RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
CCDC130-202ENST00000540216 CPS1P31327 1500 aa19.92■□□□□ 0.78
CCDC130-202ENST00000540216 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCDC130-202ENST00000540216 HRCP23327 699 aa19.9■□□□□ 0.78
CCDC130-202ENST00000540216 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
CCDC130-202ENST00000540216 ILDR1Q86SU0 546 aaPredicted RBP19.89■□□□□ 0.77
CCDC130-202ENST00000540216 PLEKHG1Q9ULL1 1385 aa19.89■□□□□ 0.77
CCDC130-202ENST00000540216 KIF1BO60333 1816 aa19.88■□□□□ 0.77
CCDC130-202ENST00000540216 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
CCDC130-202ENST00000540216 CCDC144AA2RUR9 1427 aa19.84■□□□□ 0.77
CCDC130-202ENST00000540216 DIP2AQ14689 1571 aa19.83■□□□□ 0.76
CCDC130-202ENST00000540216 FOXD1Q16676 465 aa19.82■□□□□ 0.76
CCDC130-202ENST00000540216 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
CCDC130-202ENST00000540216 STRCP1A6NGW2 1772 aa19.81■□□□□ 0.76
CCDC130-202ENST00000540216 BCANQ96GW7 911 aa19.81■□□□□ 0.76
CCDC130-202ENST00000540216 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
CCDC130-202ENST00000540216 SLC26A8Q96RN1 970 aa19.8■□□□□ 0.76
CCDC130-202ENST00000540216 NWD1Q149M9 1564 aa19.78■□□□□ 0.76
CCDC130-202ENST00000540216 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
CCDC130-202ENST00000540216 TBX22Q9Y458 520 aa19.78■□□□□ 0.76
CCDC130-202ENST00000540216 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
CCDC130-202ENST00000540216 ADAMTS13Q76LX8 1427 aa19.77■□□□□ 0.76
CCDC130-202ENST00000540216 LRRC7Q96NW7 1537 aa19.77■□□□□ 0.76
CCDC130-202ENST00000540216 KCNA6P17658 529 aa19.77■□□□□ 0.76
CCDC130-202ENST00000540216 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
CCDC130-202ENST00000540216 NKTRP30414 1462 aaKnown RBP19.77■□□□□ 0.76
CCDC130-202ENST00000540216 PIK3R4Q99570 1358 aa19.75■□□□□ 0.75
CCDC130-202ENST00000540216 SPATA31E1Q6ZUB1 1445 aa19.75■□□□□ 0.75
CCDC130-202ENST00000540216 VGFO15240 615 aaPredicted RBP19.74■□□□□ 0.75
CCDC130-202ENST00000540216 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
CCDC130-202ENST00000540216 CHD2O14647 1828 aaKnown RBP19.73■□□□□ 0.75
CCDC130-202ENST00000540216 PPLO60437 1756 aa19.72■□□□□ 0.75
CCDC130-202ENST00000540216 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
CCDC130-202ENST00000540216 UBAP1LF5GYI3 381 aa19.7■□□□□ 0.74
CCDC130-202ENST00000540216 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
CCDC130-202ENST00000540216 TOM1O60784 492 aa19.68■□□□□ 0.74
CCDC130-202ENST00000540216 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
CCDC130-202ENST00000540216 TMEM94Q12767 1356 aa19.67■□□□□ 0.74
CCDC130-202ENST00000540216 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
CCDC130-202ENST00000540216 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
CCDC130-202ENST00000540216 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
CCDC130-202ENST00000540216 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
CCDC130-202ENST00000540216 NCOA3Q9Y6Q9 1424 aa19.64■□□□□ 0.73
CCDC130-202ENST00000540216 XRN1Q8IZH2 1706 aaKnown RBP19.64■□□□□ 0.73
CCDC130-202ENST00000540216 SETD1AO15047 1707 aaKnown RBP19.62■□□□□ 0.73
CCDC130-202ENST00000540216 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
CCDC130-202ENST00000540216 PTPRUQ92729 1446 aa19.62■□□□□ 0.73
CCDC130-202ENST00000540216 METP08581 1390 aa19.62■□□□□ 0.73
CCDC130-202ENST00000540216 MYOM2P54296 1465 aa19.61■□□□□ 0.73
CCDC130-202ENST00000540216 AMOTL2Q9Y2J4 779 aa19.61■□□□□ 0.73
CCDC130-202ENST00000540216 MSH6P52701 1360 aa19.59■□□□□ 0.73
CCDC130-202ENST00000540216 ADGRF5Q8IZF2 1346 aa19.59■□□□□ 0.73
CCDC130-202ENST00000540216 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
CCDC130-202ENST00000540216 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
CCDC130-202ENST00000540216 NRXN1Q9ULB1 1477 aa19.57■□□□□ 0.72
CCDC130-202ENST00000540216 STAC3Q96MF2 364 aa19.56■□□□□ 0.72
CCDC130-202ENST00000540216 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
CCDC130-202ENST00000540216 LAMC1P11047 1609 aa19.55■□□□□ 0.72
CCDC130-202ENST00000540216 PIP4K2BP78356 416 aa19.55■□□□□ 0.72
CCDC130-202ENST00000540216 PTCH1Q13635 1447 aa19.55■□□□□ 0.72
CCDC130-202ENST00000540216 RBM33Q96EV2 1170 aaKnown RBP19.54■□□□□ 0.72
CCDC130-202ENST00000540216 C14orf37Q86TY3 774 aa19.53■□□□□ 0.72
CCDC130-202ENST00000540216 DCCP43146 1447 aa19.52■□□□□ 0.72
CCDC130-202ENST00000540216 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
CCDC130-202ENST00000540216 FAM135BQ49AJ0 1406 aa19.5■□□□□ 0.71
CCDC130-202ENST00000540216 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
CCDC130-202ENST00000540216 CADPS2Q86UW7 1296 aa19.49■□□□□ 0.71
CCDC130-202ENST00000540216 C14orf93Q9H972 538 aaKnown RBP19.49■□□□□ 0.71
CCDC130-202ENST00000540216 TECPR2O15040 1411 aa19.49■□□□□ 0.71
CCDC130-202ENST00000540216 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
CCDC130-202ENST00000540216 LRPPRCP42704 1394 aaKnown RBP19.48■□□□□ 0.71
CCDC130-202ENST00000540216 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
CCDC130-202ENST00000540216 DHX57Q6P158 1386 aaKnown RBP19.47■□□□□ 0.71
CCDC130-202ENST00000540216 ROBO2Q9HCK4 1378 aa19.47■□□□□ 0.71
CCDC130-202ENST00000540216 ATF3P18847 181 aa19.47■□□□□ 0.71
CCDC130-202ENST00000540216 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
CCDC130-202ENST00000540216 KNDC1Q76NI1 1749 aa19.47■□□□□ 0.71
CCDC130-202ENST00000540216 SLAIN2Q9P270 581 aa19.46■□□□□ 0.71
CCDC130-202ENST00000540216 ABCC11Q96J66 1382 aa19.45■□□□□ 0.7
CCDC130-202ENST00000540216 HSPA1LP34931 641 aa19.45■□□□□ 0.7
CCDC130-202ENST00000540216 NALCNQ8IZF0 1738 aa19.45■□□□□ 0.7
CCDC130-202ENST00000540216 YTHDC2Q9H6S0 1430 aaKnown RBP19.44■□□□□ 0.7
CCDC130-202ENST00000540216 ROBO1Q9Y6N7 1651 aa19.44■□□□□ 0.7
CCDC130-202ENST00000540216 CFAP70Q5T0N1 1121 aa19.43■□□□□ 0.7
CCDC130-202ENST00000540216 KDM2AQ9Y2K7 1162 aa19.43■□□□□ 0.7
CCDC130-202ENST00000540216 TMEM132EQ6IEE7 984 aa19.42■□□□□ 0.7
CCDC130-202ENST00000540216 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
CCDC130-202ENST00000540216 SIRT1Q96EB6 747 aa19.4■□□□□ 0.7
CCDC130-202ENST00000540216 STK26Q9P289 416 aa19.4■□□□□ 0.7
CCDC130-202ENST00000540216 MST1RQ04912 1400 aa19.39■□□□□ 0.69
CCDC130-202ENST00000540216 CDC42BPGQ6DT37 1551 aa19.38■□□□□ 0.69
CCDC130-202ENST00000540216 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
CCDC130-202ENST00000540216 KIAA1210Q9ULL0 1709 aa19.37■□□□□ 0.69
CCDC130-202ENST00000540216 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
CCDC130-202ENST00000540216 AHDC1Q5TGY3 1603 aaPredicted RBP19.33■□□□□ 0.69
CCDC130-202ENST00000540216 WAPLQ7Z5K2 1190 aa19.33■□□□□ 0.68
CCDC130-202ENST00000540216 PLEKHH1Q9ULM0 1364 aa19.32■□□□□ 0.68
CCDC130-202ENST00000540216 PHLPP1O60346 1717 aa19.32■□□□□ 0.68
CCDC130-202ENST00000540216 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
CCDC130-202ENST00000540216 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms