RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 ANKK1Q8NFD2 765 aa7.54□□□□□ -1.2
C2CD3-214ENST00000540057 KCNV2Q8TDN2 545 aa7.54□□□□□ -1.2
C2CD3-214ENST00000540057 ZFRQ96KR1 1074 aaKnown RBP7.54□□□□□ -1.2
C2CD3-214ENST00000540057 CCDC88BA6NC98 1476 aa7.54□□□□□ -1.2
C2CD3-214ENST00000540057 MAGI1Q96QZ7 1491 aaPredicted RBP7.54□□□□□ -1.2
C2CD3-214ENST00000540057 SOGA1O94964 1423 aa7.53□□□□□ -1.2
C2CD3-214ENST00000540057 SOWAHBA6NEL2 793 aa7.53□□□□□ -1.2
C2CD3-214ENST00000540057 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
C2CD3-214ENST00000540057 ERCC6L2Q5T890 1561 aa7.52□□□□□ -1.21
C2CD3-214ENST00000540057 SYNJ2O15056 1496 aa7.52□□□□□ -1.21
C2CD3-214ENST00000540057 C3orf80F5H4A9 247 aa7.52□□□□□ -1.21
C2CD3-214ENST00000540057 FAM98CQ17RN3 349 aaKnown RBP7.52□□□□□ -1.21
C2CD3-214ENST00000540057 PRSS12P56730 875 aa7.51□□□□□ -1.21
C2CD3-214ENST00000540057 CDCA7LQ96GN5 454 aa7.51□□□□□ -1.21
C2CD3-214ENST00000540057 GRIN2BQ13224 1484 aa7.5□□□□□ -1.21
C2CD3-214ENST00000540057 IFFO2Q5TF58 517 aa7.5□□□□□ -1.21
C2CD3-214ENST00000540057 ARHGEF1Q92888 912 aaKnown RBP7.5□□□□□ -1.21
C2CD3-214ENST00000540057 MLLT3P42568 568 aaPredicted RBP7.49□□□□□ -1.21
C2CD3-214ENST00000540057 CERKQ8TCT0 537 aa7.49□□□□□ -1.21
C2CD3-214ENST00000540057 SMAPO00193 183 aa7.48□□□□□ -1.21
C2CD3-214ENST00000540057 PACS2Q86VP3 889 aa7.48□□□□□ -1.21
C2CD3-214ENST00000540057 NPDC1Q9NQX5 325 aaPredicted RBP7.48□□□□□ -1.21
C2CD3-214ENST00000540057 WBP1LQ9NX94 342 aa7.48□□□□□ -1.21
C2CD3-214ENST00000540057 FGD5Q6ZNL6 1462 aa7.48□□□□□ -1.21
C2CD3-214ENST00000540057 TTC13Q8NBP0 860 aa7.47□□□□□ -1.21
C2CD3-214ENST00000540057 RBM27Q9P2N5 1060 aaKnown RBP7.47□□□□□ -1.21
C2CD3-214ENST00000540057 ITGBL1O95965 494 aaPredicted RBP7.46□□□□□ -1.22
C2CD3-214ENST00000540057 PLCB2Q00722 1185 aa7.46□□□□□ -1.22
C2CD3-214ENST00000540057 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.46□□□□□ -1.22
C2CD3-214ENST00000540057 PBRM1Q86U86 1689 aa7.46□□□□□ -1.22
C2CD3-214ENST00000540057 CEP170Q5SW79 1584 aa7.46□□□□□ -1.22
C2CD3-214ENST00000540057 A0A0G2JS52 829 aa7.45□□□□□ -1.22
C2CD3-214ENST00000540057 FAM69CQ0P6D2 419 aa7.45□□□□□ -1.22
C2CD3-214ENST00000540057 TATDN2Q93075 761 aa7.45□□□□□ -1.22
C2CD3-214ENST00000540057 LRCH3Q96II8 777 aa7.45□□□□□ -1.22
C2CD3-214ENST00000540057 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
C2CD3-214ENST00000540057 ABCC10Q5T3U5 1492 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 NBPF26B4DH59 902 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 PADI6Q6TGC4 694 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 TSR3Q9UJK0 312 aaKnown RBP7.44□□□□□ -1.22
C2CD3-214ENST00000540057 PNMA3Q9UL41 463 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 KDM6BO15054 1643 aa7.44□□□□□ -1.22
C2CD3-214ENST00000540057 SAMD7Q7Z3H4 446 aa7.43□□□□□ -1.22
C2CD3-214ENST00000540057 SHROOM2Q13796 1616 aa7.42□□□□□ -1.22
C2CD3-214ENST00000540057 NUDT18Q6ZVK8 323 aa7.42□□□□□ -1.22
C2CD3-214ENST00000540057 CUX1P39880 1505 aa7.42□□□□□ -1.22
C2CD3-214ENST00000540057 DIP2BQ9P265 1576 aa7.42□□□□□ -1.22
C2CD3-214ENST00000540057 HECW2Q9P2P5 1572 aa7.42□□□□□ -1.22
C2CD3-214ENST00000540057 NUP160Q12769 1436 aa7.41□□□□□ -1.22
C2CD3-214ENST00000540057 GRIN2AQ12879 1464 aa7.41□□□□□ -1.22
C2CD3-214ENST00000540057 P3H3Q8IVL6 736 aa7.4□□□□□ -1.22
C2CD3-214ENST00000540057 TSPOAP1O95153 1857 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 ABCA5Q8WWZ7 1642 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 MAPKBP1O60336 1514 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 ADGRL1O94910 1474 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 SEMA3EO15041 775 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 PTGDRQ13258 359 aa7.39□□□□□ -1.23
C2CD3-214ENST00000540057 FBXO41Q8TF61 875 aa7.38□□□□□ -1.23
C2CD3-214ENST00000540057 EYA1Q99502 592 aa7.38□□□□□ -1.23
C2CD3-214ENST00000540057 RGS20O76081 388 aa7.37□□□□□ -1.23
C2CD3-214ENST00000540057 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
C2CD3-214ENST00000540057 PRG4Q92954 1404 aaPredicted RBP7.36□□□□□ -1.23
C2CD3-214ENST00000540057 PPP4CP60510 307 aa7.36□□□□□ -1.23
C2CD3-214ENST00000540057 ADAMTS12P58397 1594 aa7.36□□□□□ -1.23
C2CD3-214ENST00000540057 KCNC4Q03721 635 aa7.35□□□□□ -1.23
C2CD3-214ENST00000540057 TJAP1Q5JTD0 557 aa7.35□□□□□ -1.23
C2CD3-214ENST00000540057 SWT1Q5T5J6 900 aaKnown RBP7.35□□□□□ -1.23
C2CD3-214ENST00000540057 ADCY10Q96PN6 1610 aa7.34□□□□□ -1.23
C2CD3-214ENST00000540057 TESPA1A2RU30 521 aaPredicted RBP7.34□□□□□ -1.23
C2CD3-214ENST00000540057 APLP1P51693 650 aa7.33□□□□□ -1.24
C2CD3-214ENST00000540057 ADGRG1Q9Y653 693 aa7.33□□□□□ -1.24
C2CD3-214ENST00000540057 NUTM2FA1L443 756 aa7.32□□□□□ -1.24
C2CD3-214ENST00000540057 RNF40O75150 1001 aa7.32□□□□□ -1.24
C2CD3-214ENST00000540057 MTRQ99707 1265 aa7.32□□□□□ -1.24
C2CD3-214ENST00000540057 FHAD1B1AJZ9 1412 aa7.32□□□□□ -1.24
C2CD3-214ENST00000540057 FAM161AQ3B820 660 aa7.31□□□□□ -1.24
C2CD3-214ENST00000540057 KDM2AQ9Y2K7 1162 aa7.31□□□□□ -1.24
C2CD3-214ENST00000540057 GPR37O15354 613 aa7.3□□□□□ -1.24
C2CD3-214ENST00000540057 FCHSD2O94868 740 aa7.3□□□□□ -1.24
C2CD3-214ENST00000540057 HAP1P54257 671 aaPredicted RBP7.3□□□□□ -1.24
C2CD3-214ENST00000540057 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
C2CD3-214ENST00000540057 PPRC1Q5VV67 1664 aaKnown RBP7.3□□□□□ -1.24
C2CD3-214ENST00000540057 LMTK3Q96Q04 1460 aa7.3□□□□□ -1.24
C2CD3-214ENST00000540057 TMEM134Q9H6X4 195 aa7.29□□□□□ -1.24
C2CD3-214ENST00000540057 IL21Q9HBE4 155 aa7.29□□□□□ -1.24
C2CD3-214ENST00000540057 COL17A1Q9UMD9 1497 aaPredicted RBP7.29□□□□□ -1.24
C2CD3-214ENST00000540057 DNAJB2P25686 324 aa7.28□□□□□ -1.24
C2CD3-214ENST00000540057 HDGFP51858 240 aaKnown RBP7.28□□□□□ -1.24
C2CD3-214ENST00000540057 RBM26Q5T8P6 1007 aaKnown RBP7.28□□□□□ -1.24
C2CD3-214ENST00000540057 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
C2CD3-214ENST00000540057 RCCD1A6NED2 376 aa7.27□□□□□ -1.25
C2CD3-214ENST00000540057 RBM46Q8TBY0 533 aaKnown RBP7.27□□□□□ -1.25
C2CD3-214ENST00000540057 RUSC2Q8N2Y8 1516 aa7.27□□□□□ -1.25
C2CD3-214ENST00000540057 ERICH3Q5RHP9 1530 aa7.26□□□□□ -1.25
C2CD3-214ENST00000540057 SOCS7O14512 581 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 FECHP22830 423 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 HIC1Q14526 733 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 ILDR2Q71H61 639 aa7.25□□□□□ -1.25
C2CD3-214ENST00000540057 PXYLP1Q8TE99 480 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms