 2.38
CACNA2D4-215ENST00000542340 CPS1P31327 1500 aa29.9■■■□□ 2.38
CACNA2D4-215ENST00000542340 RAB3GAP2Q9H2M9 1393 aa29.88■■■□□ 2.37
CACNA2D4-215ENST00000542340 PPP1R15AO75807 674 aaPredicted RBP29.87■■■□□ 2.37
CACNA2D4-215ENST00000542340 PLEKHG1Q9ULL1 1385 aa29.86■■■□□ 2.37
CACNA2D4-215ENST00000542340 CLTCL1P53675 1640 aa29.84■■■□□ 2.37
CACNA2D4-215ENST00000542340 BCANQ96GW7 911 aa29.83■■■□□ 2.37
CACNA2D4-215ENST00000542340 SLC26A8Q96RN1 970 aa29.83■■■□□ 2.37
CACNA2D4-215ENST00000542340 FOXD1Q16676 465 aa29.82■■■□□ 2.36
CACNA2D4-215ENST00000542340 HRCP23327 699 aa29.81■■■□□ 2.36
CACNA2D4-215ENST00000542340 ZNF326Q5BKZ1 582 aaKnown RBP29.8■■■□□ 2.36
CACNA2D4-215ENST00000542340 NUTM2DQ5VT03 806 aaPredicted RBP29.79■■■□□ 2.36
CACNA2D4-215ENST00000542340 STRCP1A6NGW2 1772 aa29.77■■■□□ 2.36
CACNA2D4-215ENST00000542340 TBX22Q9Y458 520 aa29.76■■■□□ 2.35
CACNA2D4-215ENST00000542340 KCNA6P17658 529 aa29.75■■■□□ 2.35
CACNA2D4-215ENST00000542340 KIF1BO60333 1816 aa29.75■■■□□ 2.35
CACNA2D4-215ENST00000542340 LRRC7Q96NW7 1537 aa29.73■■■□□ 2.35
CACNA2D4-215ENST00000542340 SENP3Q9H4L4 574 aaPredicted RBP29.73■■■□□ 2.35
CACNA2D4-215ENST00000542340 CCDC144AA2RUR9 1427 aa29.71■■■□□ 2.35
CACNA2D4-215ENST00000542340 UBAP1LF5GYI3 381 aa29.7■■■□□ 2.35
CACNA2D4-215ENST00000542340 ADAMTS13Q76LX8 1427 aa29.7■■■□□ 2.34
CACNA2D4-215ENST00000542340 RPGRIP1LQ68CZ1 1315 aa29.69■■■□□ 2.34
CACNA2D4-215ENST00000542340 NEXMIFQ5QGS0 1516 aa29.68■■■□□ 2.34
CACNA2D4-215ENST00000542340 DIP2AQ14689 1571 aa29.66■■■□□ 2.34
CACNA2D4-215ENST00000542340 VGFO15240 615 aaPredicted RBP29.64■■■□□ 2.34
CACNA2D4-215ENST00000542340 TOM1O60784 492 aa29.64■■■□□ 2.34
CACNA2D4-215ENST00000542340 NWD1Q149M9 1564 aa29.64■■■□□ 2.33
CACNA2D4-215ENST00000542340 PIK3R4Q99570 1358 aa29.64■■■□□ 2.33
CACNA2D4-215ENST00000542340 SETBP1Q9Y6X0 1596 aa29.63■■■□□ 2.33
CACNA2D4-215ENST00000542340 NKTRP30414 1462 aaKnown RBP29.61■■■□□ 2.33
CACNA2D4-215ENST00000542340 PROSER2Q86WR7 435 aaPredicted RBP29.61■■■□□ 2.33
CACNA2D4-215ENST00000542340 SPATA31E1Q6ZUB1 1445 aa29.6■■■□□ 2.33
CACNA2D4-215ENST00000542340 CHD2O14647 1828 aaKnown RBP29.59■■■□□ 2.33
CACNA2D4-215ENST00000542340 TMEM94Q12767 1356 aa29.58■■■□□ 2.33
CACNA2D4-215ENST00000542340 NRXN3Q9Y4C0 1643 aa29.58■■■□□ 2.33
CACNA2D4-215ENST00000542340 RGL3Q3MIN7 710 aa29.56■■■□□ 2.32
CACNA2D4-215ENST00000542340 ANKRD30BQ9BXX2 1392 aa29.55■■■□□ 2.32
CACNA2D4-215ENST00000542340 XIRP1Q702N8 1843 aaKnown RBP29.53■■■□□ 2.32
CACNA2D4-215ENST00000542340 PPLO60437 1756 aa29.52■■■□□ 2.32
CACNA2D4-215ENST00000542340 AMOTL2Q9Y2J4 779 aa29.52■■■□□ 2.32
CACNA2D4-215ENST00000542340 METP08581 1390 aa29.51■■■□□ 2.31
CACNA2D4-215ENST00000542340 ALKQ9UM73 1620 aa29.5■■■□□ 2.31
CACNA2D4-215ENST00000542340 PIP4K2BP78356 416 aa29.5■■■□□ 2.31
CACNA2D4-215ENST00000542340 RBM33Q96EV2 1170 aaKnown RBP29.5■■■□□ 2.31
CACNA2D4-215ENST00000542340 PTPRUQ92729 1446 aa29.5■■■□□ 2.31
CACNA2D4-215ENST00000542340 NCOA3Q9Y6Q9 1424 aa29.48■■■□□ 2.31
CACNA2D4-215ENST00000542340 SCAF1Q9H7N4 1312 aaKnown RBP29.47■■■□□ 2.31
CACNA2D4-215ENST00000542340 ADGRF5Q8IZF2 1346 aa29.45■■■□□ 2.31
CACNA2D4-215ENST00000542340 MSH6P52701 1360 aa29.43■■■□□ 2.3
CACNA2D4-215ENST00000542340 IFT172Q9UG01 1749 aa29.42■■■□□ 2.3
CACNA2D4-215ENST00000542340 TRIM26Q12899 539 aaPredicted RBP29.41■■■□□ 2.3
CACNA2D4-215ENST00000542340 XRN1Q8IZH2 1706 aaKnown RBP29.41■■■□□ 2.3
CACNA2D4-215ENST00000542340 SETD1AO15047 1707 aaKnown RBP29.38■■■□□ 2.29
CACNA2D4-215ENST00000542340 C14orf37Q86TY3 774 aa29.38■■■□□ 2.29
CACNA2D4-215ENST00000542340 C19orf44Q9H6X5 657 aa29.36■■■□□ 2.29
CACNA2D4-215ENST00000542340 PIK3C2GO75747 1445 aa29.35■■■□□ 2.29
CACNA2D4-215ENST00000542340 HSPA1LP34931 641 aa29.34■■■□□ 2.29
CACNA2D4-215ENST00000542340 MYOM2P54296 1465 aa29.34■■■□□ 2.29
CACNA2D4-215ENST00000542340 NRXN1Q9ULB1 1477 aa29.32■■■□□ 2.28
CACNA2D4-215ENST00000542340 FAM135BQ49AJ0 1406 aa29.32■■■□□ 2.28
CACNA2D4-215ENST00000542340 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
CACNA2D4-215ENST00000542340 SLAIN2Q9P270 581 aa29.31■■■□□ 2.28
CACNA2D4-215ENST00000542340 CADPS2Q86UW7 1296 aa29.3■■■□□ 2.28
CACNA2D4-215ENST00000542340 STAC3Q96MF2 364 aa29.3■■■□□ 2.28
CACNA2D4-215ENST00000542340 PTCH1Q13635 1447 aa29.29■■■□□ 2.28
CACNA2D4-215ENST00000542340 C14orf93Q9H972 538 aaKnown RBP29.29■■■□□ 2.28
CACNA2D4-215ENST00000542340 ATF3P18847 181 aa29.28■■■□□ 2.28
CACNA2D4-215ENST00000542340 ROBO2Q9HCK4 1378 aa29.26■■■□□ 2.28
CACNA2D4-215ENST00000542340 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.26■■■□□ 2.27
CACNA2D4-215ENST00000542340 DCAF11Q8TEB1 546 aa29.26■■■□□ 2.27
CACNA2D4-215ENST00000542340 DCCP43146 1447 aa29.25■■■□□ 2.27
CACNA2D4-215ENST00000542340 DHX57Q6P158 1386 aaKnown RBP29.24■■■□□ 2.27
CACNA2D4-215ENST00000542340 CFAP70Q5T0N1 1121 aa29.23■■■□□ 2.27
CACNA2D4-215ENST00000542340 TMEM132EQ6IEE7 984 aa29.23■■■□□ 2.27
CACNA2D4-215ENST00000542340 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
CACNA2D4-215ENST00000542340 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
CACNA2D4-215ENST00000542340 ADGRL3Q9HAR2 1447 aa29.22■■■□□ 2.27
CACNA2D4-215ENST00000542340 ABCC11Q96J66 1382 aa29.22■■■□□ 2.27
CACNA2D4-215ENST00000542340 TECPR2O15040 1411 aa29.2■■■□□ 2.27
CACNA2D4-215ENST00000542340 ASXL1Q8IXJ9 1541 aa29.2■■■□□ 2.27
CACNA2D4-215ENST00000542340 STK26Q9P289 416 aa29.2■■■□□ 2.26
CACNA2D4-215ENST00000542340 ROBO1Q9Y6N7 1651 aa29.19■■■□□ 2.26
CACNA2D4-215ENST00000542340 LAMC1P11047 1609 aa29.19■■■□□ 2.26
CACNA2D4-215ENST00000542340 YTHDC2Q9H6S0 1430 aaKnown RBP29.18■■■□□ 2.26
CACNA2D4-215ENST00000542340 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
CACNA2D4-215ENST00000542340 NALCNQ8IZF0 1738 aa29.14■■■□□ 2.25
CACNA2D4-215ENST00000542340 MST1RQ04912 1400 aa29.12■■■□□ 2.25
CACNA2D4-215ENST00000542340 KNDC1Q76NI1 1749 aa29.11■■■□□ 2.25
CACNA2D4-215ENST00000542340 WAPLQ7Z5K2 1190 aa29.11■■■□□ 2.25
CACNA2D4-215ENST00000542340 SIN3AQ96ST3 1273 aa29.09■■■□□ 2.25
CACNA2D4-215ENST00000542340 BRINP3Q76B58 766 aa29.08■■■□□ 2.25
CACNA2D4-215ENST00000542340 ADGRB1O14514 1584 aa29.07■■■□□ 2.24
CACNA2D4-215ENST00000542340 PLEKHH1Q9ULM0 1364 aa29.05■■■□□ 2.24
CACNA2D4-215ENST00000542340 NEUROD1Q13562 356 aa29.03■■■□□ 2.24
CACNA2D4-215ENST00000542340 C1orf167Q5SNV9 1468 aa29.03■■■□□ 2.24
CACNA2D4-215ENST00000542340 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
CACNA2D4-215ENST00000542340 DLC1Q96QB1 1528 aa29.01■■■□□ 2.23
CACNA2D4-215ENST00000542340 CDC42BPGQ6DT37 1551 aa29.01■■■□□ 2.23
CACNA2D4-215ENST00000542340 DISP3Q9P2K9 1392 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms