RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 KIF1BO60333 1816 aa16.2■□□□□ 0.18
SLC3A2-215ENST00000539891 PLEKHG1Q9ULL1 1385 aa16.19■□□□□ 0.18
SLC3A2-215ENST00000539891 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
SLC3A2-215ENST00000539891 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
SLC3A2-215ENST00000539891 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
SLC3A2-215ENST00000539891 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
SLC3A2-215ENST00000539891 SETD5Q9C0A6 1442 aa16.18■□□□□ 0.18
SLC3A2-215ENST00000539891 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
SLC3A2-215ENST00000539891 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
SLC3A2-215ENST00000539891 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
SLC3A2-215ENST00000539891 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
SLC3A2-215ENST00000539891 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
SLC3A2-215ENST00000539891 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
SLC3A2-215ENST00000539891 KCNA6P17658 529 aa16.14■□□□□ 0.17
SLC3A2-215ENST00000539891 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
SLC3A2-215ENST00000539891 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
SLC3A2-215ENST00000539891 TBX22Q9Y458 520 aa16.13■□□□□ 0.17
SLC3A2-215ENST00000539891 BCANQ96GW7 911 aa16.12■□□□□ 0.17
SLC3A2-215ENST00000539891 ADAMTS13Q76LX8 1427 aa16.12■□□□□ 0.17
SLC3A2-215ENST00000539891 TOM1O60784 492 aa16.11■□□□□ 0.17
SLC3A2-215ENST00000539891 NEXMIFQ5QGS0 1516 aa16.11■□□□□ 0.17
SLC3A2-215ENST00000539891 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
SLC3A2-215ENST00000539891 ALKQ9UM73 1620 aa16.1■□□□□ 0.17
SLC3A2-215ENST00000539891 NKTRP30414 1462 aaKnown RBP16.1■□□□□ 0.17
SLC3A2-215ENST00000539891 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
SLC3A2-215ENST00000539891 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
SLC3A2-215ENST00000539891 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
SLC3A2-215ENST00000539891 ZNF326Q5BKZ1 582 aaKnown RBP16.09■□□□□ 0.17
SLC3A2-215ENST00000539891 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
SLC3A2-215ENST00000539891 HRCP23327 699 aa16.08■□□□□ 0.16
SLC3A2-215ENST00000539891 FOXD1Q16676 465 aa16.08■□□□□ 0.16
SLC3A2-215ENST00000539891 PPLO60437 1756 aa16.08■□□□□ 0.16
SLC3A2-215ENST00000539891 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
SLC3A2-215ENST00000539891 RPGRIP1LQ68CZ1 1315 aa16.06■□□□□ 0.16
SLC3A2-215ENST00000539891 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
SLC3A2-215ENST00000539891 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
SLC3A2-215ENST00000539891 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
SLC3A2-215ENST00000539891 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.16
SLC3A2-215ENST00000539891 NCOA3Q9Y6Q9 1424 aa16.02■□□□□ 0.16
SLC3A2-215ENST00000539891 VGFO15240 615 aaPredicted RBP16.02■□□□□ 0.16
SLC3A2-215ENST00000539891 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.15
SLC3A2-215ENST00000539891 IFT172Q9UG01 1749 aa16.02■□□□□ 0.15
SLC3A2-215ENST00000539891 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
SLC3A2-215ENST00000539891 SETD1AO15047 1707 aaKnown RBP16.01■□□□□ 0.15
SLC3A2-215ENST00000539891 PTPRUQ92729 1446 aa16.01■□□□□ 0.15
SLC3A2-215ENST00000539891 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
SLC3A2-215ENST00000539891 AMOTL2Q9Y2J4 779 aa15.98■□□□□ 0.15
SLC3A2-215ENST00000539891 METP08581 1390 aa15.98■□□□□ 0.15
SLC3A2-215ENST00000539891 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
SLC3A2-215ENST00000539891 MSH6P52701 1360 aa15.96■□□□□ 0.15
SLC3A2-215ENST00000539891 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
SLC3A2-215ENST00000539891 HSPA1LP34931 641 aa15.95■□□□□ 0.14
SLC3A2-215ENST00000539891 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.95■□□□□ 0.14
SLC3A2-215ENST00000539891 FAM135BQ49AJ0 1406 aa15.95■□□□□ 0.14
SLC3A2-215ENST00000539891 RGL3Q3MIN7 710 aa15.94■□□□□ 0.14
SLC3A2-215ENST00000539891 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
SLC3A2-215ENST00000539891 ROBO1Q9Y6N7 1651 aa15.92■□□□□ 0.14
SLC3A2-215ENST00000539891 ADGRF5Q8IZF2 1346 aa15.92■□□□□ 0.14
SLC3A2-215ENST00000539891 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
SLC3A2-215ENST00000539891 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 SLAIN2Q9P270 581 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 MYOM2P54296 1465 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
SLC3A2-215ENST00000539891 DCCP43146 1447 aa15.89■□□□□ 0.13
SLC3A2-215ENST00000539891 CADPS2Q86UW7 1296 aa15.89■□□□□ 0.13
SLC3A2-215ENST00000539891 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
SLC3A2-215ENST00000539891 LAMC1P11047 1609 aa15.86■□□□□ 0.13
SLC3A2-215ENST00000539891 ADGRL3Q9HAR2 1447 aa15.86■□□□□ 0.13
SLC3A2-215ENST00000539891 ATF3P18847 181 aa15.86■□□□□ 0.13
SLC3A2-215ENST00000539891 KNDC1Q76NI1 1749 aa15.85■□□□□ 0.13
SLC3A2-215ENST00000539891 ASXL1Q8IXJ9 1541 aa15.85■□□□□ 0.13
SLC3A2-215ENST00000539891 ROBO2Q9HCK4 1378 aa15.85■□□□□ 0.13
SLC3A2-215ENST00000539891 TECPR2O15040 1411 aa15.84■□□□□ 0.13
SLC3A2-215ENST00000539891 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
SLC3A2-215ENST00000539891 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
SLC3A2-215ENST00000539891 C14orf93Q9H972 538 aaKnown RBP15.83■□□□□ 0.12
SLC3A2-215ENST00000539891 LRPPRCP42704 1394 aaKnown RBP15.82■□□□□ 0.12
SLC3A2-215ENST00000539891 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
SLC3A2-215ENST00000539891 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
SLC3A2-215ENST00000539891 MST1RQ04912 1400 aa15.82■□□□□ 0.12
SLC3A2-215ENST00000539891 MED1Q15648 1581 aaPredicted RBP15.81■□□□□ 0.12
SLC3A2-215ENST00000539891 AHDC1Q5TGY3 1603 aaPredicted RBP15.8■□□□□ 0.12
SLC3A2-215ENST00000539891 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
SLC3A2-215ENST00000539891 DHX57Q6P158 1386 aaKnown RBP15.79■□□□□ 0.12
SLC3A2-215ENST00000539891 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
SLC3A2-215ENST00000539891 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
SLC3A2-215ENST00000539891 CFAP70Q5T0N1 1121 aa15.78■□□□□ 0.12
SLC3A2-215ENST00000539891 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
SLC3A2-215ENST00000539891 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
SLC3A2-215ENST00000539891 DCAF11Q8TEB1 546 aa15.77■□□□□ 0.12
SLC3A2-215ENST00000539891 ADGRB1O14514 1584 aa15.77■□□□□ 0.11
SLC3A2-215ENST00000539891 CDC42BPGQ6DT37 1551 aa15.77■□□□□ 0.11
SLC3A2-215ENST00000539891 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
SLC3A2-215ENST00000539891 STK26Q9P289 416 aa15.76■□□□□ 0.11
SLC3A2-215ENST00000539891 C1orf167Q5SNV9 1468 aa15.75■□□□□ 0.11
SLC3A2-215ENST00000539891 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
SLC3A2-215ENST00000539891 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
SLC3A2-215ENST00000539891 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms