RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 SLC52A1Q9NWF4 448 aa11.74□□□□□ -0.53
NECAP1-205ENST00000541948 HFM1A2PYH4 1435 aa11.73□□□□□ -0.53
NECAP1-205ENST00000541948 CLTCL1P53675 1640 aa11.72□□□□□ -0.53
NECAP1-205ENST00000541948 NWD1Q149M9 1564 aa11.71□□□□□ -0.53
NECAP1-205ENST00000541948 RIMS2Q9UQ26 1411 aa11.71□□□□□ -0.53
NECAP1-205ENST00000541948 UBAP1LF5GYI3 381 aa11.71□□□□□ -0.53
NECAP1-205ENST00000541948 TOM1O60784 492 aa11.71□□□□□ -0.53
NECAP1-205ENST00000541948 SLC26A8Q96RN1 970 aa11.71□□□□□ -0.53
NECAP1-205ENST00000541948 NRXN3Q9Y4C0 1643 aa11.71□□□□□ -0.54
NECAP1-205ENST00000541948 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
NECAP1-205ENST00000541948 CACNB1Q02641 598 aaPredicted RBP11.7□□□□□ -0.54
NECAP1-205ENST00000541948 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
NECAP1-205ENST00000541948 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
NECAP1-205ENST00000541948 EID1Q9Y6B2 187 aa11.69□□□□□ -0.54
NECAP1-205ENST00000541948 CHD2O14647 1828 aaKnown RBP11.69□□□□□ -0.54
NECAP1-205ENST00000541948 DISP3Q9P2K9 1392 aa11.68□□□□□ -0.54
NECAP1-205ENST00000541948 RBM33Q96EV2 1170 aaKnown RBP11.68□□□□□ -0.54
NECAP1-205ENST00000541948 TRPM2O94759 1503 aa11.68□□□□□ -0.54
NECAP1-205ENST00000541948 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
NECAP1-205ENST00000541948 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
NECAP1-205ENST00000541948 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
NECAP1-205ENST00000541948 HSPA1LP34931 641 aa11.65□□□□□ -0.54
NECAP1-205ENST00000541948 PTPRUQ92729 1446 aa11.65□□□□□ -0.54
NECAP1-205ENST00000541948 TMEM94Q12767 1356 aa11.65□□□□□ -0.55
NECAP1-205ENST00000541948 KCNA6P17658 529 aa11.64□□□□□ -0.55
NECAP1-205ENST00000541948 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
NECAP1-205ENST00000541948 KIF1BO60333 1816 aa11.63□□□□□ -0.55
NECAP1-205ENST00000541948 SOCS7O14512 581 aa11.63□□□□□ -0.55
NECAP1-205ENST00000541948 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
NECAP1-205ENST00000541948 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
NECAP1-205ENST00000541948 SETBP1Q9Y6X0 1596 aa11.62□□□□□ -0.55
NECAP1-205ENST00000541948 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
NECAP1-205ENST00000541948 TRIM52Q96A61 297 aa11.61□□□□□ -0.55
NECAP1-205ENST00000541948 TBX22Q9Y458 520 aa11.61□□□□□ -0.55
NECAP1-205ENST00000541948 DIP2AQ14689 1571 aa11.61□□□□□ -0.55
NECAP1-205ENST00000541948 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
NECAP1-205ENST00000541948 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
NECAP1-205ENST00000541948 ILDR2Q71H61 639 aa11.6□□□□□ -0.55
NECAP1-205ENST00000541948 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
NECAP1-205ENST00000541948 PPLO60437 1756 aa11.59□□□□□ -0.55
NECAP1-205ENST00000541948 METP08581 1390 aa11.59□□□□□ -0.55
NECAP1-205ENST00000541948 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
NECAP1-205ENST00000541948 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
NECAP1-205ENST00000541948 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
NECAP1-205ENST00000541948 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
NECAP1-205ENST00000541948 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.58□□□□□ -0.56
NECAP1-205ENST00000541948 BCANQ96GW7 911 aa11.58□□□□□ -0.56
NECAP1-205ENST00000541948 ROBO1Q9Y6N7 1651 aa11.58□□□□□ -0.56
NECAP1-205ENST00000541948 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-205ENST00000541948 MPHOSPH9Q99550 1183 aa11.57□□□□□ -0.56
NECAP1-205ENST00000541948 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
NECAP1-205ENST00000541948 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-205ENST00000541948 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
NECAP1-205ENST00000541948 RAB3GAP2Q9H2M9 1393 aa11.55□□□□□ -0.56
NECAP1-205ENST00000541948 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
NECAP1-205ENST00000541948 FAM135BQ49AJ0 1406 aa11.54□□□□□ -0.56
NECAP1-205ENST00000541948 ZNF326Q5BKZ1 582 aaKnown RBP11.54□□□□□ -0.56
NECAP1-205ENST00000541948 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
NECAP1-205ENST00000541948 NALCNQ8IZF0 1738 aa11.54□□□□□ -0.56
NECAP1-205ENST00000541948 ASXL1Q8IXJ9 1541 aa11.53□□□□□ -0.56
NECAP1-205ENST00000541948 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
NECAP1-205ENST00000541948 MSH6P52701 1360 aa11.51□□□□□ -0.57
NECAP1-205ENST00000541948 COL16A1Q07092 1604 aaPredicted RBP11.5□□□□□ -0.57
NECAP1-205ENST00000541948 CCDC144AA2RUR9 1427 aa11.5□□□□□ -0.57
NECAP1-205ENST00000541948 NCOA3Q9Y6Q9 1424 aa11.5□□□□□ -0.57
NECAP1-205ENST00000541948 SLAIN2Q9P270 581 aa11.49□□□□□ -0.57
NECAP1-205ENST00000541948 ROBO2Q9HCK4 1378 aa11.49□□□□□ -0.57
NECAP1-205ENST00000541948 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
NECAP1-205ENST00000541948 RPGRIP1LQ68CZ1 1315 aa11.48□□□□□ -0.57
NECAP1-205ENST00000541948 MST1RQ04912 1400 aa11.48□□□□□ -0.57
NECAP1-205ENST00000541948 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
NECAP1-205ENST00000541948 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
NECAP1-205ENST00000541948 PIK3C2GO75747 1445 aa11.46□□□□□ -0.57
NECAP1-205ENST00000541948 ADGRL3Q9HAR2 1447 aa11.46□□□□□ -0.57
NECAP1-205ENST00000541948 ANKRD30BQ9BXX2 1392 aa11.46□□□□□ -0.57
NECAP1-205ENST00000541948 VGFO15240 615 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-205ENST00000541948 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.57
NECAP1-205ENST00000541948 RGS17Q9UGC6 210 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-205ENST00000541948 AHDC1Q5TGY3 1603 aaPredicted RBP11.46□□□□□ -0.58
NECAP1-205ENST00000541948 NRXN1Q9ULB1 1477 aa11.45□□□□□ -0.58
NECAP1-205ENST00000541948 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
NECAP1-205ENST00000541948 NHSL1Q5SYE7 1610 aa11.45□□□□□ -0.58
NECAP1-205ENST00000541948 DCCP43146 1447 aa11.44□□□□□ -0.58
NECAP1-205ENST00000541948 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
NECAP1-205ENST00000541948 PLEKHH1Q9ULM0 1364 aa11.43□□□□□ -0.58
NECAP1-205ENST00000541948 LRP6O75581 1613 aa11.43□□□□□ -0.58
NECAP1-205ENST00000541948 BRINP3Q76B58 766 aa11.43□□□□□ -0.58
NECAP1-205ENST00000541948 C14orf37Q86TY3 774 aa11.43□□□□□ -0.58
NECAP1-205ENST00000541948 TMEM132EQ6IEE7 984 aa11.42□□□□□ -0.58
NECAP1-205ENST00000541948 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
NECAP1-205ENST00000541948 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
NECAP1-205ENST00000541948 MYOM2P54296 1465 aa11.42□□□□□ -0.58
NECAP1-205ENST00000541948 TECPR2O15040 1411 aa11.42□□□□□ -0.58
NECAP1-205ENST00000541948 DHX57Q6P158 1386 aaKnown RBP11.41□□□□□ -0.58
NECAP1-205ENST00000541948 SHPRHQ149N8 1683 aa11.4□□□□□ -0.58
NECAP1-205ENST00000541948 LAMC1P11047 1609 aa11.4□□□□□ -0.58
NECAP1-205ENST00000541948 ATF3P18847 181 aa11.4□□□□□ -0.58
NECAP1-205ENST00000541948 ADGRB1O14514 1584 aa11.4□□□□□ -0.58
NECAP1-205ENST00000541948 LRPPRCP42704 1394 aaKnown RBP11.4□□□□□ -0.59
NECAP1-205ENST00000541948 C1orf167Q5SNV9 1468 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms