RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PLEKHG1Q9ULL1 1385 aa33.71■■■□□ 2.99
SCARB1-206ENST00000539320 NAIPQ13075 1403 aa33.7■■■□□ 2.98
SCARB1-206ENST00000539320 CHGAP10645 457 aaKnown RBP33.69■■■□□ 2.98
SCARB1-206ENST00000539320 HSPA1LP34931 641 aa33.69■■■□□ 2.98
SCARB1-206ENST00000539320 XIRP1Q702N8 1843 aaKnown RBP33.69■■■□□ 2.98
SCARB1-206ENST00000539320 NWD1Q149M9 1564 aa33.68■■■□□ 2.98
SCARB1-206ENST00000539320 PPP1R15AO75807 674 aaPredicted RBP33.68■■■□□ 2.98
SCARB1-206ENST00000539320 KCNA6P17658 529 aa33.67■■■□□ 2.98
SCARB1-206ENST00000539320 HDGFP51858 240 aaKnown RBP33.66■■■□□ 2.98
SCARB1-206ENST00000539320 SPHKAPQ2M3C7 1700 aa33.66■■■□□ 2.98
SCARB1-206ENST00000539320 BCANQ96GW7 911 aa33.66■■■□□ 2.98
SCARB1-206ENST00000539320 NKTRP30414 1462 aaKnown RBP33.65■■■□□ 2.98
SCARB1-206ENST00000539320 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.63■■■□□ 2.97
SCARB1-206ENST00000539320 TMEM94Q12767 1356 aa33.62■■■□□ 2.97
SCARB1-206ENST00000539320 HFM1A2PYH4 1435 aa33.62■■■□□ 2.97
SCARB1-206ENST00000539320 SENP3Q9H4L4 574 aaPredicted RBP33.59■■■□□ 2.97
SCARB1-206ENST00000539320 DIP2AQ14689 1571 aa33.55■■■□□ 2.96
SCARB1-206ENST00000539320 PROSER2Q86WR7 435 aaPredicted RBP33.55■■■□□ 2.96
SCARB1-206ENST00000539320 ADAMTS13Q76LX8 1427 aa33.53■■■□□ 2.96
SCARB1-206ENST00000539320 NUTM2DQ5VT03 806 aaPredicted RBP33.53■■■□□ 2.96
SCARB1-206ENST00000539320 CHD2O14647 1828 aaKnown RBP33.53■■■□□ 2.96
SCARB1-206ENST00000539320 TRPM2O94759 1503 aa33.53■■■□□ 2.96
SCARB1-206ENST00000539320 TBX22Q9Y458 520 aa33.51■■■□□ 2.95
SCARB1-206ENST00000539320 CLTCL1P53675 1640 aa33.5■■■□□ 2.95
SCARB1-206ENST00000539320 MED1Q15648 1581 aaPredicted RBP33.49■■■□□ 2.95
SCARB1-206ENST00000539320 ILDR2Q71H61 639 aa33.49■■■□□ 2.95
SCARB1-206ENST00000539320 RBM33Q96EV2 1170 aaKnown RBP33.47■■■□□ 2.95
SCARB1-206ENST00000539320 TRIM52Q96A61 297 aa33.45■■■□□ 2.95
SCARB1-206ENST00000539320 PIK3R4Q99570 1358 aa33.45■■■□□ 2.94
SCARB1-206ENST00000539320 MSH6P52701 1360 aa33.44■■■□□ 2.94
SCARB1-206ENST00000539320 FAM135BQ49AJ0 1406 aa33.43■■■□□ 2.94
SCARB1-206ENST00000539320 ZNF326Q5BKZ1 582 aaKnown RBP33.41■■■□□ 2.94
SCARB1-206ENST00000539320 SETBP1Q9Y6X0 1596 aa33.4■■■□□ 2.94
SCARB1-206ENST00000539320 NRXN3Q9Y4C0 1643 aa33.39■■■□□ 2.94
SCARB1-206ENST00000539320 NEXMIFQ5QGS0 1516 aa33.38■■■□□ 2.93
SCARB1-206ENST00000539320 KIF1BO60333 1816 aa33.37■■■□□ 2.93
SCARB1-206ENST00000539320 ROBO1Q9Y6N7 1651 aa33.36■■■□□ 2.93
SCARB1-206ENST00000539320 SLC4A1APQ9BWU0 796 aaKnown RBP33.36■■■□□ 2.93
SCARB1-206ENST00000539320 NCOA3Q9Y6Q9 1424 aa33.36■■■□□ 2.93
SCARB1-206ENST00000539320 PTPRUQ92729 1446 aa33.33■■■□□ 2.93
SCARB1-206ENST00000539320 XRN1Q8IZH2 1706 aaKnown RBP33.3■■■□□ 2.92
SCARB1-206ENST00000539320 AMOTL2Q9Y2J4 779 aa33.28■■■□□ 2.92
SCARB1-206ENST00000539320 C14orf37Q86TY3 774 aa33.27■■■□□ 2.92
SCARB1-206ENST00000539320 SOCS7O14512 581 aa33.25■■■□□ 2.91
SCARB1-206ENST00000539320 SLAIN2Q9P270 581 aa33.24■■■□□ 2.91
SCARB1-206ENST00000539320 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.22■■■□□ 2.91
SCARB1-206ENST00000539320 PHF23Q9BUL5 403 aaPredicted RBP33.22■■■□□ 2.91
SCARB1-206ENST00000539320 METP08581 1390 aa33.21■■■□□ 2.91
SCARB1-206ENST00000539320 C19orf44Q9H6X5 657 aa33.19■■■□□ 2.9
SCARB1-206ENST00000539320 FOXD1Q16676 465 aa33.17■■■□□ 2.9
SCARB1-206ENST00000539320 CADPS2Q86UW7 1296 aa33.17■■■□□ 2.9
SCARB1-206ENST00000539320 RPGRIP1LQ68CZ1 1315 aa33.16■■■□□ 2.9
SCARB1-206ENST00000539320 CCDC144AA2RUR9 1427 aa33.15■■■□□ 2.9
SCARB1-206ENST00000539320 PHLPP1O60346 1717 aa33.15■■■□□ 2.9
SCARB1-206ENST00000539320 ATF3P18847 181 aa33.15■■■□□ 2.9
SCARB1-206ENST00000539320 DCCP43146 1447 aa33.15■■■□□ 2.9
SCARB1-206ENST00000539320 PPLO60437 1756 aa33.14■■■□□ 2.9
SCARB1-206ENST00000539320 VGFO15240 615 aaPredicted RBP33.14■■■□□ 2.9
SCARB1-206ENST00000539320 MPHOSPH9Q99550 1183 aa33.13■■■□□ 2.89
SCARB1-206ENST00000539320 SETD1AO15047 1707 aaKnown RBP33.13■■■□□ 2.89
SCARB1-206ENST00000539320 SETD5Q9C0A6 1442 aa33.11■■■□□ 2.89
SCARB1-206ENST00000539320 ACIN1Q9UKV3 1341 aaKnown RBP33.08■■■□□ 2.89
SCARB1-206ENST00000539320 COL16A1Q07092 1604 aaPredicted RBP33.08■■■□□ 2.89
SCARB1-206ENST00000539320 ADGRL3Q9HAR2 1447 aa33.07■■■□□ 2.88
SCARB1-206ENST00000539320 AHDC1Q5TGY3 1603 aaPredicted RBP33.06■■■□□ 2.88
SCARB1-206ENST00000539320 PTCH1Q13635 1447 aa33.06■■■□□ 2.88
SCARB1-206ENST00000539320 JCADQ9P266 1359 aa33.05■■■□□ 2.88
SCARB1-206ENST00000539320 SPATA31E1Q6ZUB1 1445 aa33.04■■■□□ 2.88
SCARB1-206ENST00000539320 NALCNQ8IZF0 1738 aa33.03■■■□□ 2.88
SCARB1-206ENST00000539320 PRAG1Q86YV5 1406 aa33.02■■■□□ 2.88
SCARB1-206ENST00000539320 MST1RQ04912 1400 aa33.02■■■□□ 2.88
SCARB1-206ENST00000539320 RAB3GAP2Q9H2M9 1393 aa32.99■■■□□ 2.87
SCARB1-206ENST00000539320 ASXL1Q8IXJ9 1541 aa32.98■■■□□ 2.87
SCARB1-206ENST00000539320 BRINP3Q76B58 766 aa32.98■■■□□ 2.87
SCARB1-206ENST00000539320 IFT172Q9UG01 1749 aa32.98■■■□□ 2.87
SCARB1-206ENST00000539320 ROBO2Q9HCK4 1378 aa32.97■■■□□ 2.87
SCARB1-206ENST00000539320 ANKRD30BQ9BXX2 1392 aa32.96■■■□□ 2.87
SCARB1-206ENST00000539320 RGL3Q3MIN7 710 aa32.96■■■□□ 2.87
SCARB1-206ENST00000539320 ADGRF5Q8IZF2 1346 aa32.94■■■□□ 2.86
SCARB1-206ENST00000539320 RGS17Q9UGC6 210 aaPredicted RBP32.93■■■□□ 2.86
SCARB1-206ENST00000539320 SHPRHQ149N8 1683 aa32.9■■■□□ 2.86
SCARB1-206ENST00000539320 NHSL1Q5SYE7 1610 aa32.89■■■□□ 2.86
SCARB1-206ENST00000539320 PIK3C2GO75747 1445 aa32.87■■■□□ 2.85
SCARB1-206ENST00000539320 SPATA31A6Q5VVP1 1343 aa32.86■■■□□ 2.85
SCARB1-206ENST00000539320 LRP6O75581 1613 aa32.84■■■□□ 2.85
SCARB1-206ENST00000539320 C1orf167Q5SNV9 1468 aa32.84■■■□□ 2.85
SCARB1-206ENST00000539320 TECPR2O15040 1411 aa32.83■■■□□ 2.85
SCARB1-206ENST00000539320 LRPPRCP42704 1394 aaKnown RBP32.81■■■□□ 2.84
SCARB1-206ENST00000539320 MYOM2P54296 1465 aa32.8■■■□□ 2.84
SCARB1-206ENST00000539320 KNDC1Q76NI1 1749 aa32.8■■■□□ 2.84
SCARB1-206ENST00000539320 CDC42BPGQ6DT37 1551 aa32.79■■■□□ 2.84
SCARB1-206ENST00000539320 POTEAQ6S8J7 498 aa32.77■■■□□ 2.84
SCARB1-206ENST00000539320 NRXN1Q9ULB1 1477 aa32.77■■■□□ 2.84
SCARB1-206ENST00000539320 LAMC1P11047 1609 aa32.74■■■□□ 2.83
SCARB1-206ENST00000539320 ABCC11Q96J66 1382 aa32.74■■■□□ 2.83
SCARB1-206ENST00000539320 MEX3CQ5U5Q3 659 aaKnown RBP32.74■■■□□ 2.83
SCARB1-206ENST00000539320 STK26Q9P289 416 aa32.74■■■□□ 2.83
SCARB1-206ENST00000539320 DDX17Q92841 729 aaKnown RBP32.73■■■□□ 2.83
SCARB1-206ENST00000539320 YTHDC2Q9H6S0 1430 aaKnown RBP32.72■■■□□ 2.83
SCARB1-206ENST00000539320 TMEM132EQ6IEE7 984 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms