RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
KNTC1-210ENST00000539013 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
KNTC1-210ENST00000539013 PRDM2Q13029 1718 aa8.83□□□□□ -1
KNTC1-210ENST00000539013 CLIP1P30622 1438 aa8.83□□□□□ -1
KNTC1-210ENST00000539013 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
KNTC1-210ENST00000539013 A0A0G2JS52 829 aa8.82□□□□□ -1
KNTC1-210ENST00000539013 PRXQ9BXM0 1461 aa8.82□□□□□ -1
KNTC1-210ENST00000539013 VPS8Q8N3P4 1428 aa8.81□□□□□ -1
KNTC1-210ENST00000539013 CUX1P39880 1505 aa8.81□□□□□ -1
KNTC1-210ENST00000539013 NBPF26B4DH59 902 aa8.81□□□□□ -1
KNTC1-210ENST00000539013 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
KNTC1-210ENST00000539013 RAPGEF2Q9Y4G8 1499 aa8.81□□□□□ -1
KNTC1-210ENST00000539013 WBP1LQ9NX94 342 aa8.8□□□□□ -1
KNTC1-210ENST00000539013 KIF27Q86VH2 1401 aa8.8□□□□□ -1
KNTC1-210ENST00000539013 HPS5Q9UPZ3 1129 aa8.79□□□□□ -1
KNTC1-210ENST00000539013 CADPSQ9ULU8 1353 aa8.78□□□□□ -1
KNTC1-210ENST00000539013 TATDN2Q93075 761 aa8.78□□□□□ -1
KNTC1-210ENST00000539013 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
KNTC1-210ENST00000539013 PPP4CP60510 307 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 KCNC4Q03721 635 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 P3H3Q8IVL6 736 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 TTC13Q8NBP0 860 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
KNTC1-210ENST00000539013 HDGFP51858 240 aaKnown RBP8.75□□□□□ -1.01
KNTC1-210ENST00000539013 CCER1Q8TC90 406 aaPredicted RBP8.75□□□□□ -1.01
KNTC1-210ENST00000539013 KCNV2Q8TDN2 545 aa8.75□□□□□ -1.01
KNTC1-210ENST00000539013 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
KNTC1-210ENST00000539013 NECTIN2Q92692 538 aa8.74□□□□□ -1.01
KNTC1-210ENST00000539013 NPDC1Q9NQX5 325 aaPredicted RBP8.74□□□□□ -1.01
KNTC1-210ENST00000539013 SMAPO00193 183 aa8.73□□□□□ -1.01
KNTC1-210ENST00000539013 NUDT18Q6ZVK8 323 aa8.73□□□□□ -1.01
KNTC1-210ENST00000539013 KDM2AQ9Y2K7 1162 aa8.73□□□□□ -1.01
KNTC1-210ENST00000539013 CC2D2AQ9P2K1 1620 aa8.72□□□□□ -1.01
KNTC1-210ENST00000539013 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
KNTC1-210ENST00000539013 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
KNTC1-210ENST00000539013 ARAP1Q96P48 1450 aa8.7□□□□□ -1.02
KNTC1-210ENST00000539013 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
KNTC1-210ENST00000539013 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
KNTC1-210ENST00000539013 CUX2O14529 1486 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 IGF1RP08069 1367 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 FGD5Q6ZNL6 1462 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
KNTC1-210ENST00000539013 PTGDRQ13258 359 aa8.66□□□□□ -1.02
KNTC1-210ENST00000539013 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
KNTC1-210ENST00000539013 EYA1Q99502 592 aa8.66□□□□□ -1.02
KNTC1-210ENST00000539013 MAP3K1Q13233 1512 aa8.65□□□□□ -1.02
KNTC1-210ENST00000539013 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
KNTC1-210ENST00000539013 IL21Q9HBE4 155 aa8.65□□□□□ -1.02
KNTC1-210ENST00000539013 LAMC3Q9Y6N6 1575 aa8.65□□□□□ -1.03
KNTC1-210ENST00000539013 ARHGAP35Q9NRY4 1499 aa8.64□□□□□ -1.03
KNTC1-210ENST00000539013 CARMIL1Q5VZK9 1371 aa8.64□□□□□ -1.03
KNTC1-210ENST00000539013 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
KNTC1-210ENST00000539013 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
KNTC1-210ENST00000539013 RNF40O75150 1001 aa8.63□□□□□ -1.03
KNTC1-210ENST00000539013 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
KNTC1-210ENST00000539013 ABCA10Q8WWZ4 1543 aa8.63□□□□□ -1.03
KNTC1-210ENST00000539013 RBM46Q8TBY0 533 aaKnown RBP8.62□□□□□ -1.03
KNTC1-210ENST00000539013 MTRQ99707 1265 aa8.62□□□□□ -1.03
KNTC1-210ENST00000539013 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
KNTC1-210ENST00000539013 RRBP1Q9P2E9 1410 aaKnown RBP8.62□□□□□ -1.03
KNTC1-210ENST00000539013 DNAJB2P25686 324 aa8.61□□□□□ -1.03
KNTC1-210ENST00000539013 TOPBP1Q92547 1522 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 CUL7Q14999 1698 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
KNTC1-210ENST00000539013 FCHSD2O94868 740 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 APLP1P51693 650 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 SMYD5Q6GMV2 418 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 FHAD1B1AJZ9 1412 aa8.6□□□□□ -1.03
KNTC1-210ENST00000539013 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
KNTC1-210ENST00000539013 SEMA3EO15041 775 aa8.59□□□□□ -1.03
KNTC1-210ENST00000539013 BCANQ96GW7 911 aa8.59□□□□□ -1.03
KNTC1-210ENST00000539013 ADGRG1Q9Y653 693 aa8.59□□□□□ -1.03
KNTC1-210ENST00000539013 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
KNTC1-210ENST00000539013 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
KNTC1-210ENST00000539013 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
KNTC1-210ENST00000539013 TIAM1Q13009 1591 aa8.56□□□□□ -1.04
KNTC1-210ENST00000539013 RANGAP1P46060 587 aaPredicted RBP8.56□□□□□ -1.04
KNTC1-210ENST00000539013 WDR97A6NE52 1622 aa8.55□□□□□ -1.04
KNTC1-210ENST00000539013 TESPA1A2RU30 521 aaPredicted RBP8.55□□□□□ -1.04
KNTC1-210ENST00000539013 HIC1Q14526 733 aa8.55□□□□□ -1.04
KNTC1-210ENST00000539013 CCNB3Q8WWL7 1395 aa8.55□□□□□ -1.04
KNTC1-210ENST00000539013 AQRO60306 1485 aaKnown RBP eCLIP8.55□□□□□ -1.04
KNTC1-210ENST00000539013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.54□□□□□ -1.04
KNTC1-210ENST00000539013 OATP04181 439 aa8.54□□□□□ -1.04
KNTC1-210ENST00000539013 GGCXP38435 758 aa8.54□□□□□ -1.04
KNTC1-210ENST00000539013 LAPTM4AQ15012 233 aa8.54□□□□□ -1.04
KNTC1-210ENST00000539013 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
KNTC1-210ENST00000539013 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
KNTC1-210ENST00000539013 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
KNTC1-210ENST00000539013 ZNF516Q92618 1163 aa8.54□□□□□ -1.04
KNTC1-210ENST00000539013 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.54□□□□□ -1.04
KNTC1-210ENST00000539013 RAD54L2Q9Y4B4 1467 aa8.53□□□□□ -1.04
KNTC1-210ENST00000539013 RCCD1A6NED2 376 aa8.53□□□□□ -1.04
KNTC1-210ENST00000539013 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
KNTC1-210ENST00000539013 V9GY48 417 aaPredicted RBP8.53□□□□□ -1.04
KNTC1-210ENST00000539013 NESP48681 1621 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms