RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 BCANQ96GW7 911 aa33.21■■■□□ 2.91
C2CD3-216ENST00000541922 LRRC7Q96NW7 1537 aa33.21■■■□□ 2.91
C2CD3-216ENST00000541922 SLC26A8Q96RN1 970 aa33.2■■■□□ 2.91
C2CD3-216ENST00000541922 TOM1O60784 492 aa33.19■■■□□ 2.9
C2CD3-216ENST00000541922 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.17■■■□□ 2.9
C2CD3-216ENST00000541922 PLEKHG1Q9ULL1 1385 aa33.15■■■□□ 2.9
C2CD3-216ENST00000541922 SCAF1Q9H7N4 1312 aaKnown RBP33.13■■■□□ 2.89
C2CD3-216ENST00000541922 SENP3Q9H4L4 574 aaPredicted RBP33.13■■■□□ 2.89
C2CD3-216ENST00000541922 KCNA6P17658 529 aa33.11■■■□□ 2.89
C2CD3-216ENST00000541922 PIP4K2BP78356 416 aa33.11■■■□□ 2.89
C2CD3-216ENST00000541922 NUTM2DQ5VT03 806 aaPredicted RBP33.09■■■□□ 2.89
C2CD3-216ENST00000541922 SLC4A1APQ9BWU0 796 aaKnown RBP33.09■■■□□ 2.89
C2CD3-216ENST00000541922 TRPM2O94759 1503 aa33.07■■■□□ 2.89
C2CD3-216ENST00000541922 CLTCL1P53675 1640 aa33.06■■■□□ 2.88
C2CD3-216ENST00000541922 XIRP1Q702N8 1843 aaKnown RBP33.05■■■□□ 2.88
C2CD3-216ENST00000541922 ZNF326Q5BKZ1 582 aaKnown RBP33.03■■■□□ 2.88
C2CD3-216ENST00000541922 ALKQ9UM73 1620 aa33.02■■■□□ 2.88
C2CD3-216ENST00000541922 NWD1Q149M9 1564 aa33.02■■■□□ 2.88
C2CD3-216ENST00000541922 TBX22Q9Y458 520 aa33.02■■■□□ 2.88
C2CD3-216ENST00000541922 KIF1BO60333 1816 aa33.01■■■□□ 2.87
C2CD3-216ENST00000541922 PROSER2Q86WR7 435 aaPredicted RBP33.01■■■□□ 2.87
C2CD3-216ENST00000541922 CHD2O14647 1828 aaKnown RBP33■■■□□ 2.87
C2CD3-216ENST00000541922 NKTRP30414 1462 aaKnown RBP32.99■■■□□ 2.87
C2CD3-216ENST00000541922 TMEM94Q12767 1356 aa32.99■■■□□ 2.87
C2CD3-216ENST00000541922 ADAMTS13Q76LX8 1427 aa32.98■■■□□ 2.87
C2CD3-216ENST00000541922 DIP2AQ14689 1571 aa32.97■■■□□ 2.87
C2CD3-216ENST00000541922 HSPA1LP34931 641 aa32.94■■■□□ 2.86
C2CD3-216ENST00000541922 RBM33Q96EV2 1170 aaKnown RBP32.92■■■□□ 2.86
C2CD3-216ENST00000541922 ACIN1Q9UKV3 1341 aaKnown RBP32.91■■■□□ 2.86
C2CD3-216ENST00000541922 SETD5Q9C0A6 1442 aa32.91■■■□□ 2.86
C2CD3-216ENST00000541922 FOXD1Q16676 465 aa32.9■■■□□ 2.86
C2CD3-216ENST00000541922 MPHOSPH9Q99550 1183 aa32.9■■■□□ 2.86
C2CD3-216ENST00000541922 PIK3R4Q99570 1358 aa32.9■■■□□ 2.86
C2CD3-216ENST00000541922 NEXMIFQ5QGS0 1516 aa32.89■■■□□ 2.86
C2CD3-216ENST00000541922 SETBP1Q9Y6X0 1596 aa32.87■■■□□ 2.85
C2CD3-216ENST00000541922 NRXN3Q9Y4C0 1643 aa32.86■■■□□ 2.85
C2CD3-216ENST00000541922 DISP3Q9P2K9 1392 aa32.84■■■□□ 2.85
C2CD3-216ENST00000541922 MSH6P52701 1360 aa32.83■■■□□ 2.85
C2CD3-216ENST00000541922 AMOTL2Q9Y2J4 779 aa32.8■■■□□ 2.84
C2CD3-216ENST00000541922 CCDC144AA2RUR9 1427 aa32.79■■■□□ 2.84
C2CD3-216ENST00000541922 RPGRIP1LQ68CZ1 1315 aa32.78■■■□□ 2.84
C2CD3-216ENST00000541922 VGFO15240 615 aaPredicted RBP32.78■■■□□ 2.84
C2CD3-216ENST00000541922 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
C2CD3-216ENST00000541922 PTPRUQ92729 1446 aa32.77■■■□□ 2.84
C2CD3-216ENST00000541922 NCOA3Q9Y6Q9 1424 aa32.77■■■□□ 2.84
C2CD3-216ENST00000541922 C14orf37Q86TY3 774 aa32.76■■■□□ 2.83
C2CD3-216ENST00000541922 FAM135BQ49AJ0 1406 aa32.75■■■□□ 2.83
C2CD3-216ENST00000541922 PPLO60437 1756 aa32.73■■■□□ 2.83
C2CD3-216ENST00000541922 METP08581 1390 aa32.73■■■□□ 2.83
C2CD3-216ENST00000541922 XRN1Q8IZH2 1706 aaKnown RBP32.72■■■□□ 2.83
C2CD3-216ENST00000541922 ROBO1Q9Y6N7 1651 aa32.69■■■□□ 2.82
C2CD3-216ENST00000541922 SLAIN2Q9P270 581 aa32.68■■■□□ 2.82
C2CD3-216ENST00000541922 RGL3Q3MIN7 710 aa32.67■■■□□ 2.82
C2CD3-216ENST00000541922 C19orf44Q9H6X5 657 aa32.67■■■□□ 2.82
C2CD3-216ENST00000541922 SPATA31E1Q6ZUB1 1445 aa32.66■■■□□ 2.82
C2CD3-216ENST00000541922 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.65■■■□□ 2.82
C2CD3-216ENST00000541922 CADPS2Q86UW7 1296 aa32.63■■■□□ 2.81
C2CD3-216ENST00000541922 SETD1AO15047 1707 aaKnown RBP32.63■■■□□ 2.81
C2CD3-216ENST00000541922 ATF3P18847 181 aa32.62■■■□□ 2.81
C2CD3-216ENST00000541922 MED1Q15648 1581 aaPredicted RBP32.61■■■□□ 2.81
C2CD3-216ENST00000541922 ANKRD30BQ9BXX2 1392 aa32.58■■■□□ 2.81
C2CD3-216ENST00000541922 IFT172Q9UG01 1749 aa32.58■■■□□ 2.81
C2CD3-216ENST00000541922 HRCP23327 699 aa32.57■■■□□ 2.8
C2CD3-216ENST00000541922 ADGRF5Q8IZF2 1346 aa32.56■■■□□ 2.8
C2CD3-216ENST00000541922 DCCP43146 1447 aa32.54■■■□□ 2.8
C2CD3-216ENST00000541922 ILDR2Q71H61 639 aa32.53■■■□□ 2.8
C2CD3-216ENST00000541922 PHLPP1O60346 1717 aa32.51■■■□□ 2.79
C2CD3-216ENST00000541922 PTCH1Q13635 1447 aa32.5■■■□□ 2.79
C2CD3-216ENST00000541922 ADGRL3Q9HAR2 1447 aa32.5■■■□□ 2.79
C2CD3-216ENST00000541922 NALCNQ8IZF0 1738 aa32.47■■■□□ 2.79
C2CD3-216ENST00000541922 ROBO2Q9HCK4 1378 aa32.46■■■□□ 2.79
C2CD3-216ENST00000541922 PRAG1Q86YV5 1406 aa32.46■■■□□ 2.79
C2CD3-216ENST00000541922 PHF23Q9BUL5 403 aaPredicted RBP32.44■■■□□ 2.78
C2CD3-216ENST00000541922 PIK3C2GO75747 1445 aa32.43■■■□□ 2.78
C2CD3-216ENST00000541922 MST1RQ04912 1400 aa32.42■■■□□ 2.78
C2CD3-216ENST00000541922 BRINP3Q76B58 766 aa32.4■■■□□ 2.78
C2CD3-216ENST00000541922 COL16A1Q07092 1604 aaPredicted RBP32.38■■■□□ 2.77
C2CD3-216ENST00000541922 AHDC1Q5TGY3 1603 aaPredicted RBP32.38■■■□□ 2.77
C2CD3-216ENST00000541922 MYOM2P54296 1465 aa32.38■■■□□ 2.77
C2CD3-216ENST00000541922 STK26Q9P289 416 aa32.37■■■□□ 2.77
C2CD3-216ENST00000541922 TMEM132EQ6IEE7 984 aa32.36■■■□□ 2.77
C2CD3-216ENST00000541922 LRPPRCP42704 1394 aaKnown RBP32.35■■■□□ 2.77
C2CD3-216ENST00000541922 JCADQ9P266 1359 aa32.35■■■□□ 2.77
C2CD3-216ENST00000541922 ASXL1Q8IXJ9 1541 aa32.35■■■□□ 2.77
C2CD3-216ENST00000541922 NRXN1Q9ULB1 1477 aa32.35■■■□□ 2.77
C2CD3-216ENST00000541922 C14orf93Q9H972 538 aaKnown RBP32.33■■■□□ 2.77
C2CD3-216ENST00000541922 TECPR2O15040 1411 aa32.33■■■□□ 2.77
C2CD3-216ENST00000541922 ABCC11Q96J66 1382 aa32.32■■■□□ 2.76
C2CD3-216ENST00000541922 LAMC1P11047 1609 aa32.31■■■□□ 2.76
C2CD3-216ENST00000541922 KNDC1Q76NI1 1749 aa32.31■■■□□ 2.76
C2CD3-216ENST00000541922 YTHDC2Q9H6S0 1430 aaKnown RBP32.29■■■□□ 2.76
C2CD3-216ENST00000541922 CFAP70Q5T0N1 1121 aa32.29■■■□□ 2.76
C2CD3-216ENST00000541922 C1orf167Q5SNV9 1468 aa32.29■■■□□ 2.76
C2CD3-216ENST00000541922 NHSL1Q5SYE7 1610 aa32.27■■■□□ 2.76
C2CD3-216ENST00000541922 WAPLQ7Z5K2 1190 aa32.26■■■□□ 2.75
C2CD3-216ENST00000541922 DHX57Q6P158 1386 aaKnown RBP32.25■■■□□ 2.75
C2CD3-216ENST00000541922 SOCS7O14512 581 aa32.25■■■□□ 2.75
C2CD3-216ENST00000541922 DCAF11Q8TEB1 546 aa32.25■■■□□ 2.75
C2CD3-216ENST00000541922 KDM2AQ9Y2K7 1162 aa32.24■■■□□ 2.75
C2CD3-216ENST00000541922 CDC42BPGQ6DT37 1551 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms