RNA–Protein interactions for RNA: ENST00000540740.5

PTPN6-214, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-214ENST00000540740 TRPM2O94759 1503 aa17.17■□□□□ 0.34
PTPN6-214ENST00000540740 PPP1R15AO75807 674 aaPredicted RBP17.17■□□□□ 0.34
PTPN6-214ENST00000540740 BCANQ96GW7 911 aa17.16■□□□□ 0.34
PTPN6-214ENST00000540740 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
PTPN6-214ENST00000540740 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
PTPN6-214ENST00000540740 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-214ENST00000540740 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
PTPN6-214ENST00000540740 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
PTPN6-214ENST00000540740 KIF1BO60333 1816 aa17.12■□□□□ 0.33
PTPN6-214ENST00000540740 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
PTPN6-214ENST00000540740 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
PTPN6-214ENST00000540740 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
PTPN6-214ENST00000540740 NWD1Q149M9 1564 aa17.11■□□□□ 0.33
PTPN6-214ENST00000540740 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPN6-214ENST00000540740 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
PTPN6-214ENST00000540740 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
PTPN6-214ENST00000540740 ZNF326Q5BKZ1 582 aaKnown RBP17.09■□□□□ 0.33
PTPN6-214ENST00000540740 TOM1O60784 492 aa17.08■□□□□ 0.32
PTPN6-214ENST00000540740 FOXD1Q16676 465 aa17.08■□□□□ 0.32
PTPN6-214ENST00000540740 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
PTPN6-214ENST00000540740 SETD5Q9C0A6 1442 aa17.07■□□□□ 0.32
PTPN6-214ENST00000540740 CHD2O14647 1828 aaKnown RBP17.07■□□□□ 0.32
PTPN6-214ENST00000540740 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
PTPN6-214ENST00000540740 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
PTPN6-214ENST00000540740 ADAMTS13Q76LX8 1427 aa17.06■□□□□ 0.32
PTPN6-214ENST00000540740 KCNA6P17658 529 aa17.06■□□□□ 0.32
PTPN6-214ENST00000540740 NRXN3Q9Y4C0 1643 aa17.06■□□□□ 0.32
PTPN6-214ENST00000540740 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
PTPN6-214ENST00000540740 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
PTPN6-214ENST00000540740 RAB3GAP2Q9H2M9 1393 aa17.03■□□□□ 0.32
PTPN6-214ENST00000540740 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
PTPN6-214ENST00000540740 MPHOSPH9Q99550 1183 aa17.03■□□□□ 0.32
PTPN6-214ENST00000540740 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
PTPN6-214ENST00000540740 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
PTPN6-214ENST00000540740 CCDC144AA2RUR9 1427 aa17■□□□□ 0.31
PTPN6-214ENST00000540740 PPLO60437 1756 aa17■□□□□ 0.31
PTPN6-214ENST00000540740 HSPA1LP34931 641 aa16.98■□□□□ 0.31
PTPN6-214ENST00000540740 PTPRUQ92729 1446 aa16.97■□□□□ 0.31
PTPN6-214ENST00000540740 PIK3R4Q99570 1358 aa16.97■□□□□ 0.31
PTPN6-214ENST00000540740 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.31
PTPN6-214ENST00000540740 MSH6P52701 1360 aa16.95■□□□□ 0.3
PTPN6-214ENST00000540740 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
PTPN6-214ENST00000540740 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
PTPN6-214ENST00000540740 METP08581 1390 aa16.94■□□□□ 0.3
PTPN6-214ENST00000540740 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
PTPN6-214ENST00000540740 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
PTPN6-214ENST00000540740 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
PTPN6-214ENST00000540740 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
PTPN6-214ENST00000540740 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
PTPN6-214ENST00000540740 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
PTPN6-214ENST00000540740 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
PTPN6-214ENST00000540740 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
PTPN6-214ENST00000540740 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
PTPN6-214ENST00000540740 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
PTPN6-214ENST00000540740 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
PTPN6-214ENST00000540740 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
PTPN6-214ENST00000540740 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
PTPN6-214ENST00000540740 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
PTPN6-214ENST00000540740 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
PTPN6-214ENST00000540740 ANKRD30BQ9BXX2 1392 aa16.85■□□□□ 0.29
PTPN6-214ENST00000540740 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
PTPN6-214ENST00000540740 ATF3P18847 181 aa16.83■□□□□ 0.28
PTPN6-214ENST00000540740 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
PTPN6-214ENST00000540740 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
PTPN6-214ENST00000540740 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
PTPN6-214ENST00000540740 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
PTPN6-214ENST00000540740 ADGRL3Q9HAR2 1447 aa16.81■□□□□ 0.28
PTPN6-214ENST00000540740 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
PTPN6-214ENST00000540740 HRCP23327 699 aa16.81■□□□□ 0.28
PTPN6-214ENST00000540740 CADPS2Q86UW7 1296 aa16.81■□□□□ 0.28
PTPN6-214ENST00000540740 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
PTPN6-214ENST00000540740 DCCP43146 1447 aa16.8■□□□□ 0.28
PTPN6-214ENST00000540740 MYOM2P54296 1465 aa16.8■□□□□ 0.28
PTPN6-214ENST00000540740 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
PTPN6-214ENST00000540740 LAMC1P11047 1609 aa16.78■□□□□ 0.28
PTPN6-214ENST00000540740 KNDC1Q76NI1 1749 aa16.77■□□□□ 0.28
PTPN6-214ENST00000540740 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
PTPN6-214ENST00000540740 MST1RQ04912 1400 aa16.77■□□□□ 0.27
PTPN6-214ENST00000540740 STK26Q9P289 416 aa16.76■□□□□ 0.27
PTPN6-214ENST00000540740 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
PTPN6-214ENST00000540740 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
PTPN6-214ENST00000540740 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
PTPN6-214ENST00000540740 ILDR2Q71H61 639 aa16.74■□□□□ 0.27
PTPN6-214ENST00000540740 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
PTPN6-214ENST00000540740 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
PTPN6-214ENST00000540740 TECPR2O15040 1411 aa16.72■□□□□ 0.27
PTPN6-214ENST00000540740 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
PTPN6-214ENST00000540740 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
PTPN6-214ENST00000540740 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
PTPN6-214ENST00000540740 PHF23Q9BUL5 403 aaPredicted RBP16.71■□□□□ 0.27
PTPN6-214ENST00000540740 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
PTPN6-214ENST00000540740 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
PTPN6-214ENST00000540740 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
PTPN6-214ENST00000540740 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
PTPN6-214ENST00000540740 C14orf93Q9H972 538 aaKnown RBP16.7■□□□□ 0.26
PTPN6-214ENST00000540740 C1orf167Q5SNV9 1468 aa16.69■□□□□ 0.26
PTPN6-214ENST00000540740 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
PTPN6-214ENST00000540740 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
PTPN6-214ENST00000540740 JCADQ9P266 1359 aa16.68■□□□□ 0.26
PTPN6-214ENST00000540740 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms